LOC122328998


Basic Information

Item Value
gene id LOC122328998
gene name NA
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056700.1
NCBI id CM032069.1
chromosome length 25613461
location 2618002 ~ 2618134 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XR_006247876.1
TGCCTTTGTGTTGCCCATTCATTTCCCATTAGATGAATGTGGTGTCTACTTGGGCATACAATAAATCTTGACGTGGCCTAATTTGAGAGAACACCTAATTGTTTCTCTTGCTTGTGCTATGACAAGAACAGCT

Function

GO:

id name namespace
GO:0043603 cellular amide metabolic process biological_process
GO:0043604 amide biosynthetic process biological_process
GO:1901566 organonitrogen compound biosynthetic process biological_process
GO:0043043 peptide biosynthetic process biological_process
GO:0006412 translation biological_process
GO:0044271 cellular nitrogen compound biosynthetic process biological_process
GO:0006518 peptide metabolic process biological_process

KEGG:

id description
ko03010 Ribosome

RNA

RNA id representative length rna type GC content exon number start site end site
XR_006247876.1 True 133 snoRNA 0.41 1 2618002 2618134

Neighbor

gene id symbol gene type direction distance location
ap2m1a ap2m1a,ap2m1b,ap2m1,LOC107671693,LOC107593770,LOC107709357,LOC107602122 coding upstream 11146 2598768 ~ 2606856 (+)
abi1b abi1b,LOC107671751,LOC107559371,LOC107681778 coding upstream 36737 2563177 ~ 2581265 (+)
imp3 imp3,LOC107671714,LOC107681808 coding upstream 73439 2541915 ~ 2544563 (+)
LOC122360938 LOC107593781,LOC107719259,LOC107709351,LOC107671695,LOC107559342 coding upstream 107992 2495943 ~ 2510010 (+)
LOC122360901 NA coding upstream 156780 2453850 ~ 2461222 (+)
dvl3a dvl3a,LOC107681796,LOC107671749,LOC107559372,LOC108430757 coding downstream 2708 2620842 ~ 2632556 (+)
LOC122328513 LOC107727546,LOC107671763,LOC107559376,LOC107709337 coding downstream 26861 2644995 ~ 2657785 (+)
ahsg2 LOC107727545,LOC107681805,LOC107577584,LOC107559377 coding downstream 40269 2658403 ~ 2661029 (+)
LOC122323799 LOC107681838,LOC107709342,LOC107593839,LOC108430687,LOC103043726,LOC105899208 coding downstream 77287 2695421 ~ 2701972 (+)
vps4b vps4b,LOC107710065,LOC107681797,LOC107727524,LOC107671729 coding downstream 99439 2717573 ~ 2729493 (+)
G8764 NA non-coding upstream 4898 2612522 ~ 2613104 (+)
G8724 NA non-coding upstream 8483 2511622 ~ 2609519 (+)
G8737 NA non-coding upstream 172802 2443588 ~ 2445200 (+)
G8716 NA non-coding upstream 296815 2288286 ~ 2321187 (+)
G8794 NA non-coding downstream 200938 2819072 ~ 2872749 (+)
G8816 NA non-coding downstream 294157 2912291 ~ 2912787 (+)
G9022 prtfdc1,LOC107711679,LOC107558005,LOC107671666,LOC104918289 non-coding downstream 498714 3116848 ~ 3121053 (+)
G9130 ipp non-coding downstream 905136 3523270 ~ 3524571 (+)
G9141 NA non-coding downstream 945574 3563708 ~ 3564239 (+)
G8760 NA other upstream 25244 2591634 ~ 2592758 (+)
zgc:55943 zgc:55943,LOC107727521,LOC107671715,LOC107709356,LOC107559369,LOC107593773,LOC108430752 other upstream 62681 2548066 ~ 2555321 (+)
LOC122358652 slc35a3b,LOC107559354,LOC107593843,LOC107671667,LOC107709347 other upstream 198047 2406742 ~ 2419955 (+)
G8725 sec22ba,LOC107681807,LOC107727533,LOC107709355,LOC107671713,LOC107559355,LOC105891393 other upstream 216257 2398954 ~ 2401745 (+)
sgip1b sgip1b,LOC107719259,LOC107593781,LOC107709351,LOC107671695,LOC107559342,LOC107681818,LOC108430747 other upstream 329786 2270679 ~ 2288216 (+)
LOC122329004 NA other downstream 182 2618316 ~ 2618449 (+)
G8768 zbtb41,LOC107671738,LOC107559347,LOC107709336,LOC107681803 other downstream 17107 2635241 ~ 2636586 (+)
LOC122356587 tsc22d2,LOC107727513,LOC107681775,LOC103360179,LOC107559349 other downstream 57236 2675370 ~ 2689627 (+)
kdsr kdsr,LOC107681813,LOC107727538,LOC107671756,LOC102792240 other downstream 111502 2729636 ~ 2739907 (+)
gpr158b gpr158b,LOC107593759,LOC107711710,LOC107671743,LOC107727549 other downstream 504990 3123124 ~ 3164823 (+)

Expression


Co-expression Network