G95520


Basic Information

Item Value
gene id G95520
gene name NA
gene type unknown
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056711.1
NCBI id CM032080.1
chromosome length 25085836
location 20479925 ~ 20486704 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU141250
gtttaaaacatcaaaagccCCTGATAAATCTGTCCGTGAGAAATGAGATATTTAGGAGATCTCTCTGGGGATGTGTTCAGAAATGAAGCGTAGCTGAACGAGTCTCGCTGTGTTTCAGAGGTGCAGCGTCCGTGGACCCGTGTCGTGTGGGCACCCATGACTGTGACGCGTCCCGAGCGCGCTCGCTGCAGCTACACCGGAGCATCGTCCTACATCTGCAGCTGCCTGCCCGGCTTCATGGGAGACGGACGCAGCTGTCAGGACATAGATGAGTGTCAGGTGAATCAGTGTCATGACGATGCCGtctgcctcaacacacctggaTCTTTCACCTGTCAGTGTAACCCTGGTTTCTATGGCGATGGTTTCTCCTGCTCTACAGGTCCTGGTCACGATGTCCCTCGCCCGATTGGACCAACGCCCGATCCTAACGTGAATCCTTTGCCTCCTGGCAGTCATATCCTCTTCGTCCAGAGCGGGAAGATCGAGTATATTCCTCTGGAAGGTCACAAACTGAAGAAGAACCAAGCCAAGACTGTACTGCATCTCCCGGAGAAAGTGGTGATCGGAATTGCTTATGACTGCGTGGAAAGATGGTGTATTGGACGGACATCAGCACACCTGCCATTAGCAAAGCTAGTCTACAGG
>TU141252
gtttaaaacatcaaaagccCCTGATAAATCTGTCCGTGAGAAATGAGATATTTAGGAGATCTCTCTGGGGATGTGTTCAGAAATGAAGCGTAGCTGAACGAGTCTCGCTGTGTTTCAGAGGTGCAGCGTCCGTGGACCCGTGTCGTGTGGGCACCCATGACTGTGACGCGTCCCGAGCGCGCTCGCTGCAGCTACACCGGAGCATCGTCCTACATCTGCAGCTGCCTGCCCGGCTTCATGGGAGACGGACGCAGCTGTCAGGACATAGATGAGTGTCAGGTGAATCAGTGTCATGACGATGCCGtctgcctcaacacacctggaTCTTTCACCTGTCAGTGTAACCCTGGTTTCTATGGCGATGGTTTCTCCTGCTCTACAGGTCCTGGTCACGATGTCCCTCGCCCGATTGGACCAACGCCCGATCCTAACGTGAATCCTTTGCCTCCTGGCAGTCATATCCTCTTCGTCCAGAGCGGGAAGATCGAGTATATTCCTCTGGAAGGTCACAAACTGAAGAAGAACCAAGCCAAGACTGTACTGCATCTCCCGGtaaaaacctcaaaaacatGCAGCGATTGCAACACATACGTGTGT

Function

GO:

id name namespace
GO:0044085 cellular component biogenesis biological_process
GO:0016072 rRNA metabolic process biological_process
GO:0022613 ribonucleoprotein complex biogenesis biological_process
GO:0034470 ncRNA processing biological_process
GO:0006364 rRNA processing biological_process
GO:0042254 ribosome biogenesis biological_process
GO:0034660 ncRNA metabolic process biological_process

KEGG:

id description
ko03008 Ribosome biogenesis in eukaryotes

RNA

RNA id representative length rna type GC content exon number start site end site
TU141250 True 648 TUCP 0.53 4 20479925 20486704
TU141252 False 597 TUCP 0.53 3 20481443 20486704

Neighbor

gene id symbol gene type direction distance location
lyst lyst,LOC107691204,LOC107728318,LOC107689764,LOC107569426 coding downstream 134243 20275777 ~ 20345682 (-)
b3galnt2 b3galnt2,LOC107730378,LOC107667096,LOC107728324 coding downstream 215672 20245487 ~ 20264253 (-)
arid4b arid4b,LOC107690809,LOC107557720,LOC107667027,LOC107728306 coding downstream 261025 20150458 ~ 20218900 (-)
tomm20a tomm20a,LOC107690811,LOC107728308,LOC107667141,LOC108247505 coding downstream 334457 20142549 ~ 20145468 (-)
LOC122357145 NA coding downstream 336198 20143596 ~ 20143727 (-)
eif2ak2 NA coding upstream 34943 20521647 ~ 20542635 (-)
LOC122356970 gpatch11,LOC107689758,LOC107562390,LOC107708600 coding upstream 56071 20542775 ~ 20546992 (-)
mypn LOC107689354,LOC107562382,LOC107750149,LOC107565072 coding upstream 85616 20572320 ~ 20595989 (-)
cacul1 cacul1,LOC107689372,LOC107562395 coding upstream 112020 20598724 ~ 20606506 (-)
sirt1 sirt1,LOC107565065,LOC106604510 coding upstream 120553 20607257 ~ 20616412 (-)
G95506 NA non-coding downstream 241698 20236678 ~ 20238227 (-)
LOC122356209 NA non-coding downstream 338967 20108191 ~ 20140958 (-)
G95469 NA non-coding downstream 403988 20075371 ~ 20075937 (-)
G95190 NA non-coding downstream 633391 19846301 ~ 19846534 (-)
LOC122356282 NA non-coding downstream 644272 19818053 ~ 19835653 (-)
G95519 NA non-coding upstream 28069 20514773 ~ 20515311 (-)
G95524 NA non-coding upstream 31896 20518600 ~ 20520093 (-)
G95537 NA non-coding upstream 133343 20620047 ~ 20620719 (-)
G95535 NA non-coding upstream 134558 20621262 ~ 20678269 (-)
G95549 NA non-coding upstream 342074 20828778 ~ 20829053 (-)
LOC122356211 gng4 other downstream 204539 20264726 ~ 20275386 (-)
LOC122357123 tsnax,LOC107557734,LOC107690806,LOC107564242,LOC107667162 other downstream 558256 19909195 ~ 19921669 (-)
disc1 LOC107666898,LOC107730373 other downstream 572863 19862530 ~ 19907062 (-)
itga9 itga9,LOC107688464,LOC107679186,LOC107585444 other downstream 1117884 19286030 ~ 19362041 (-)
LOC122357020 LOC107724613,LOC107679163,LOC107733343,LOC107585413,LOC107597639 other downstream 1504401 18957703 ~ 18975524 (-)
G95510 nid1,nid1a,LOC107691203,LOC107750138,LOC107728305,LOC107689759 other upstream 2081 20488785 ~ 20492076 (-)
G95511 NA other upstream 6938 20493642 ~ 20496864 (-)
G95526 NA other upstream 83334 20570038 ~ 20571562 (-)
G95646 adgra1,LOC107750141,LOC107567015,LOC107663568,LOC106903219,LOC107720869 other upstream 520768 21007472 ~ 21180217 (-)
LOC122357128 NA other upstream 1650684 22137388 ~ 22143970 (-)

Expression


Co-expression Network