trnag-gcc_5


Basic Information

Item Value
gene id trnag-gcc_5
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056700.1
NCBI id CM032069.1
chromosome length 25613461
location 5981163 ~ 5981233 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>unassigned_transcript_189
tccttggtggttcagtggtagaattctcgcctgccacgcgggagacccgggttcgattcccggccaatgct

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
unassigned_transcript_189 True 71 tRNA 0.60 1 5981163 5981233

Neighbor

gene id symbol gene type direction distance location
trnag-gcc_4 NA coding upstream 3174 5977915 ~ 5977989 (+)
trnag-gcc_3 NA coding upstream 6377 5974715 ~ 5974786 (+)
trnag-gcc_2 NA coding upstream 9570 5971519 ~ 5971593 (+)
trnag-gcc_1 NA coding upstream 11439 5969650 ~ 5969724 (+)
LOC122361161 NA coding upstream 142530 5836648 ~ 5838633 (+)
trnag-gcc_6 NA coding downstream 10855 5992088 ~ 5992158 (+)
trnag-gcc_7 NA coding downstream 16910 5998143 ~ 5998217 (+)
trnag-gcc_8 NA coding downstream 19382 6000615 ~ 6000689 (+)
trnag-gcc_9 NA coding downstream 23449 6004682 ~ 6004756 (+)
trnag-gcc_10 NA coding downstream 27101 6008334 ~ 6008408 (+)
G9692 cldn15la,LOC107737418,LOC107550432,LOC107695160 non-coding upstream 121211 5852269 ~ 5859952 (+)
G9690 NA non-coding upstream 148473 5832357 ~ 5832690 (+)
G9667 proc,LOC107705314,LOC107653506,LOC107737413 non-coding upstream 150048 5770058 ~ 5831115 (+)
G9671 NA non-coding upstream 256147 5724701 ~ 5725016 (+)
G9663 NA non-coding upstream 263757 5717178 ~ 5717406 (+)
G9697 NA non-coding downstream 160809 6142042 ~ 6142865 (+)
G9758 NA non-coding downstream 394910 6376143 ~ 6376597 (+)
G9825 NA non-coding downstream 521157 6502390 ~ 6502594 (+)
G9827 NA non-coding downstream 530931 6512164 ~ 6512394 (+)
G9834 NA non-coding downstream 541572 6522805 ~ 6523467 (+)
dusp28 dusp28,LOC107737412,LOC107695162,LOC107653509,LOC107705300,LOC107564257 other upstream 154877 5823993 ~ 5826286 (+)
G9630 LOC107705308,LOC107564255,LOC107728403 other upstream 371887 5608327 ~ 5609276 (+)
LOC122355892 foxc1,foxc1a,LOC107745890,LOC107576425,LOC107726170,LOC107563085,LOC105019236 other upstream 1069987 4909129 ~ 4911176 (+)
LOC122361055 LOC107565287,LOC107667819 other upstream 1081783 4898372 ~ 4899380 (+)
mylk4a mylk4,LOC107671735,LOC107562868,LOC107708588 other upstream 1391336 4572945 ~ 4589827 (+)
trnag-gcc_20 NA other downstream 239193 6220426 ~ 6220500 (+)
trnag-gcc_21 NA other downstream 241212 6222445 ~ 6222519 (+)
sst2 LOC107549725,LOC107710806 other downstream 385944 6367177 ~ 6367954 (+)
G9887 NA other downstream 709139 6690372 ~ 6690779 (+)
G9889 NA other downstream 710435 6691668 ~ 6692375 (+)

Expression


Co-expression Network