G95937 (lbh)


Basic Information

Item Value
gene id G95937
gene name lbh
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056711.1
NCBI id CM032080.1
chromosome length 25085836
location 22465146 ~ 22471340 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU141839
actgcagGAAGTCACAACATGTCTAAAGCCTTTGTGTTGAGAAACAAACCAGGATAGAAACACACGGCCTGCTTCTCACTCACAAACACTTTTAGAGTTACAATATATTCACAACAGaagccttctctctctctcacacacacacacacacacacacacacacacacacacacacacacacacacagaggtggGAATGAAGTCCGAGCGAGCGGATGTCAGTGGATCGGTTGTTCTGTATGTGCTGGTGTGATTGTCTATTCTATGTGTGTGATTCATGTCAGTAGATCCTCTCTAGCGCTGAGAGTTCTGCATCTGTCCATTCTGCAGGTTTCCGTCACACTCTTCctcgtcctcctcttcctcgctcACCAGGAACTCCTCGGGCGGCCAGCGCAGCTCCCCGCTCTCCACCTcgccctccgtcggctccaccacgaTCGACGGCAGACGGTCCTTCAGCTTACAGCAGCGCTCGAAGTCTGACGGGTCCGGGAAGAT

Function

symbol description
lbh Acts upstream of or within embryonic viscerocranium morphogenesis and neural crest cell migration. Predicted to be located in cytoplasm. Predicted to be active in nucleus. Is expressed in several structures, including brain; digestive system; head; neural crest cell; and pleuroperitoneal region. Orthologous to human LBH (LBH regulator of WNT signaling pathway).

NR:

description
PREDICTED: protein LBH

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU141839 True 500 lncRNA 0.52 2 22465146 22471340

Neighbor

gene id symbol gene type direction distance location
slc30a10 slc30a10,ypel5,LOC107672346,LOC107601641,LOC107568027,LOC107683860,LOC107568031 coding downstream 141637 22317240 ~ 22323509 (-)
zmp:0000000755 LOC107672344,LOC107742077,LOC103371009 coding downstream 181500 22254179 ~ 22283646 (-)
ptk7b LOC107672339,LOC107577581,LOC107742082 coding downstream 238142 22185040 ~ 22227004 (-)
srfb LOC107689574,LOC107570739 coding downstream 281972 22157665 ~ 22183174 (-)
pwwp2b pwwp2b,LOC107670800,LOC107754010,LOC107744923,LOC107653191 coding downstream 413460 22041455 ~ 22051686 (-)
LOC122356263 ypel5,slc30a10,slc30a1b,LOC107568027,LOC107672346,LOC107601641 coding upstream 13949 22485289 ~ 22489323 (-)
LOC122356266 LOC107671403,LOC107756883,LOC107688264,LOC107592480,LOC107592170 coding upstream 331378 22802718 ~ 22819457 (-)
c1d c1d,LOC107551342,LOC107754748,LOC107717833,LOC107702672,LOC107660245 coding upstream 663478 23134818 ~ 23136642 (-)
LOC122356317 psap,LOC107575616 coding upstream 685762 23157102 ~ 23167091 (-)
mrps6 LOC107717855,LOC107702688,LOC107660242,LOC107754760,LOC107575615 coding upstream 696533 23167873 ~ 23168903 (-)
G95971 NA non-coding downstream 40926 22423119 ~ 22424220 (-)
G95938 LOC107711401,LOC107568028,LOC107683865 non-coding downstream 94521 22248056 ~ 22370625 (-)
G95941 NA non-coding downstream 161365 22303305 ~ 22303781 (-)
G95934 NA non-coding downstream 220669 22174326 ~ 22244477 (-)
G95933 NA non-coding downstream 234607 22228184 ~ 22230539 (-)
G95984 NA non-coding upstream 49676 22521016 ~ 22521948 (-)
G95985 NA non-coding upstream 50615 22521955 ~ 22523449 (-)
G95990 NA non-coding upstream 149702 22621042 ~ 22621428 (-)
G95992 NA non-coding upstream 162926 22634266 ~ 22634490 (-)
G95995 NA non-coding upstream 186330 22657670 ~ 22657904 (-)
LOC122356262 stk32c,LOC107570736,LOC107708193,LOC107670801,LOC107653186,LOC107717191 other downstream 17135 22371567 ~ 22448011 (-)
G95972 NA other downstream 42277 22420936 ~ 22422869 (-)
ypel5 ypel5,slc30a10,LOC107568027,LOC108441457,LOC103458748,LOC102788175,LOC102210471 other downstream 135854 22326705 ~ 22329292 (-)
G95936 lbh other downstream 167919 22296341 ~ 22297227 (-)
klc1b klc4,LOC107742075,LOC108263390,LOC106963894 other downstream 214833 22231449 ~ 22250313 (-)
G96036 mios,LOC107688218,LOC107592123,LOC107592481,LOC107671474 other upstream 350641 22821981 ~ 22823259 (-)
G96053 NA other upstream 522697 22994037 ~ 22995599 (-)
si:ch211-130h14.4 LOC107660236 other upstream 958306 23429646 ~ 23444063 (-)
borcs7 borcs7,LOC107695248,LOC107585367,LOC107588662,LOC107716326 other upstream 1871409 24342749 ~ 24344657 (-)
fgf8a fgf8a,LOC107673879,LOC107585369,LOC107696243,LOC107588741,LOC107716294 other upstream 1927783 24399123 ~ 24404715 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
bowfin (Amia calva) AMCG00013520 NA coding CM030125.1 CM030125.1 33517155 ~ 33521234 (+)