LOC122360901


Basic Information

Item Value
gene id LOC122360901
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056700.1
NCBI id CM032069.1
chromosome length 25613461
location 2453850 ~ 2461222 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043261741.1
ATGAAGGTGGTGCTGCTGGCGGTGCTGTTGGTGTTGGCGGCGTGGGCAGATACGGCCCAGGCCCAGAAAGCTCTGAGACTCTGTGGCCGAGAGTTTTTTCGGGCGGTCGTGTACACGTGCGGGGGTTCCAGATGGAGGCGGTTCCAAACCGAGGACCCCTTAAATGaagttcattctggaTTGGGCAGAGGGaaagccaatcaggatgtagatttcatgttCGTGCTTCCATTTCGAGGGATCAACTTGGTTAAAGAGCAGCGGTATAGTCTTCACAAACTTCTTCTGACCGTCTACCCCGAGCTTCAATATCTGGATTCAAAGATTTATGCAGAGTGtaaagttgtgttcatctttgatggtttggatgaaagcagaatTTCACTCTTTTCAGACACTGACACAGTTTCTGATGTGAACGAGGTTTCATCAGTGGGTGTGCTGATaccagcagcagccagtcAGATCCCCTCACAATACATCAACCGTGTGACTGAAATTCAGGGATTCAATGACTCTCAGAAGGAACAGTATTTCAGAAAGAGAATCAGCGACAAGCATCAATCAGCTGACTGCCCCCTCAGAGAGCTGGActtgagtaacaatgacctgcgggattcaggagtgaagctgctctgtgATGGACTGAAGAATCCTAACTGTCAACTAGAAATACTCAGAttgtctggctgtatggtgacagaggaagggTGCTCATACTTGACatcagctctgagttcaaacccctcacacctgagagagctggatctgagctacagtCACCCAGGAGATTCAGGACTGAAGTTGCTCTCAGATCTACTGCAGGATCCAAACATCAAGTTGGAGAAACTGAAGCACCTAATCACACCTGGTCTTTGGAAATATTCAAGTGCTATCACATTGGATCCAAACACGGCACACACTCAGCTCATCCTGTCTGAGGGCTACACAAAAGTGACATATGTGAAGGAGAAGCAATCGTATCCTGACCATCCAGAGAGATTTGAGAGCTTTGAGCAGGTTCTGAGCAGAGAGAGCCTGTCTGGACGCTGTTACTTGGAGGCTGAATGGAGCGGACAGGCTGTTATAGCTGTGTCGTATAAAGAAATCAGCAGGAAAGGAGGAAGAGAATGTCGGTTTGGACTCAATGACAAGTCTTGGATTCTGTTCAGCTCTGATAACAGATTTACTGCCTGTCATAATAATAAGAGGAGGGACGTACCTGCCCCTTCACCTCTGTCTACTAGAGTCGGCCTGTTTGTAGACTGGCTGGGTGGctttctgtccttctacagcgtctctgacacactcacacacttacacacattttaCTGCACTTTCACTGAGCCTCTCTATGCAGGCTTTTTACTCGACTTGGGATCCTCAGCATCTCTGTACCTGTCGGGAACAACAGGGACAACCGACACACAACTGGccCTTAGTGACTTCATTTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043261741.1 True 1455 mRNA 0.48 8 2453850 2461222

Neighbor

gene id symbol gene type direction distance location
LOC122358704 cmpk,cmpk1,LOC107719256,LOC107681787,LOC107671754,LOC107559368,LOC107709354 coding upstream 22393 2427557 ~ 2431457 (+)
LOC122358767 tsen15,LOC107735630,LOC107681748 coding upstream 62398 2390878 ~ 2391452 (+)
LOC122358683 fam78ba,LOC107593884,LOC107681754,LOC107709346,LOC107671676,LOC105891364,LOC107102035,LOC101481240 coding upstream 126407 2322711 ~ 2327443 (+)
bcl6ab LOC107593779,LOC107681786,LOC107559367,LOC107709352,LOC107671762,LOC107719257 coding upstream 137747 2309537 ~ 2316103 (+)
LOC122326129 tctex1d1,LOC107709344,LOC107719283 coding upstream 160355 2291463 ~ 2293495 (+)
LOC122360938 LOC107593781,LOC107719259,LOC107709351,LOC107671695,LOC107559342 coding downstream 34721 2495943 ~ 2510010 (+)
imp3 imp3,LOC107671714,LOC107681808 coding downstream 80693 2541915 ~ 2544563 (+)
abi1b abi1b,LOC107671751,LOC107559371,LOC107681778 coding downstream 101955 2563177 ~ 2581265 (+)
ap2m1a ap2m1a,ap2m1b,ap2m1,LOC107671693,LOC107593770,LOC107709357,LOC107602122 coding downstream 137546 2598768 ~ 2606856 (+)
dvl3a dvl3a,LOC107681796,LOC107671749,LOC107559372,LOC108430757 coding downstream 159620 2620842 ~ 2632556 (+)
G8737 NA non-coding upstream 8650 2443588 ~ 2445200 (+)
G8716 NA non-coding upstream 132663 2288286 ~ 2321187 (+)
G8717 NA non-coding upstream 163810 2288825 ~ 2290040 (+)
G8703 NA non-coding upstream 200259 2249222 ~ 2253591 (+)
G8707 NA non-coding upstream 226599 2226905 ~ 2227251 (+)
G8724 NA non-coding downstream 50400 2511622 ~ 2609519 (+)
G8764 NA non-coding downstream 151300 2612522 ~ 2613104 (+)
G8794 NA non-coding downstream 357850 2819072 ~ 2872749 (+)
G8816 NA non-coding downstream 451069 2912291 ~ 2912787 (+)
G9022 prtfdc1,LOC107711679,LOC107558005,LOC107671666,LOC104918289 non-coding downstream 655626 3116848 ~ 3121053 (+)
LOC122358652 slc35a3b,LOC107559354,LOC107593843,LOC107671667,LOC107709347 other upstream 33895 2406742 ~ 2419955 (+)
G8725 sec22ba,LOC107681807,LOC107727533,LOC107709355,LOC107671713,LOC107559355,LOC105891393 other upstream 52105 2398954 ~ 2401745 (+)
sgip1b sgip1b,LOC107719259,LOC107593781,LOC107709351,LOC107671695,LOC107559342,LOC107681818,LOC108430747 other upstream 165634 2270679 ~ 2288216 (+)
LOC122358138 LOC107593886,LOC107719261,LOC107671769,LOC107559363,LOC107754779,LOC107681703,LOC106568718 other upstream 262402 2178766 ~ 2191448 (+)
arl14 arl14,LOC107722413,LOC107719289 other upstream 517091 1933512 ~ 1936759 (+)
zgc:55943 zgc:55943,LOC107727521,LOC107671715,LOC107709356,LOC107559369,LOC107593773,LOC108430752 other downstream 86844 2548066 ~ 2555321 (+)
G8760 NA other downstream 130412 2591634 ~ 2592758 (+)
LOC122355548 NA other downstream 155985 2617207 ~ 2669943 (+)
LOC122328998 NA other downstream 156780 2618002 ~ 2618134 (+)
LOC122329004 NA other downstream 157094 2618316 ~ 2618449 (+)

Expression


Co-expression Network