srfb (LOC107689574,LOC107570739)


Basic Information

Item Value
gene id srfb
gene name LOC107689574,LOC107570739
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056711.1
NCBI id CM032080.1
chromosome length 25085836
location 22157665 ~ 22183174 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043254898.1
CCGCTGCGGCGTCGCGAAGCGTCACACACGCGCGGTGACTGTCAGCTCTGAGCGGCTGGACGCGGAGTCGAGGCGTTCGCGGCGCGTTGGCGAAACAGAGCTCTGATTTGACGCGTTCGCGGCGCACTAGACGACGCGGCGGAGGGATCGCGGAAGCGCTCGTGCGGTTTTCCTTTTAGAGAAAGCGTGTCTTTCGCGGAGCTCCAGGGGGAAGGGGAAGCGGGAGCGAAGCCGGCCGGAGGCGCTCAGGTTCAGCATCACTTCTCAAAGTTTCTCGCGGACTCTGCTGGTGTATGAGCGCCGCTGCGGATCTCGCTCTCTCACCGACTGTCGCTCCAGCGCTCCGCTGCCGTCACACGGATCGTTCTCCCCGGGTTCTAGGATGTTATCCAGCCAGACCGCAGCGGCTCTGAGTGGAAGCGGATCAGCGGCGGGGAAGAGCGCAGGCCACGGCGCGGTGGTGATGGGCGCCGGGGTCCGTGCGGGGTTCGCTCGGGGGCTGGGGCCGATGGGGCTCGGGATCCCAGGGAGGTTCGAGCCGGATAAAGAGGGACCCCCGCACCTCTGCAGCGGCTCCGACGCGGACTCCGACTCCGGCGATGAGGACGAGCTCTTGGGGTCAGTCGGGGACAACCGGAGGGGAGGCGGCGTCAAGCGGGAGAGAGCAGAGATGGAAGCCGCGATTGTGGGACCCGAGGCCGGCTTGCCTTCCGCGGCGCTCGCGGCTGGAGCGACTGGAGCGAAACCGGGCAAGAAGACCCGCGGAAGAGTGAAGATAAAGATGGAGTTTATAGACAACAAACTGCGTCGGTACACGACCTTCAGCAAGAGGAAGACGGGCATCATGAAGAAGgcgTACGAGCTCTCCACGCTCACAGGGACTCAGGTTCTTCTGCTGGTGGCCAGCGAGACGGGACACGTCTACACCTTCGCCACTCGTAAGCTGCAGCCCATGATCACCAGCGAGACGGGCAAAGCTCTGATCCAGACCTGTCTGAACTCTCCAGACTCTCCGCCTCGCTCCGACCCGTCCACGGACCAGCGCATGAGCGCCACGGGCTTCGAGGAGACCGACCTCACCTACCAGGTGTCTGAGTCCGAGAGCCTCGGAGAAACCAAGGACGCTCTGAAGCCGTCCTTCACCGTGGCCAGTGTCCCGGGCAGCAGCACCGTCCCCAGCTCGTCCAGCAGCCCGTCCTTCCCCATCACCAACTACCTGCCGCCGGTCAGCGGGAGCGGAGCCAAGAGCACCGGGGCCCCTGGAGGAGTCATGCAGCTGCCCGCCGGCTTCACCTTCATGTCAGGCTCTCCGTTTGCTCCCGGGACTCCTGCGATTCCTCTGGgtcagctgcagcagcactctCTGGCCGGTCAGAGCATCACGGCCCCGGGGTCCGGCTCGTCTCAGGGTCAGCAGGGTCAGCAGGCTGTGTTCCGTCTGCCGGCCACCGTCTCGCTCGCCGgcggAGCGATGCCGCAGCAGCTCCAGACCGTCCAGGTCCAGTCCAGCAGTCAGTCGAGCTGCATCAGCACCAGCACCAGCAGTCCAGAGATCTCTCAGAGCAGCACGGCGtccacagctgCGGTCAGTCTGCAGCCGGCCACCATCGTCACCTCCTCAGTGCCCACCTCCATGACCGGTCACATGATGTaccccagcacacacacactcatgtacGCATCCGCACCCACGCTAGCAGACGGGAGCGTAGCGGTGCTCAACGCCTTCACACAGGGACCGGTGTCACACACACCGACTCAGGACACAGgtggcGTTCCTCAGGTGTTTCTCACAGCTCCTCCCGGTACGGTTCAGATTCCCGTCTCGGCGGTGCAGCTTCATCCAATGGTGATTGGTCAGCAGTCCAGCGGCAGCAGCAGTAGTCTGACCGAGCTTCAGGTCGTCAGTCTGGACGCCTCCCAGAACGCCAAGATCGACTGACCGCGCCCACAGAGACTGACGCCGCTATTTATTAACGCCTTCATACAGGTCCTCGTTTATACGTCTGACTCTACGGTTTCTGCTGGAGACAGCCACGGCACAGCCagtgagaagtgtgtgtgtgtgtgtgtgtaaaagtgagAGAGTATAAGTATTGTTTTTGCATGCGAgccgtgcgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgttcggtgtgtgtgttcggtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgcgtgcgtgtgtgtgcgtgtgtgtgtgtgtgtgtgtgtgtgtttggctgcaAAGttatctgaacagatttggaaaataAGACGAGACATATGGAAATGTACATAacctgttttttaatatttgagatttgttttgcctgtttgtGCGATGGCATGTAGTtgtttttatagatattttgtaTACATTGTAACTTGTTTTGCTTATGAAATCTGATATTTCACCCtgtaaattaatgtaatataaacatatattatattgatttatacACAGTGTTCTGACGAGAAATACAAAGATTTAGGATCaaactctttttctctcttttgtaaCGTGAATGTGCCAAATCTcctctaaaaacacaaatgaaaagagagagaaagaggtttGAAACGCTGTTTATCCCCGAATGCTGTTGATGATTCTGCCCGTGACACCCCGATGCCTACGAACGCTGAGAAACGCCTCAAACTGAGACAAAACTAAagaagttcacccaaaactagAATGTGCTCCCCTCAGCTCGTCCAACATTCAGATGAGagtcttcatcagatctggagaaatgtgtctcagtgaagtgaatgggtgccgtcagaacgagcgtctcataaaaacatcacactAATCCGCAGcgcatctggagaagacaaaagatcaaactaatccagcgttAAGACGTTTATAACTGCGGTATAAATCCATAATCTGTAATAATCCAGTGGAAAAAGTGAAATCTGCTCAAATCAAACAcaactttttaaagcttttttttagtctgttgtctgatggatgtttttatcagctctttggactctcgttccgacggcacccattcacatccattgctgggACGCATTCCTCCAAATGAAGAAACAGATGAGCACAGTTTCAGCAcagtttttggttgaactaataatgtgtgtgttgcaCAAGTGCCCTGTCGATCAATCTAAGCGAAGAACGTCATATTGATGTTAAAGTGAATGAACGTGACAGTCGGTCTGAAGATGTCTTTCTTCTGTCTGTGGTGATGTTGTAAAGGGCTTCGGTCGACGGCTCAGAAGCTCTTGAAGCTCTTGAAGCTCTTGAAGCTCTTGAAGCTCTGCTGGAGGAGGTTCGCTGGCCTTAATATGCTCTGCGTGTTTTGAATCATCTCATACGTTGCGTTTGACGCGTTTCACATCACGCTGTTTTAGGgcttattttcttttgctttttccatcttttttttcctctccttttAACCTTGACACATGGCCACATTTTTACTGCGTAATGCTGAATATTTAGAGCTGATCCTCACTGAATGTGCTCAGAAAGCCTCTGTATCTGAGCCGGTTTGTTTGATATGTTTTGGTTAGTTTTAGAGAGACTGTGTGAGAGTAACACTGGTTCTTCTGTTGGATTATTGTGTGATTTTTCTGGTTTCCGACACGGCAAATGTACAGacctttttgtaataaaaaaatggatctTGTCA
>XM_043254899.1
CGCTGCGGCGTCGCGAAGCGTCACACACGCGCGGTGACTGTCAGCTCTGAGCGGCTGGACGCGGAGTCGAGGCGTTCGCGGCGCGTTGGCGAAACAGAGCTCTGATTTGACGCGTTCGCGGCGCACTAGACGACGCGGCGGAGGGATCGCGGAAGCGCTCGTGCGGTTTTCCTTTTAGAGAAAGCGTGTCTTTCGCGGAGCTCCAGGGGGAAGGGGAAGCGGGAGCGAAGCCGGCCGGAGGCGCTCAGGTTCAGCATCACTTCTCAAAGTTTCTCGCGGACTCTGCTGGTGTATGAGCGCCGCTGCGGATCTCGCTCTCTCACCGACTGTCGCTCCAGCGCTCCGCTGCCGTCACACGGATCGTTCTCCCCGGGTTCTAGGATGTTATCCAGCCAGACCGCAGCGGCTCTGAGTGGAAGCGGATCAGCGGCGGGGAAGAGCGCAGGCCACGGCGCGGTGGTGATGGGCGCCGGGGTCCGTGCGGGGTTCGCTCGGGGGCTGGGGCCGATGGGGCTCGGGATCCCAGGGAGGTTCGAGCCGGATAAAGAGGGACCCCCGCACCTCTGCAGCGGCTCCGACGCGGACTCCGACTCCGGCGATGAGGACGAGCTCTTGGGGTCAGTCGGGGACAACCGGAGGGGAGGCGGCGTCAAGCGGGAGAGAGCAGAGATGGAAGCCGCGATTGTGGGACCCGAGGCCGGCTTGCCTTCCGCGGCGCTCGCGGCTGGAGCGACTGGAGCGAAACCGGGCAAGAAGACCCGCGGAAGAGTGAAGATAAAGATGGAGTTTATAGACAACAAACTGCGTCGGTACACGACCTTCAGCAAGAGGAAGACGGGCATCATGAAGAAGgcgTACGAGCTCTCCACGCTCACAGGGACTCAGGTTCTTCTGCTGGTGGCCAGCGAGACGGGACACGTCTACACCTTCGCCACTCGTAAGCTGCAGCCCATGATCACCAGCGAGACGGGCAAAGCTCTGATCCAGACCTGTCTGAACTCTCCAGACTCTCCGCCTCGCTCCGACCCGTCCACGGACCAGCGCATGAGCGCCACGGGCTTCGAGGAGACCGACCTCACCTACCAGGTGTCTGAGTCCGAGAGCCTCGGAGAAACCAAGGACGCTCTGAAGCCGTCCTTCACCGTGGCCAGTGTCCCGGGCAGCAGCACCGTCCCCAGCTCGTCCAGCAGCCCGTCCTTCCCCATCACCAACTACCTGCCGCCGGTCAGCGGGAGCGGAGCCAAGAGCACCGGGGCCCCTGGAGGAGTCATGCAGCTGCCCGCCGGCTTCACCTTCATGTCAGGCTCTCCGTTTGCTCCCGGGACTCCTGCGATTCCTCTGGgtcagctgcagcagcactctCTGGCCGGTCAGAGCATCACGGCCCCGGGGTCCGGCTCGTCTCAGGGTCAGCAGGGTCAGCAGGCTGTGTTCCGTCTGCCGGCCACCGTCTCGCTCGCCGgcggAGCGATGCCGCAGCAGCTCCAGACCGTCCAGGTCCAGTCCAGCAGTCAGTCGAGCTGCATCAGCACCAGCACCAGCAGTCCAGAGATCTCTCAGAGCAGCACGGCGtccacagctgCGGTCAGTCTGCAGCCGGCCACCATCGTCACCTCCTCAGTGCCCACCTCCATGACCGGTCACATGATGTaccccagcacacacacactcatgtacGCATCCGCACCCACGCTAGCAGACGGGAGCGTAGCGGTGCTCAACGCCTTCACACAGGGACCGGTGTCACACACACCGACTCAGGACACAGgtggcGTTCCTCAGGTGTTTCTCACAGCTCCTCCCGGTACGGTTCAGATTCCCGTCTCGGCGGTGCAGCTTCATCCAGTACGGCAAGATCAACACTTCACAAATGGTGATTGGTCAGCAGTCCAGCGGCAGCAGCAGTAGTCTGACCGAGCTTCAGGTCGTCAGTCTGGACGCCTCCCAGAACGCCAAGATCGACTGACCGCGCCCACAGAGACTGACGCCGCTATTTATTAACGCCTTCATACAGGTCCTCGTTTATACGTCTGACTCTACGGTTTCTGCTGGAGACAGCCACGGCACAGCCagtgagaagtgtgtgtgtgtgtgtgtgtaaaagtgagAGAGTATAAGTATTGTTTTTGCATGCGAgccgtgcgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgttcggtgtgtgtgttcggtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgcgtgcgtgtgtgtgcgtgtgtgtgtgtgtgtgtgtgtgtgtttggctgcaAAGttatctgaacagatttggaaaataAGACGAGACATATGGAAATGTACATAacctgttttttaatatttgagatttgttttgcctgtttgtGCGATGGCATGTAGTtgtttttatagatattttgtaTACATTGTAACTTGTTTTGCTTATGAAATCTGATATTTCACCCtgtaaattaatgtaatataaacatatattatattgatttatacACAGTGTTCTGACGAGAAATACAAAGATTTAGGATCaaactctttttctctcttttgtaaCGTGAATGTGCCAAATCTcctctaaaaacacaaatgaaaagagagagaaagaggtttGAAACGCTGTTTATCCCCGAATGCTGTTGATGATTCTGCCCGTGACACCCCGATGCCTACGAACGCTGAGAAACGCCTCAAACTGAGACAAAACTAAagaagttcacccaaaactagAATGTGCTCCCCTCAGCTCGTCCAACATTCAGATGAGagtcttcatcagatctggagaaatgtgtctcagtgaagtgaatgggtgccgtcagaacgagcgtctcataaaaacatcacactAATCCGCAGcgcatctggagaagacaaaagatcaaactaatccagcgttAAGACGTTTATAACTGCGGTATAAATCCATAATCTGTAATAATCCAGTGGAAAAAGTGAAATCTGCTCAAATCAAACAcaactttttaaagcttttttttagtctgttgtctgatggatgtttttatcagctctttggactctcgttccgacggcacccattcacatccattgctgggACGCATTCCTCCAAATGAAGAAACAGATGAGCACAGTTTCAGCAcagtttttggttgaactaataatgtgtgtgttgcaCAAGTGCCCTGTCGATCAATCTAAGCGAAGAACGTCATATTGATGTTAAAGTGAATGAACGTGACAGTCGGTCTGAAGATGTCTTTCTTCTGTCTGTGGTGATGTTGTAAAGGGCTTCGGTCGACGGCTCAGAAGCTCTTGAAGCTCTTGAAGCTCTTGAAGCTCTTGAAGCTCTGCTGGAGGAGGTTCGCTGGCCTTAATATGCTCTGCGTGTTTTGAATCATCTCATACGTTGCGTTTGACGCGTTTCACATCACGCTGTTTTAGGgcttattttcttttgctttttccatcttttttttcctctccttttAACCTTGACACATGGCCACATTTTTACTGCGTAATGCTGAATATTTAGAGCTGATCCTCACTGAATGTGCTCAGAAAGCCTCTGTATCTGAGCCGGTTTGTTTGATATGTTTTGGTTAGTTTTAGAGAGACTGTGTGAGAGTAACACTGGTTCTTCTGTTGGATTATTGTGTGATTTTTCTGGTTTCCGACACGGCAAATGTACAGacctttttgtaataaaaaaatggatctTGTCA

Function

NR:

description
PREDICTED: serum response factor isoform X2

GO: NA

KEGG:

id description
K04378 SRF; serum response factor

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043254898.1 False 3734 mRNA 0.54 8 22157665 22183174
XM_043254899.1 True 3758 mRNA 0.53 8 22157665 22183173

Neighbor

gene id symbol gene type direction distance location
pwwp2b pwwp2b,LOC107670800,LOC107754010,LOC107744923,LOC107653191 coding downstream 105979 22041455 ~ 22051686 (-)
LOC122356328 inpp5a,LOC107744939 coding downstream 133055 21908358 ~ 22024610 (-)
valopa valopa,LOC107689369,LOC107688178,LOC107754013,LOC107745034 coding downstream 290767 21847430 ~ 21866898 (-)
trnag-gcc_71 NA coding downstream 583344 21574251 ~ 21574321 (-)
trnag-gcc_70 NA coding downstream 743794 21413800 ~ 21413871 (-)
ptk7b LOC107672339,LOC107577581,LOC107742082 coding upstream 1866 22185040 ~ 22227004 (-)
zmp:0000000755 LOC107672344,LOC107742077,LOC103371009 coding upstream 71005 22254179 ~ 22283646 (-)
slc30a10 slc30a10,ypel5,LOC107672346,LOC107601641,LOC107568027,LOC107683860,LOC107568031 coding upstream 134066 22317240 ~ 22323509 (-)
LOC122356263 ypel5,slc30a10,slc30a1b,LOC107568027,LOC107672346,LOC107601641 coding upstream 302115 22485289 ~ 22489323 (-)
LOC122356266 LOC107671403,LOC107756883,LOC107688264,LOC107592480,LOC107592170 coding upstream 619544 22802718 ~ 22819457 (-)
G95922 NA non-coding downstream 21274 22135936 ~ 22136391 (-)
G95902 NA non-coding downstream 37223 22114696 ~ 22120442 (-)
G95903 NA non-coding downstream 117559 22039782 ~ 22040106 (-)
G95899 NA non-coding downstream 282736 21874513 ~ 21874929 (-)
trnag-gcc_72 NA non-coding downstream 503984 21653612 ~ 21653681 (-)
G95933 NA non-coding upstream 45010 22228184 ~ 22230539 (-)
G95938 LOC107711401,LOC107568028,LOC107683865 non-coding upstream 64882 22248056 ~ 22370625 (-)
G95941 NA non-coding upstream 120131 22303305 ~ 22303781 (-)
G95949 lclat1,LOC107568033,LOC107742083,LOC107601640 non-coding upstream 130482 22313656 ~ 22483219 (-)
G95971 NA non-coding upstream 239945 22423119 ~ 22424220 (-)
tmem254 LOC107689576,LOC107653189,LOC107742085,LOC107711410 other downstream 806 22151742 ~ 22156859 (-)
LOC122357128 NA other downstream 13695 22137388 ~ 22143970 (-)
G95646 adgra1,LOC107750141,LOC107567015,LOC107663568,LOC106903219,LOC107720869 other downstream 977448 21007472 ~ 21180217 (-)
G95526 NA other downstream 1586103 20570038 ~ 20571562 (-)
G95511 NA other downstream 1660801 20493642 ~ 20496864 (-)
klc1b klc4,LOC107742075,LOC108263390,LOC106963894 other upstream 48275 22231449 ~ 22250313 (-)
G95932 NA other upstream 52930 22236104 ~ 22238570 (-)
G95936 lbh other upstream 113167 22296341 ~ 22297227 (-)
ypel5 ypel5,slc30a10,LOC107568027,LOC108441457,LOC103458748,LOC102788175,LOC102210471 other upstream 143531 22326705 ~ 22329292 (-)
LOC122356262 stk32c,LOC107570736,LOC107708193,LOC107670801,LOC107653186,LOC107717191 other upstream 188393 22371567 ~ 22448011 (-)

Expression


Co-expression Network