LOC122361145 (dbt,LOC107681723,LOC107715513,LOC107593857,LOC108411488)


Basic Information

Item Value
gene id LOC122361145
gene name dbt,LOC107681723,LOC107715513,LOC107593857,LOC108411488
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056700.1
NCBI id CM032069.1
chromosome length 25613461
location 1591993 ~ 1598263 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043262111.1
CTCAACACCACTCGCGATTCGCGGTGACAGGAAGTCCTGCTTCGCTTTACCCCCGCGAAAACagtttctgttaaataataagcGGTTGTAGCATTGCGTTATGGTTGATTCTGTGTTACAGACTGCTGTTGTGTGCTCGCTGAGCTGATCGTCCACATCGCGGGGTTCCAGGATGTTGATATGTAGTGAGAGATCTCCCTCGTGTATCATCTCTGTGAGAGTCTTGGGCGAACATGGCGGCGGTGACACCAGTTCGATGTTCTCTGAGAATCCTGAGACGTCTGCCCCGGGTTGTATCCCATCGCCTCCAGCAGTGGCCCAGGCTCCAGGCTCTTGGACCGGCCCCTGTGTTTCACATCTCCACTCCCCTCACTTcagtccactggagaggcttcAGATGCAGCCAGGTGGCCTCTGGACAGGTGCTGCAGTTTAAACTCTCGGACATTGGAGAGGGCATAATGGAAGTGACGGTGAAAGAGTGGTATGTGAAGGAAGGGGACAGAGTCTCTCAGTTTGACAGCATTTGTGAAGTCCAGAGCGACAAAGCGTCCGTCACCATCACGAGCCGCTACGACGGCATCATCCGTAAGCTGTATTACGACGTAGATGCCATCGCACATGTTGGTACGCCTCTTGTGGACATCGAAACGGACAAAGCCCTGGAGGGCGCCCCAGAGGAAGACGTGGTGGAGACTCCGGCAGTATCCCATCAGCAATCGCATCAGGAAATCAAGGGCCAGAAAACCCAGGCGACACCAGCGGTGCGCCGTCTGGCCATGGAGAACAATATTAAACTGAGCGAGGTGGTCGGGACGGGAAAAGACGGACGTATTTTGAAAGAGGATATTATCAATTTCTTAGCCAAGCAGACTGGAGCTATCCTCCCGTATGAAGTCCAGAAAAGCCCATCACCCGCTGCAGACACCCCACCCAAAGAAAAGACGCCCGTCATGGCTCCTCCGGCGACCCCGAGACCCGTCTTCACTGGGAAAGACAGAGCAGAGCCTCTGAACGGTTTCCAGAAGGCCATGGTGAAGACCATGACTGCTGCTCTGAAGATTCCTCACTTCGGTTACTGTGACGAGGTGGACCTGACGCAGCTGGTGCGGTTACGCTCAGAGCTGAAGGAGCTGGCGGAGTCTCGAGGTGTCAAGCTCAGCTACATGCCTTTCTTCATCAAGGCCGCGTCCCTGGGGCTCTTGCAGTTTCCTGTTCTCAATGCCTCTGTGGATGAAGGCTGTCAGAACATCACATTCAAGGCATCTCATAACATCGGGCTGGCGATGGACACTCCTCAGGGCCTCCTGGTGCCCAATGTGAAGAGCGTACAGGCCCTCAGTGTTTTTGACATTGCTGTGGAGCTCAACCGTCTGCAGCTTCTGGGTTCATCCGGACAATTGGGCACCTCTGACCTCACCGGAGGAACCTTCACCCTCTCCAACATCGGCTCGatTGGAGGGACGTATGCCAAGCCGGTGATTCTGCCCCCGGAGGTGGCCATCGGAGCTTTGGGAAAGATCCAGGTGCTGCCCAGGTTTAACTCCTGTGACGAGGTAGTGAAGGCACACATCATGAATGTCAGCTGGTCTGCCGATCATCGCATCATTGACGGCGCCACCATGGCCCGCTTCTCAAACCTGTGGCGCTCTTACCTGGAGAACCCAGCTTCCATGGTCCTGGATCTCAAATGAACACTTCCCTGGAAATCAAATCCCTCTGTCCGTCACTTCCTGCAGTGTCTTTACGTGTCGTGCCTATCATGTGAACACTCGAGCATCTGCTTTCACGTTCATCTTTGTTTCTCAAACAACTTTAAATTCCTTCTCTCGTTGCCTTAATTAAAAGCGGTTACGGTAACTTTGCATTGCAAAACACTCACCGTATGCTTTTGGAAATGCTGTTATGTAGCAGGGTtgaacatttcaaattttcattGTCTTGCTGTACACCAAGTCTGAAGTCTCAAATCACCCATAGGTTTTTCTGATGCCTTGTGTACGGAGGACGGAGGCTGATACTGACTGAATCTGTACCGTAGCGTCTCATTGTCTGCTGACTTTCTCTGAGACTTCATTCACACAAGCCTCTGTTGAGCTGACAGACAGCCACTTCATCTAAAACCACTTGCGTGCCAGCAATTGTGAAGAAAGGACCACCATTTAACTGTTAAAAGAACAAATGGACCACACATGTATAGATTATTAAATTTTGAgtagaataaatgttttatggcaA

Function

symbol description
dbt Predicted to enable acetyltransferase activity and lipoic acid binding activity. Acts upstream of or within branched-chain amino acid metabolic process. Predicted to be active in mitochondrion. Is expressed in brain; gut; intestine; liver; and muscle. Used to study maple syrup urine disease. Human ortholog(s) of this gene implicated in maple syrup urine disease. Orthologous to human DBT (dihydrolipoamide branched chain transacylase E2).

NR:

description
PREDICTED: lipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex, mitochondrial-like

GO:

id name namespace
GO:0009081 branched-chain amino acid metabolic process biological_process
GO:0046949 fatty-acyl-CoA biosynthetic process biological_process
GO:0048037 obsolete cofactor binding molecular_function
GO:0043754 dihydrolipoyllysine-residue (2-methylpropanoyl)transferase activity molecular_function

KEGG:

id description
K09699 DBT, bkdB; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase)

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043262111.1 True 2238 mRNA 0.52 11 1591993 1598263

Neighbor

gene id symbol gene type direction distance location
extl2 extl2,LOC107722455 coding upstream 23451 1563005 ~ 1568542 (+)
zgc:153115 zgc:153115,LOC107722210,LOC107701340,LOC107681793,LOC105889440,LOC105030379,LOC106568757 coding upstream 66419 1517697 ~ 1525574 (+)
asip2b agrp2,LOC107593895,LOC107715506,LOC107701329,LOC107681750,LOC107722688,LOC107568624 coding upstream 119144 1469060 ~ 1472849 (+)
LOC122360630 LOC107681692 coding upstream 144094 1440938 ~ 1447899 (+)
dcun1d1 dcun1d1,LOC107681826,LOC107568628,LOC107722250,LOC107708830,LOC105889496 coding upstream 195815 1390712 ~ 1396178 (+)
rgs18 rgs18,LOC107681733,LOC107715502,LOC107701327,LOC107560778,LOC107722673 coding downstream 249823 1848086 ~ 1855235 (+)
rgs1 LOC107681696,LOC107560781,LOC107701325,LOC107722662 coding downstream 266242 1864505 ~ 1867191 (+)
rgs13 LOC107715509,LOC107593894,LOC107681737,LOC107560784,LOC107722654,LOC107701324 coding downstream 275759 1874022 ~ 1876886 (+)
si:dkey-119f1.1 si:dkey-119f1.1,LOC107593797,LOC107701334,LOC107722422,LOC107560764 coding downstream 282428 1880691 ~ 1901747 (+)
ppm1la ppm1l,ppm1la,LOC107681725,LOC107722109,LOC107701333,LOC100694563,LOC103365160 coding downstream 324789 1923052 ~ 1932630 (+)
G8469 LOC107715522,LOC107681815,LOC108437516,LOC108267691 non-coding upstream 166698 1407651 ~ 1425295 (+)
G8449 NA non-coding upstream 206007 1383892 ~ 1385986 (+)
G8451 NA non-coding upstream 209670 1382119 ~ 1382323 (+)
G8393 dia1a,LOC107599840,LOC107681802,LOC107722302,LOC107565821,LOC107679841 non-coding upstream 388979 1197427 ~ 1203014 (+)
G8394 NA non-coding upstream 405961 1180130 ~ 1186032 (+)
G8508 NA non-coding downstream 783 1599046 ~ 1673755 (+)
G8519 nos1apb,LOC107715504,LOC107593855,LOC107681742,LOC107560777,LOC107701337 non-coding downstream 34053 1632316 ~ 1636622 (+)
G8556 NA non-coding downstream 83164 1681427 ~ 1683093 (+)
G8585 LOC107701323,LOC107593893,LOC107719279,LOC107560771,LOC107722646 non-coding downstream 320443 1918706 ~ 1919313 (+)
G8586 NA non-coding downstream 321149 1919412 ~ 1922223 (+)
rc3h1b LOC107681708,LOC107560775,LOC107722144 other upstream 32219 1544773 ~ 1559774 (+)
ccdc39 ccdc39,LOC107722234,LOC107701322,LOC107708988,LOC107568623 other upstream 183272 1397524 ~ 1408721 (+)
st6galnac5a st6galnac5a,LOC107681827,LOC107708707,LOC107599846,LOC107751866 other upstream 763588 799932 ~ 828405 (+)
LOC122360757 fam73b,miga2,miga1,LOC107599369,LOC107705989,LOC107675762,LOC107737175,LOC107661559,LOC107708777,LOC107681767,LOC107722319,LOC107703235,LOC107558173 other upstream 1134248 447162 ~ 457745 (+)
LOC122325097 fuz,LOC107708997,LOC107691039 other upstream 1346629 241451 ~ 245364 (+)
LOC122360854 si:dkey-119f1.1,LOC107593796,LOC107715495,LOC107719281,LOC107701334,LOC107681697,LOC107593797,LOC108443183 other downstream 304804 1903067 ~ 1910679 (+)
arl14 arl14,LOC107722413,LOC107719289 other downstream 335249 1933512 ~ 1936759 (+)
LOC122358138 LOC107593886,LOC107719261,LOC107671769,LOC107559363,LOC107754779,LOC107681703,LOC106568718 other downstream 580503 2178766 ~ 2191448 (+)
sgip1b sgip1b,LOC107719259,LOC107593781,LOC107709351,LOC107671695,LOC107559342,LOC107681818,LOC108430747 other downstream 672416 2270679 ~ 2288216 (+)
G8725 sec22ba,LOC107681807,LOC107727533,LOC107709355,LOC107671713,LOC107559355,LOC105891393 other downstream 800691 2398954 ~ 2401745 (+)

Expression


Co-expression Network