G95936 (lbh)


Basic Information

Item Value
gene id G95936
gene name lbh
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056711.1
NCBI id CM032080.1
chromosome length 25085836
location 22296341 ~ 22297227 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU141836
agcactttcaAACGGTTTATTTACAGCCTCTGTCAGTCAGAGAGGAAGCGGTGTACATACAAAATAAGAGCAAACTCCCTGAGTCTTTACAGATGAACAGACGCTCTgcacagacaggaagtgattCTGTGACAGACCCACACCACAGACACTGACATCTACATACAAACACTGCGTGTGGACACAGAGACAGGATCCATAAAAACACGAGACACGGTCAGTTCTGCCGTGAATACAACAAATTCAGGAAGACAGCTGCGGTTCTCCTACAGATGACAGGAGGGATCAGAATGACACTTAAAGACGTCTTGCCCGTCATTCATCTACAGAATATTTACAGTCAAATCCACATACAACAATAATATGGTCAGGAAGATCGGTGTTACTCAGAAAAAGCATGTAAATGAGTGCAGGACAGACTCACACCATCATAATGAATCTTCTGACACACACTGATCATGTGCACTcgtcctcacacacacacacacacacacacacagaggtggGAATGAAGTCCGAGCGAGCGGATGTCAGTGGATCGGTTGTTCTGTATGTGCTGGTGTGATTGTCTATTCTATGTGTGTGATTCATGTCAGTAGATCCTCTCTAGCGCTGAGAGTTCTGCATCTGTCCATTCTGCAGGTTTCCGTCACACTCTTCctcgtcctcctcttcctcgctcACCAGGAACTCCTCGGGCGGCCAGCGCAGCTCCCCGCTCTCCACCTcgccctccgtcggctccaccacgaTCGACGGCAGACGGTCCTTCAGCTTACAGCAGCGCTCGAAGTCTGACGGGTCCGGGAAGAT
>TU141837
agcactttcaAACGGTTTATTTACAGCCTCTGTCAGTCAGAGAGGAAGCGGTGTACATACAAAATAAGAGCAAACTCCCTGAGTCTTTACAGATGAACAGACGCTCTgcacagacaggaagtgattCTGTGACAGACCCACACCACAGACACTGACATCTACATACAAACACTGCGTGTGGACACAGAGACAGGATCCATAAAAACACGAGACACGGTCAGTTCTGCCGTGAATACAACAAATTCAGGAAGACAGCTGCGGTTCTCCTACAGATGACAGGAGGGATCAGAATGACACTTAAAGACGTCTTGCCCGTCATTCATCTACAGAATATTTACAGTCAAATCCACATACAACAATAATATGGTCAGGAAGATCGGTGTTACTCAGAAAAAGCATGTAAATGAGTGCAGGACAGACTCACACCATCATAATGAATCTTCTGACACACACTGATCATGTGCACTcgtcctctcacacacacacacacacacacacacacacacagaggtggGAATGAAGTCCGAGCGAGCGGATGTCAGTGGATCGGTTGTTCTGTATGTGCTGGTGTGATTGTCTATTCTATGTGTGTGATTCATGTCAGTAGATCCTCTCTAGCGCTGAGAGTTCTGCATCTGTCCATTCTGCAGGTTTCCGTCACACTCTTCctcgtcctcctcttcctcgctcACCAGGAACTCCTCGGGCGGCCAGCGCAGCTCCCCGCTCTCCACCTcgccctccgtcggctccaccacgaTCGACGGCAGACGGTCCTTCAGCTTACAGCAGCGCTCGAAGTCTGACGGGTCCGGGAAGAT

Function

symbol description
lbh Acts upstream of or within embryonic viscerocranium morphogenesis and neural crest cell migration. Predicted to be located in cytoplasm. Predicted to be active in nucleus. Is expressed in several structures, including brain; digestive system; head; neural crest cell; and pleuroperitoneal region. Orthologous to human LBH (LBH regulator of WNT signaling pathway).

NR:

description
PREDICTED: protein LBH

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU141836 False 813 lncRNA 0.49 2 22296341 22297227
TU141837 True 821 TUCP 0.49 2 22296341 22297227

Neighbor

gene id symbol gene type direction distance location
zmp:0000000755 LOC107672344,LOC107742077,LOC103371009 coding downstream 12695 22254179 ~ 22283646 (-)
ptk7b LOC107672339,LOC107577581,LOC107742082 coding downstream 69337 22185040 ~ 22227004 (-)
srfb LOC107689574,LOC107570739 coding downstream 113167 22157665 ~ 22183174 (-)
pwwp2b pwwp2b,LOC107670800,LOC107754010,LOC107744923,LOC107653191 coding downstream 244655 22041455 ~ 22051686 (-)
LOC122356328 inpp5a,LOC107744939 coding downstream 271731 21908358 ~ 22024610 (-)
slc30a10 slc30a10,ypel5,LOC107672346,LOC107601641,LOC107568027,LOC107683860,LOC107568031 coding upstream 20013 22317240 ~ 22323509 (-)
LOC122356263 ypel5,slc30a10,slc30a1b,LOC107568027,LOC107672346,LOC107601641 coding upstream 188062 22485289 ~ 22489323 (-)
LOC122356266 LOC107671403,LOC107756883,LOC107688264,LOC107592480,LOC107592170 coding upstream 505491 22802718 ~ 22819457 (-)
c1d c1d,LOC107551342,LOC107754748,LOC107717833,LOC107702672,LOC107660245 coding upstream 837591 23134818 ~ 23136642 (-)
LOC122356317 psap,LOC107575616 coding upstream 859875 23157102 ~ 23167091 (-)
G95934 NA non-coding downstream 51864 22174326 ~ 22244477 (-)
G95933 NA non-coding downstream 65802 22228184 ~ 22230539 (-)
G95922 NA non-coding downstream 159950 22135936 ~ 22136391 (-)
G95902 NA non-coding downstream 175899 22114696 ~ 22120442 (-)
G95903 NA non-coding downstream 256235 22039782 ~ 22040106 (-)
G95941 NA non-coding upstream 6078 22303305 ~ 22303781 (-)
G95949 lclat1,LOC107568033,LOC107742083,LOC107601640 non-coding upstream 16429 22313656 ~ 22483219 (-)
G95971 NA non-coding upstream 125892 22423119 ~ 22424220 (-)
G95937 lbh non-coding upstream 167919 22465146 ~ 22471340 (-)
G95984 NA non-coding upstream 223789 22521016 ~ 22521948 (-)
klc1b klc4,LOC107742075,LOC108263390,LOC106963894 other downstream 46028 22231449 ~ 22250313 (-)
G95932 NA other downstream 57771 22236104 ~ 22238570 (-)
tmem254 LOC107689576,LOC107653189,LOC107742085,LOC107711410 other downstream 139482 22151742 ~ 22156859 (-)
LOC122357128 NA other downstream 152371 22137388 ~ 22143970 (-)
G95646 adgra1,LOC107750141,LOC107567015,LOC107663568,LOC106903219,LOC107720869 other downstream 1116124 21007472 ~ 21180217 (-)
ypel5 ypel5,slc30a10,LOC107568027,LOC108441457,LOC103458748,LOC102788175,LOC102210471 other upstream 29478 22326705 ~ 22329292 (-)
LOC122356262 stk32c,LOC107570736,LOC107708193,LOC107670801,LOC107653186,LOC107717191 other upstream 74340 22371567 ~ 22448011 (-)
G95972 NA other upstream 123709 22420936 ~ 22422869 (-)
G96036 mios,LOC107688218,LOC107592123,LOC107592481,LOC107671474 other upstream 524754 22821981 ~ 22823259 (-)
G96053 NA other upstream 696810 22994037 ~ 22995599 (-)

Expression


Co-expression Network