fbxo11a (fbxo11a,LOC107725019,LOC107679165,LOC107733352,LOC107588452,LOC108413220,LOC108430631,LOC107667079)


Basic Information

Item Value
gene id fbxo11a
gene name fbxo11a,LOC107725019,LOC107679165,LOC107733352,LOC107588452,LOC108413220,LOC108430631,LOC107667079
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056711.1
NCBI id CM032080.1
chromosome length 25085836
location 19505862 ~ 19532003 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043254965.1
gtgtgtgtgtgtgtgtgtgtgtgtgagtgtgtgagtgtgtgtgtaaatggcTCCTCCTGCCACTGAAAACCGAAATCGGAGCGCCTGGGCAGTAAAACCGCTTCTCCGGAGCTCAGACCGAGCAGATTCCCAGTGCGATGCCCTTTAGGCTCTTATTTGCATCCTCCGAGCTCAGCACCGTGTGAGGACCCCGAGGAAAGGGCTGCAGCGGCTTGCGTTTTTCACCAGAAAGCCGTCAAATGAACTCCGTCAGAGCGACGAACCGCAGACCCCGGCGAGTGTCGAGGCCGCGCCCGGCGCCGCCTGACAGAAACAACGCAGAAAGAGATGAGGAAGTTCCTGCCGAGATGGTTGCAGAAGAATCCGGTCAGGGCGCCCAAAACAGTCCGTACCAACTTCGAAGAAAATCTCTGTTGCCGAAGAGAACAGCTTGTCCAACAAAGACCAACATGGAGGGTGCTTCCACGTCAACGACAGAAAACTTTGGGCATCGGGCAAAACGTGCCAGAGTGTCCGGAAAATCACAAGATCTGCCCGTCACCCCGGCGGAGCAGTACCTGCAGGTGAAGCTTCCAGACGAAGTGGTTCTGAAAATCTTCTCCTATCTGTTGGAGCAGGACCTGTGTCGAGCGGCCTGTGTGTGTAAACGCTTTAGTGAACTGGCCAACGACCCCATCCTCTGGAAGAGGCTCTACATGGAGGTTTTCGAGTACACGCGTCCCATGATGCACCCCGAGTCTGGGAAGTTCTACCAGATCAACCCAGAAGAGTACGAACAGTCCAATCCCTGGAAGGAGAGCTTTCAGCAGCTGTATAAAGGCGCTCATGTGAAACCCGGCTTCGCGGAACATTTCTACAGCAACCCGGCCAGATATAAGGGACGGGAAAACATGCTGTACTATGACACCATTGAAGACGCTCTGGGAGGAGTTCAGGAAGCGCACTTCGACGGTTTGATATTTGTCCATTCTGGGATCTACACAGACGAATGGATCTACATCGAGTCGCCCATCACCATGATCGGCGCCGCGCCGGGTAAAGTAGCGGATAAAGTCATCATAGAGAACACTAGGGACTCGACGTTTGTGTTCATGGAGGGGTCAGAGGACGCTTATGTAGGATATATGACGATAAAGTTCAATCCTGACGACAAATCAGCTCAGCATCACAACGCTCATCACTGTCTGGAGATCACCGTCAACTGCAGCCCCATCATTGACCACTGCATCATCCGCAGTACCTGCACAGTGGGctctgcagtgtgtgtgagcggtCAGGGAGCGTCTCCCACCATCAAACACTGTAACATCAGCGACTGTGAGAACGTGGGCCTCTAtatcacagaccacgctcaGGGCATTTACGAAGACAACGAGATCTCCAATAATGCTCTAGCAGGGATCTGGGTGAAAAACCACGGCAACCCCATCATTAGGAGGAATCACATCCATCACGGCAGAGACGTCGGGGTGTTCACGTTCGACCACGGCATGGGCTACTTCGAAAGCTGCAGCATCCACAGGAACAGGATAGCAGGCTTCGAGGTGAAGGCGTACGCTAACCCTACGGTAGTGCGCTGCGAGATCCATCACGGACAGACGGGCGGCATCTACGTGCACGAGAAGGGCCGAGGCCAGTTCATCGAGAACAAGATCTATGCAAACAACTTTGCAGGCGTGTGGATTACCTCAAACAGCGACCCCACGATCAGGGGGAACGCCATATTCAACGGCAACCAGGGTGGTGTTTACATATTCGGCGACGGTCGAGGTCTCATCGAAGGGAACGACATCTATGGCAATGCTTTAGCCGGAATCCAGATCCGGACCAACAGCTGCCCGATCGTCCGGCACAACAAGATCCACGACGGACAGCACGGGGGCATTTACGTGCACGAGAAGGGTCAGGGGGTGATCGAGGAGAACGAGGTGTACAGCAACACGCTGGCCGGTGTGTGGGTGACCACGGGCAGCACGCCCGTCCTGCGCAGGAACAGGATACACAGCGGGAAACAGGTGGGCGTTTATTTCTACGACAACGGTCACGGAGTGCTAGAAGACAACGACATCTACAACCACATGTACTCTGGAGTTCAGATCAGAACCGGCAGCAATCCTAAAATTAGGCGGAATAAGATCTGGGGTGGACAGAACGGGGGAATTCTTGTTTACAATTCAGGTTTAGGCTTCATCGAAGACAACGAGATCTTCGACAACGCCATGGCTGGGGTCTGGATCAAGACCGACAGCAACCCCACGCTCCGCAGGAACAAGATCCACGACGGCCGGGACGGAGGAATCTGCATCTTCAACGGAGGACGAGGGCTGCTGGAGGAGAACGACATCTTCAGGAACGCTCAGGCTGGAGTCCTCATCAGTACTAACAGTCACCCTGTGCTGCGCAAGAACAGGATATTCGACGGGTTTGCTGCCGGTATTGAGATCACGAATCACGCGACGGCGACACTAGAAGGCAATCAGATTTTCAACAACCGCTTCGGTGGACTGTTTCTGGCGTCTGGCGTCAACGTCACGATGAAAGACAACAAAATCATGAACAATCAGGATGCCATAGAGAAAGCGGTGAGCAGAGGTCAGTGCCTGTACAAGATTTCCAGTTACACCAGCTATCCAATGCACGATTTTTACAGGTGTCACACCTGTAACACCACAGACCGCAACGCCATCTGCGTGAACTGCATCAAGAAGTGTCATCAAGGGCACGACGTAGAGTTTATTAGACACGATAGGTTTTTCTGTGACTGCGGAGCAGGGACTCTGTCGAACCCGTGCACGCTCGCCGGAGAGCCCACGCACGACACAGACACGCTGTACGATTCGGCGCCCCCTATAGAGTCCAACACACTGCAGCACAACTGAAGCTCAGATGAGATCACACGCtagaaataattcaattttactCCAACAGACTCTCGGAGAGAGAAAGCGTCGCGCGAACGCTGAAaggaaacatttctatttaacaGACGTTCTGCTGTGGACTCGGCGAGGACTCAGGATGACGAGAGAAACGGACCCAGAGCGTTTAGGCTCCATGCTTCCCGTGCAGCCGTTACCGCGCTCTTGTATATGTACGGAAAAAAAAGACCCAGCACTTCAGTTTTGCTTtcatttccttttgtttttgtttttttaaagatgttgaGTTCTCGAGGTTTGATTTTAATGCTTTCTCATGTAGTTTTGTATTTTCAAGCAAAAA
>XM_043254966.1
gtgtgtgtgtgtgtgtgtgtgtgtgagtgtgtgagtgtgtgtgtaaatggcTCCTCCTGCCACTGAAAACCGAAATCGGAGCGCCTGGGCAGTAAAACCGCTTCTCCGGAGCTCAGACCGAGCAGATTCCCAGTGCGATGCCCTTTAGGCTCTTATTTGCATCCTCCGAGCTCAGCACCGTGTGAGGACCCCGAGGAAAGGGCTGCAGCGGCTTGCGTTTTTCACCAGAAAGCCGTCAAATGAACTCCGTCAGAGCGACGAACCGCAGACCCCGGCGAGTGTCGAGGCCGCGCCCGGCGCCGCCTGACAGAAACAACGCAGAAAGAGATGAGGAAGTTCCTGCCGAGATGGTTGCAGAAGAATCCGGTCAGGGCGCCCAAAACAGTCCGTACCAACTTCGAAGAAAATCTCTGTTGCCGAAGAGAACAGCTTGTCCAACAAAGACCAACATGGAGGGTGCTTCCACGTCAACGACAGAAAACTTTGGGCATCGGGCAAAACGTGCCAGAGTGTCCGGAAAATCACAAGATCTGCCCGTCACCCCGGCGGAGCAGTACCTGCAGGTGAAGCTTCCAGACGAAGTGGTTCTGAAAATCTTCTCCTATCTGTTGGAGCAGGACCTGTGTCGAGCGGCCTGTGTGTGTAAACGCTTTAGTGAACTGGCCAACGACCCCATCCTCTGGAAGAGGCTCTACATGGAGGTTTTCGAGTACACGCGTCCCATGATGCACCCCGAGTCTGGGAAGTTCTACCAGATCAACCCAGAAGAGTACGAACAGTCCAATCCCTGGAAGGAGAGCTTTCAGCAGCTGTATAAAGGCGCTCATGTGAAACCCGGCTTCGCGGAACATTTCTACAGCAACCCGGCCAGATATAAGGGACGGGAAAACATGCTGTACTATGACACCATTGAAGACGCTCTGGGAGGAGTTCAGGAAGCGCACTTCGACGGTTTGATATTTGTCCATTCTGGGATCTACACAGACGAATGGATCTACATCGAGTCGCCCATCACCATGATCGGCGCCGCGCCGGGTAAAGTAGCGGATAAAGTCATCATAGAGAACACTAGGGACTCGACGTTTGTGTTCATGGAGGGGTCAGAGGACGCTTATGTAGGATATATGACGATAAAGTTCAATCCTGACGACAAATCAGCTCAGCATCACAACGCTCATCACTGTCTGGAGATCACCGTCAACTGCAGCCCCATCATTGACCACTGCATCATCCGCAGTACCTGCACAGTGGGctctgcagtgtgtgtgagcggtCAGGGAGCGTCTCCCACCATCAAACACTGTAACATCAGCGACTGTGAGAACGTGGGCCTCTAtatcacagaccacgctcaGGGCATTTACGAAGACAACGAGATCTCCAATAATGCTCTAGCAGGGATCTGGGTGAAAAACCACGGCAACCCCATCATTAGGAGGAATCACATCCATCACGGCAGAGACGTCGGGGTGTTCACGTTCGACCACGGCATGGGCTACTTCGAAAGCTGCAGCATCCACAGGAACAGGATAGCAGGCTTCGAGGTGAAGGCGTACGCTAACCCTACGGTAGTGCGCTGCGAGATCCATCACGGACAGACGGGCGGCATCTACGTGCACGAGAAGGGCCGAGGCCAGTTCATCGAGAACAAGATCTATGCAAACAACTTTGCAGGCGTGTGGATTACCTCAAACAGCGACCCCACGATCAGGGGGAACGCCATATTCAACGGCAACCAGGGTGGTGTTTACATATTCGGCGACGGTCGAGGTCTCATCGAAGGGAACGACATCTATGGCAATGCTTTAGCCGGAATCCAGATCCGGACCAACAGCTGCCCGATCGTCCGGCACAACAAGATCCACGACGGACAGCACGGGGGCATTTACGTGCACGAGAAGGGTCAGGGGGTGATCGAGGAGAACGAGGTGTACAGCAACACGCTGGCCGGTGTGTGGGTGACCACGGGCAGCACGCCCGTCCTGCGCAGGAACAGGATACACAGCGGGAAACAGGTGGGCGTTTATTTCTACGACAACGGTCACGGAGTGCTAGAAGACAACGACATCTACAACCACATGTACTCTGGAGTTCAGATCAGAACCGGCAGCAATCCTAAAATTAGGCGGAATAAGATCTGGGGTGGACAGAACGGGGGAATTCTTGTTTACAATTCAGGTTTAGGCTTCATCGAAGACAACGAGATCTTCGACAACGCCATGGCTGGGGTCTGGATCAAGACCGACAGCAACCCCACGCTCCGCAGGAACAAGATCCACGACGGCCGGGACGGAGGAATCTGCATCTTCAACGGAGGACGAGGGCTGCTGGAGGAGAACGACATCTTCAGGAACGCTCAGGCTGGAGTCCTCATCAGTACTAACAGTCACCCTGTGCTGCGCAAGAACAGGATATTCGACGGGTTTGCTGCCGGTATTGAGATCACGAATCACGCGACGGCGACACTAGAAGGCAATCAGATTTTCAACAACCGCTTCGGTGGACTGTTTCTGGCGTCTGGCGTCAACGTCACGATGAAAGACAACAAAATCATGAACAATCAGGATGCCATAGAGAAAGCGGTGAGCAGAGGTTTTTCTGTGACTGCGGAGCAGGGACTCTGTCGAACCCGTGCACGCTCGCCGGAGAGCCCACGCACGACACAGACACGCTGTACGATTCGGCGCCCCCTATAGAGTCCAACACACTGCAGCACAACTGAAGCTCAGATGAGATCACACGCtagaaataattcaattttactCCAACAGACTCTCGGAGAGAGAAAGCGTCGCGCGAACGCTGAAaggaaacatttctatttaacaGACGTTCTGCTGTGGACTCGGCGAGGACTCAGGATGACGAGAGAAACGGACCCAGAGCGTTTAGGCTCCATGCTTCCCGTGCAGCCGTTACCGCGCTCTTGTATATGTACGGAAAAAAAAGACCCAGCACTTCAGTTTTGCTTtcatttccttttgtttttgtttttttaaagatgttgaGTTCTCGAGGTTTGATTTTAATGCTTTCTCATGTAGTTTTGTATTTTCAAGCAAAAA

Function

symbol description
fbxo11a Predicted to enable zinc ion binding activity. Predicted to be involved in protein ubiquitination; regulation of apoptotic process; and ubiquitin-dependent protein catabolic process. Predicted to be part of ubiquitin ligase complex. Orthologous to human FBXO11 (F-box protein 11).

NR:

description
F-box only protein 11-like isoform X2

GO:

id name namespace
GO:0004842 ubiquitin-protein transferase activity molecular_function
GO:0008270 zinc ion binding molecular_function

KEGG:

id description
K10297 FBXO11; F-box protein 11

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043254965.1 True 3222 mRNA 0.53 22 19505862 19532003
XM_043254966.1 False 3065 mRNA 0.53 21 19505862 19532003

Neighbor

gene id symbol gene type direction distance location
kcnk12 LOC107679129,LOC107585442,LOC107688640,LOC108430255 coding downstream 45465 19429836 ~ 19460397 (-)
golga4 golga4,LOC107724992,LOC107688375,LOC107733336,LOC107679131 coding downstream 105972 19363572 ~ 19399890 (-)
LOC122357009 NA coding downstream 239353 19258386 ~ 19266509 (-)
zmp:0000001138 LOC107733342,LOC107679128,LOC107754581,LOC107597635,LOC107585445 coding downstream 258284 19245604 ~ 19247578 (-)
LOC122357016 fbln7,LOC107679196,LOC107754577,LOC107585467,LOC107733340,LOC107688955,LOC107597673 coding downstream 261015 19222056 ~ 19244847 (-)
ntpcr ntpcr,LOC107557727 coding upstream 148242 19680245 ~ 19685333 (-)
map10 NA coding upstream 153916 19685919 ~ 19688933 (-)
LOC122356781 NA coding upstream 464646 19996649 ~ 20025261 (-)
LOC122356780 NA coding upstream 493666 20025669 ~ 20036473 (-)
irf2bp2a irf2bp2a,LOC107690807,LOC107730382,LOC107557731,LOC107728327,LOC107564236 coding upstream 569056 20101059 ~ 20103872 (-)
G95068 NA non-coding downstream 77936 19425563 ~ 19427926 (-)
G94997 mertk,LOC107724611 non-coding downstream 297593 19201843 ~ 19208269 (-)
G94978 NA non-coding downstream 335773 19169868 ~ 19170089 (-)
G94961 NA non-coding downstream 427023 19078560 ~ 19078839 (-)
G94941 NA non-coding downstream 589212 18916245 ~ 18916650 (-)
G95110 NA non-coding upstream 59869 19591872 ~ 19593376 (-)
G95147 NA non-coding upstream 137706 19669709 ~ 19670331 (-)
LOC122356282 NA non-coding upstream 286050 19818053 ~ 19835653 (-)
G95190 NA non-coding upstream 314298 19846301 ~ 19846534 (-)
G95469 NA non-coding upstream 543368 20075371 ~ 20075937 (-)
itga9 itga9,LOC107688464,LOC107679186,LOC107585444 other downstream 143821 19286030 ~ 19362041 (-)
LOC122357020 LOC107724613,LOC107679163,LOC107733343,LOC107585413,LOC107597639 other downstream 530338 18957703 ~ 18975524 (-)
LOC122356088 ate1,LOC107679187,LOC107655512 other downstream 832969 18545571 ~ 18672893 (-)
LOC122356193 slc35f4,slc35f3,LOC107664436,LOC107586844,LOC107559881,LOC107668528,LOC107747268,LOC107665565,LOC107664233,LOC107736862 other downstream 2118856 17374750 ~ 17387006 (-)
G94412 opn3,LOC107549142,LOC107665579,LOC107586115,LOC107747290,LOC107719228,LOC107676370 other downstream 3079327 16425697 ~ 16426535 (-)
disc1 LOC107666898,LOC107730373 other upstream 330527 19862530 ~ 19907062 (-)
LOC122357123 tsnax,LOC107557734,LOC107690806,LOC107564242,LOC107667162 other upstream 377192 19909195 ~ 19921669 (-)
LOC122356211 gng4 other upstream 732723 20264726 ~ 20275386 (-)
G95520 NA other upstream 947922 20479925 ~ 20486704 (-)
G95510 nid1,nid1a,LOC107691203,LOC107750138,LOC107728305,LOC107689759 other upstream 956782 20488785 ~ 20492076 (-)

Expression


Co-expression Network