G94511


Basic Information

Item Value
gene id G94511
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056711.1
NCBI id CM032080.1
chromosome length 25085836
location 16984506 ~ 17015657 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU139834
aaagtaaaaaaaaaaaaaaaaaagacacgaaaaaaaatctacatattGTAAATACTTGGGCAGTAAAAAGTAGATACACAgcattttgtgttaaaataagaatatctgacaaaatatattttgtttacaaaactTTGATACGTGAGACTACACTTAAAGCATCTGTTAAatggtgtttatatattatcataCATGTCCATATTGCACGAGAGTCGTCGGAAAACTTGGTCCTCCCCTTGGCACAGACAGAGAGGTTGTAAGTAAATCTAGTCTGTCTCGACAGGGAGTAGAAGCAAAAAATTGAATAGAAATCATACAAGCATCTTAGAGTACATGTAAGACTGAATAACACATAATACTTGGTTTTGATCTCTCTCTCCTCCGTTTTGTTCTGTCCATCCCTCTGTCTCCGGCGCTGTGTCGTTTCACTGGTCCCTTGATTCATACAACAATTTGGC
>TU139837
agaaaaaaaaaaaaaaaaaaagacacgaaaaaaaatctacatattGTAAATACTTGGGCAGTAAAAAGTAGATACACAgcattttgtgttaaaataagaatatctgacaaaatatattttgtttacaaaactTTGATACGTGAGACTACACTTAAAGCATCTGTTAAatggtgtttatatattatcataCATGTCCATATTGCACGAGAGTCGTCGGAAAACTTGGTCCTCCCCTTGGCACAGACAGAGAGGTTGTAAGTAAATCTAGTCTGTCTCGACAGGGAGTAGAAGCAAAAAATTGAATAGAAATCATACAAGCATCTTAGAGTACATGTAAGACTGAATAACACATAATACTTGGTTTTGATCTCTCTCTCCTCCGTTTTGTTCTGTCCATCCCTCTGTCTCCGGCGCTGTGTCGTTTCACTGGTCCCTTGATTCATACAACAATTTGGC

Function

GO:

id name namespace
GO:0005634 nucleus cellular_component
GO:0043227 membrane-bounded organelle cellular_component
GO:0043231 intracellular membrane-bounded organelle cellular_component

KEGG:

id description
ko03460 Fanconi anemia pathway

RNA

RNA id representative length rna type GC content exon number start site end site
TU139834 True 458 lncRNA 0.35 2 16984506 17015657
TU139837 False 456 lncRNA 0.35 2 16984506 16992084

Neighbor

gene id symbol gene type direction distance location
fhip2a LOC107568115,LOC107679198,LOC107724610,LOC107734297,LOC107676387,LOC107575459 coding downstream 9017 16964295 ~ 16975489 (-)
ablim1a ablim1a,LOC107676391,LOC107724609 coding downstream 22027 16923937 ~ 16962479 (-)
LOC122356703 eif3s6ip,eif3l,LOC107679167,LOC107676390 coding downstream 152266 16827009 ~ 16832240 (-)
vsir LOC107679168,LOC107549146,LOC107724606,LOC107676381,LOC107568522 coding downstream 179365 16795555 ~ 16805141 (-)
LOC122356705 NA coding downstream 198878 16779594 ~ 16785628 (-)
LOC122356833 mdga1,LOC107679144,LOC107676363,LOC107561756 coding upstream 197276 17212933 ~ 17365849 (-)
LOC122356215 marveld1,LOC107564681,LOC107664302,LOC107736855,LOC107665576 coding upstream 531757 17547414 ~ 17548604 (-)
zfand3 zfand3,LOC107566515,LOC107679194,LOC107724624,LOC107734288,LOC107676388,LOC107561772 coding upstream 683280 17698937 ~ 17713567 (-)
trnav-cac_10 NA coding upstream 703450 17719107 ~ 17719179 (-)
trnav-aac_26 NA coding upstream 703977 17719634 ~ 17719706 (-)
G94455 mrpl14,LOC107676385,LOC107679189,LOC107734281 non-coding downstream 389775 16593425 ~ 16594731 (-)
G94453 mlh1 non-coding downstream 415256 16567915 ~ 16569250 (-)
G94425 NA non-coding downstream 465680 16515857 ~ 16518826 (-)
G94416 opn3,LOC107665579,LOC107747290,LOC107549142,LOC107549136,LOC107586115 non-coding downstream 552076 16430674 ~ 16432430 (-)
G94414 opn3,LOC107665579,LOC107549142,LOC107747290,LOC107719228 non-coding downstream 554213 16429841 ~ 16430293 (-)
G94516 NA non-coding upstream 6446 17022103 ~ 17030063 (-)
LOC122356952 NA non-coding upstream 616592 17632249 ~ 17672523 (-)
G94608 NA non-coding upstream 706071 17721728 ~ 17722300 (-)
G94619 NA non-coding upstream 775227 17790884 ~ 17791890 (-)
LOC122356989 NA non-coding upstream 876380 17892037 ~ 17900115 (-)
G94412 opn3,LOC107549142,LOC107665579,LOC107586115,LOC107747290,LOC107719228,LOC107676370 other downstream 557971 16425697 ~ 16426535 (-)
cisd1 cisd1,LOC107549159,LOC107747252,LOC107665600,LOC105902329,LOC108443718 other downstream 692127 16290154 ~ 16292379 (-)
pcdh15a pcdh15a,LOC108443650,LOC107586072 other downstream 815302 16009687 ~ 16169204 (-)
G94216 NA other downstream 1099284 15877527 ~ 15885222 (-)
LOC122356531 cnnm1,LOC107702746,LOC107719212,LOC107747260,LOC107601048,LOC107665556 other downstream 1190966 15774777 ~ 15793540 (-)
LOC122356193 slc35f4,slc35f3,LOC107664436,LOC107586844,LOC107559881,LOC107668528,LOC107747268,LOC107665565,LOC107664233,LOC107736862 other upstream 359093 17374750 ~ 17387006 (-)
LOC122356088 ate1,LOC107679187,LOC107655512 other upstream 1529914 18545571 ~ 18672893 (-)
LOC122357020 LOC107724613,LOC107679163,LOC107733343,LOC107585413,LOC107597639 other upstream 1942046 18957703 ~ 18975524 (-)
itga9 itga9,LOC107688464,LOC107679186,LOC107585444 other upstream 2270373 19286030 ~ 19362041 (-)
disc1 LOC107666898,LOC107730373 other upstream 2846873 19862530 ~ 19907062 (-)

Expression


Co-expression Network