cgasa


Basic Information

Item Value
gene id cgasa
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056711.1
NCBI id CM032080.1
chromosome length 25085836
location 24842270 ~ 24845635 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043254579.1
TATCCTGATGTCACACTTCTCAATAACAGAAACCTTCCTTTAAATGCACAACCGCGCGCGTCGCAGCTCATACACCAGCCATCATGAACAAGCAGAGGAGACCGGGCAGCTTCCGCGAGACAACCCCTGGCCGACCCAAAGCCAAAGCTCAAACAAAAGCAACTGCAAATGGCAGGAGCAAAGAGCAGAGAGATCACCGTGAGACTGGCACGGAGGAAAAGTCTCCTGAGTGCGCAGGGGCCAAGTGCACGGCAAAACGGGGGGGCAGGAAGCAACAGagtaaaaaagagaaagatcCTCATGGGTGTGAAAGTGAAGACAAACCACTTGAAGAACCGGCACTCAAACGGGGAAACATTAATCGACAGAGCAAAAAGCAGTCTCCGGAGACCTCCAAAGTTAAGTACGAAGAAAACGGCGCTTCTGTTATCAATAACGCAAACAACGCTGACGAGAATGACAGACAAGACGGGAGGAAGAAATTAGACCGTGAAAGTAAATGCAAACCAAGGCAGAGCGCAAACAGCAAAGCAGATGAAAAAACAGCACCAAGACGTAGTGGGAAAAAGAAGATAGGTCCTTTAAACATCGACAAAGATGAATCTCCGGAGAGGCCCGAAAGATCGGAAGAAAAGTCCAGAGCAAAACCTAGAAGGCAGCATGAATCTGATATCAAAGCAGCGGTTTGCGCGCTCAGCCCGGGTCGAAGAAAGAAAAGCGCGGGACACAACGCGACGACAGTTCACGAGCCACTGGGAAAGCTTCTTAGAGCAACTCTCGACAAATTAAAGATCAAGAAGATCGAGCAGTCTATTGCGTCCAGTTGTGTTAATGACATAATGGATACAGTGATTGGATACCTGAAACGAAACACGACCTGGTGTGAAGAGATCGAGAGATTACGGACTGGAAGTTATTATGAAAACGTTAAAATTTGTGAGCCGGATGAATTCGACGTGATGCTCACTATTCCCGTGGAGCGAGTGGACATTCAGGAGTTTGATGAGGCCGGAGCATTTTATAGCATCGCATTGAAACGACATCCCAAAAGACATCCTCTGGACAAATTCCTAAACGAAGACAAGACCATTCAGGCCAGCGAAATGCTTGGTGAATTCAGAGACGCCGTCAAGAAGGCTGTGGAGAAACTCCCATACCAAATTGACATGCAGCGAAAAAAGCCTAAGTGCCCTGCAGTGACACTGGAAGTAAAAATGGAAGGAAACAAAAAGACCATTTCTGTAGACTTCGTTCTTGGTCTTAAGGTTCATCGTGCAAGCTGGCCAGACTTTACAAAAGATGGcttcaaaatagaaaactggCTTGGTAAAAAGGAGAGAGCTAAAATGAAACAACAACCATTCTACCTGGTGCCTAAATATGAGGGAAAAGGAAACGCAGAGCATGATGGAGTTGTTGCAAAAGATGCCTGGCGAATTTCCTTTTCACATGTTGAAAAAGAAATTCTGAATAAGCATGGCCACTCCAAGACATGCTGTGAAAACGTTAAACAGAAATGTTGCCGGAAGGAGTGTCTAAAGCTCCTGAAGTATCTTCTTCAACAGCTCAAAGAGGATGACAAATCTAACAAGATGTCCAGCTTCTGCTCTTATCATGCAAAGACCACCCTTCTCCACGCTTGCGCTACAAGAGGAACCGACGACAAGTGGGAATACAGTCAGCTGGCCGACTGTTACCTGCAGCTTTTAGAAGACTTTGCGAAACATCTGAGAAATCGTCTTCTCCCCAACTTTTTCATTCCAACTCATAATCTCTTACATCAAGTCTCTCAGAGTAGCTGTGATTACCTGGCAAATGAAATTGAATTTCAGTGCAATAACAACTTTCCTATATTCAGAAAATGATTGTATTTCTGCATGTTTTGTTCTTTCAATTTAATAGTCAACTGTTGCTTAATAACATTCACTAATATGTATATTCCAAATAGTTTTATAGGCTTTTATTTGATATGCATTCAGCTGAACAAGACTGTTACATCATCTACACAACTGGAGGCATTTTAACCTCACATCAATGTaggataacaataataaaaaaaaacaacaaaaacactgaactggaggggaaaaaaatcctattaaagaaatatatcatGCACAcaaaatgaatcagtgtttctTAAACGTAAAACTTAACTGGTCAGTTACAAGGGCTTCACGGGTACTCCACAAAAGAGAGGATCAACACTTAAAAAGCTTATG

Function

GO: NA

KEGG:

id description
K17834 MB21D1; cyclic GMP-AMP synthase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043254579.1 True 2222 mRNA 0.43 5 24842270 24845635

Neighbor

gene id symbol gene type direction distance location
asrgl1 asrgl1,LOC107695955,LOC107585330,LOC107673965,LOC105911569,LOC103032358,LOC108442615 coding downstream 169936 24667305 ~ 24672334 (-)
b3gat2 b3gat2,LOC107718837,LOC107694338,LOC107673925,LOC107588666,LOC107585329,LOC107716319 coding downstream 221837 24603688 ~ 24620433 (-)
slc2a15a slc2a15a,LOC107716293,LOC107673883,LOC107708408,LOC107696166,LOC107585370,LOC107588743,LOC108442702 coding downstream 400937 24430020 ~ 24441333 (-)
fbxw4 fbxw4,LOC107707737,LOC107716323,LOC107673945,LOC107694796,LOC107588663,LOC107585327 coding downstream 448383 24367927 ~ 24393887 (-)
wbp1la LOC107694985,LOC107716324,LOC107585326,LOC107673922,LOC107588740,LOC107708389 coding downstream 480974 24350847 ~ 24361296 (-)
eef1a1a eef1a1a,LOC107693767,LOC107716315,LOC107588677,LOC107718831,LOC107673933,LOC108258313,LOC107585334 coding upstream 814 24846449 ~ 24851300 (-)
slc17a5 slc17a5,LOC107588676,LOC107673875,LOC107585335,LOC107693696,LOC107718830 coding upstream 5768 24851403 ~ 24856234 (-)
rin2a LOC107585336,LOC107716314,LOC107588678,LOC107718829 coding upstream 11584 24857219 ~ 24887322 (-)
si:dkey-187a12.4 si:dkey-187a12.4,LOC107718844,LOC107695884,LOC107588745,LOC107716288,LOC107673937,LOC107585337 coding upstream 42480 24888115 ~ 24890861 (-)
slc24a3 slc24a3,LOC107718828,LOC107693448,LOC107673935,LOC107716313 coding upstream 46318 24891953 ~ 24951267 (-)
G96436 NA non-coding downstream 125308 24714219 ~ 24716962 (-)
G96435 rims1,LOC107588670,LOC107718836 non-coding downstream 128812 24710744 ~ 24713458 (-)
G96415 NA non-coding downstream 166324 24630553 ~ 24675946 (-)
LOC122357044 NA non-coding downstream 177345 24652927 ~ 24664925 (-)
G96411 NA non-coding downstream 235894 24606130 ~ 24606376 (-)
fgf8a fgf8a,LOC107673879,LOC107585369,LOC107696243,LOC107588741,LOC107716294 other downstream 437555 24399123 ~ 24404715 (-)
borcs7 borcs7,LOC107695248,LOC107585367,LOC107588662,LOC107716326 other downstream 497613 24342749 ~ 24344657 (-)
si:ch211-130h14.4 LOC107660236 other downstream 1398207 23429646 ~ 23444063 (-)
G96053 NA other downstream 1846671 22994037 ~ 22995599 (-)
G96036 mios,LOC107688218,LOC107592123,LOC107592481,LOC107671474 other downstream 2019011 22821981 ~ 22823259 (-)

Expression


Co-expression Network