trnag-gcc_4


Basic Information

Item Value
gene id trnag-gcc_4
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056700.1
NCBI id CM032069.1
chromosome length 25613461
location 5977915 ~ 5977989 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>unassigned_transcript_188
gcggtccttggtggttcagtggtagaattctcgcctgccacgcgggagacccgggttcgattcccggccaatgct

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
unassigned_transcript_188 True 75 tRNA 0.63 1 5977915 5977989

Neighbor

gene id symbol gene type direction distance location
trnag-gcc_3 NA coding upstream 3129 5974715 ~ 5974786 (+)
trnag-gcc_2 NA coding upstream 6322 5971519 ~ 5971593 (+)
trnag-gcc_1 NA coding upstream 8191 5969650 ~ 5969724 (+)
LOC122361161 NA coding upstream 139282 5836648 ~ 5838633 (+)
sft2d3 sft2d3,LOC107705299,LOC107653510,LOC107737414 coding upstream 169367 5807171 ~ 5808548 (+)
trnag-gcc_5 NA coding downstream 3174 5981163 ~ 5981233 (+)
trnag-gcc_6 NA coding downstream 14099 5992088 ~ 5992158 (+)
trnag-gcc_7 NA coding downstream 20154 5998143 ~ 5998217 (+)
trnag-gcc_8 NA coding downstream 22626 6000615 ~ 6000689 (+)
trnag-gcc_9 NA coding downstream 26693 6004682 ~ 6004756 (+)
G9692 cldn15la,LOC107737418,LOC107550432,LOC107695160 non-coding upstream 117963 5852269 ~ 5859952 (+)
G9690 NA non-coding upstream 145225 5832357 ~ 5832690 (+)
G9667 proc,LOC107705314,LOC107653506,LOC107737413 non-coding upstream 146800 5770058 ~ 5831115 (+)
G9671 NA non-coding upstream 252899 5724701 ~ 5725016 (+)
G9663 NA non-coding upstream 260509 5717178 ~ 5717406 (+)
G9697 NA non-coding downstream 164053 6142042 ~ 6142865 (+)
G9758 NA non-coding downstream 398154 6376143 ~ 6376597 (+)
G9825 NA non-coding downstream 524401 6502390 ~ 6502594 (+)
G9827 NA non-coding downstream 534175 6512164 ~ 6512394 (+)
G9834 NA non-coding downstream 544816 6522805 ~ 6523467 (+)
dusp28 dusp28,LOC107737412,LOC107695162,LOC107653509,LOC107705300,LOC107564257 other upstream 151629 5823993 ~ 5826286 (+)
G9630 LOC107705308,LOC107564255,LOC107728403 other upstream 368639 5608327 ~ 5609276 (+)
LOC122355892 foxc1,foxc1a,LOC107745890,LOC107576425,LOC107726170,LOC107563085,LOC105019236 other upstream 1066739 4909129 ~ 4911176 (+)
LOC122361055 LOC107565287,LOC107667819 other upstream 1078535 4898372 ~ 4899380 (+)
mylk4a mylk4,LOC107671735,LOC107562868,LOC107708588 other upstream 1388088 4572945 ~ 4589827 (+)
trnag-gcc_20 NA other downstream 242437 6220426 ~ 6220500 (+)
trnag-gcc_21 NA other downstream 244456 6222445 ~ 6222519 (+)
sst2 LOC107549725,LOC107710806 other downstream 389188 6367177 ~ 6367954 (+)
G9887 NA other downstream 712383 6690372 ~ 6690779 (+)
G9889 NA other downstream 713679 6691668 ~ 6692375 (+)

Expression


Co-expression Network