wdr89 (wdr89,LOC107602933,LOC107683929,LOC107553226)


Basic Information

Item Value
gene id wdr89
gene name wdr89,LOC107602933,LOC107683929,LOC107553226
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056711.1
NCBI id CM032080.1
chromosome length 25085836
location 14557244 ~ 14562378 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043255256.1
AACGAATATATAGCGTGTCCGTCGTCGTGTCTCAGatttatgaatgtaaaaacatttttttattacaacaaaTGAAGCCAGTGTATCGTAAAACTTGAAAATGTGCCCGTGCGGAACTAATGTCCAGGGTTACTGTGTTTCCGGGGAGAAGCTAAGGAGGTGGCACGCTGATGTCTGTCAAATACGATCACATgtgCCAGGGTAAACTGTGATGATCATGGACACTCTGGAGAGCGCCTTTAAGTCTCTTTCCATCGCCAGGAGGCTGCAGCCCAGCGAGGCCACGTATATTTTGGAGCTCTCCTGTGCCAGCAGTGGCTCAGATGTGCTGGCTGTGTGCTGCTCCAATCACTCTGTGCGTCTGCACAGCAGAGAGACGCTCCGCCAGGTGGGTGACTTCCAGGGTCACACGGCTCCCGTGTGTGGGGTGCGTTTCTCTCATCTCTCCCCTCACCAGCTGTTCACTGGCTCTGCTGATGGGACACTGCGGTGCTGGGACGTCCGGCGGCCCGGTTCGGATGCCACCCAGGTGTTCCGCAGCGATCCGACGCATTCGTACTGCTCTTTTGATGTGAGCTGTAATGATCGTGTGCTGTGCGCAGGCACGGAGCAGGTGAGGGAGGACAGTTTTTTGGTGTTCTGGGATGCCCGTATGGTTCAGGGTGGAGGTGAGATGGGCCGTCTGCTGGGTGTTTATTCAGAGTCACACAGTGATGACATTACTACGGTCAAGTTTCATCCACGGCTGGTGGACCGGTTGGCTTCTGGAGCCACAGATGGGCTTGTGAACGTGTTCGATCTGAGTCTGGGTGGAGAGGAAGATGCGCTTGTCACCACATGTAACTGCAATTCCTCTGCAAGCTCCCTTTCCTGGACAGGCAAAGATCTTGACCAGCTGCTTTGTCTGACCCATGATGAAGGGCTCCACCTGTGGGACGTGGCTCACCCAGACGGCGATGACACTCTGACCCTTCTTAGTTCAGCTGACGCCCGGACACTTGTCCAGCTCCCTGACGGAGCATCGCTCGAGTACTTTGTGGGCGGTACATGGCTGTCAGACGAGGAGCGTATTCTGTTAGTGGGAGGAAGTAATCATGGAGAGCTCCACCTCCTGGACTGCAGTGGGCGTGGTCTGAGGCTCATTAAATCCCTCAAAGGGGGTCATTCGGCTACAGTGAGGTGCTTCCAGTGGGATGCGATTAGTCATTCTCTGTTGACGGGTGGGGAGGATGGACAGTTGTTGCTGTGGAAAGCAGGAGCAGAGGAAATAAGCGTGGGCAAGAAGGATTCTCTGAAAAGCATCTCCTCCATGCAGCTCAAAACGAAAGCTCACAGAAAACAAGTTGTACAGAAAGACCGCTCAAAACCGGCATGATCACATACACAGGACAAACTACTTGGTTATTTGACTAAGATACTTTGCTCTGATGCCCTTTGTTTTCATAAGGATAATAGATAAACATATGTTATATGGAGTCTAAATTAGAATCATCTgctctataaaaaatataacttattaCAGACATTGCaagtttttaaacagttttgtggttttaaaatGCGAGTTGTGAACAAAGTTGTTTGACTTGTGCAGCAGATAAACTGTCATCTGCGTGGTAGTTGTTGTCCTCGCatataacattacatttcttGCGTCTTGTCAgcaacatttgttttgaaagtgtttCATAAGTTCGCTTTTGAGGTTAAACGCATGGCTTGAAAATGATGAAATTGTCTTCTAGATTTCAGGACTCCAAACTGAAGACGTATTGtgttaaaggaaaagttcatcCAAGAGGTAGATGACTTTGTTACTTAATCAGAACGAGAAATTTTGTTTTGGGCTCTTATTACGACGGCACCCATTTGCTGCAGAAGGCCCATTGgtgaacaagtgatgtaatgcaaaatttctcaaaatctgttccaatgaggaaacaaactcatGTACATGTTGACATGAGGGTTGGTGCATTATTaaccatttgcatttatttttttactttctttaatGCATTGGGATTGTCCTGAAtatcttgtttttaaatgttttacatgtaTCTTGGAGGGCTGCACCAGCACCACTAGGATGCAAAATTAGAATCAATTATACAAAGTGCAACCATAATTGCACCATGCCAGCATTATTCTTATGCAAAGTGTTTACATTCATGGAACGAAAACGGTGGTTATGTTCTTAGCTAATGCTTTTTACGAAATCATCTGTcaagaaatgtatgttttgtgttaaaatattgtaaatgggcaaggtttttgattgttttgatCTCAAGAGCTGCAGAATTAATTATACAACTTTATAATCTAA
>XM_043255257.1
TAAGCGGAAGCAAAAAAGTTCTCTACAGGCTAAAAGAAGACAAAAGGACAGGAGTATTGGAAATATGATCATAAAGGTCAACATGGGCCTGCTATACCGCTCAAgtgCCAGGGTAAACTGTGATGATCATGGACACTCTGGAGAGCGCCTTTAAGTCTCTTTCCATCGCCAGGAGGCTGCAGCCCAGCGAGGCCACGTATATTTTGGAGCTCTCCTGTGCCAGCAGTGGCTCAGATGTGCTGGCTGTGTGCTGCTCCAATCACTCTGTGCGTCTGCACAGCAGAGAGACGCTCCGCCAGGTGGGTGACTTCCAGGGTCACACGGCTCCCGTGTGTGGGGTGCGTTTCTCTCATCTCTCCCCTCACCAGCTGTTCACTGGCTCTGCTGATGGGACACTGCGGTGCTGGGACGTCCGGCGGCCCGGTTCGGATGCCACCCAGGTGTTCCGCAGCGATCCGACGCATTCGTACTGCTCTTTTGATGTGAGCTGTAATGATCGTGTGCTGTGCGCAGGCACGGAGCAGGTGAGGGAGGACAGTTTTTTGGTGTTCTGGGATGCCCGTATGGTTCAGGGTGGAGGTGAGATGGGCCGTCTGCTGGGTGTTTATTCAGAGTCACACAGTGATGACATTACTACGGTCAAGTTTCATCCACGGCTGGTGGACCGGTTGGCTTCTGGAGCCACAGATGGGCTTGTGAACGTGTTCGATCTGAGTCTGGGTGGAGAGGAAGATGCGCTTGTCACCACATGTAACTGCAATTCCTCTGCAAGCTCCCTTTCCTGGACAGGCAAAGATCTTGACCAGCTGCTTTGTCTGACCCATGATGAAGGGCTCCACCTGTGGGACGTGGCTCACCCAGACGGCGATGACACTCTGACCCTTCTTAGTTCAGCTGACGCCCGGACACTTGTCCAGCTCCCTGACGGAGCATCGCTCGAGTACTTTGTGGGCGGTACATGGCTGTCAGACGAGGAGCGTATTCTGTTAGTGGGAGGAAGTAATCATGGAGAGCTCCACCTCCTGGACTGCAGTGGGCGTGGTCTGAGGCTCATTAAATCCCTCAAAGGGGGTCATTCGGCTACAGTGAGGTGCTTCCAGTGGGATGCGATTAGTCATTCTCTGTTGACGGGTGGGGAGGATGGACAGTTGTTGCTGTGGAAAGCAGGAGCAGAGGAAATAAGCGTGGGCAAGAAGGATTCTCTGAAAAGCATCTCCTCCATGCAGCTCAAAACGAAAGCTCACAGAAAACAAGTTGTACAGAAAGACCGCTCAAAACCGGCATGATCACATACACAGGACAAACTACTTGGTTATTTGACTAAGATACTTTGCTCTGATGCCCTTTGTTTTCATAAGGATAATAGATAAACATATGTTATATGGAGTCTAAATTAGAATCATCTgctctataaaaaatataacttattaCAGACATTGCaagtttttaaacagttttgtggttttaaaatGCGAGTTGTGAACAAAGTTGTTTGACTTGTGCAGCAGATAAACTGTCATCTGCGTGGTAGTTGTTGTCCTCGCatataacattacatttcttGCGTCTTGTCAgcaacatttgttttgaaagtgtttCATAAGTTCGCTTTTGAGGTTAAACGCATGGCTTGAAAATGATGAAATTGTCTTCTAGATTTCAGGACTCCAAACTGAAGACGTATTGtgttaaaggaaaagttcatcCAAGAGGTAGATGACTTTGTTACTTAATCAGAACGAGAAATTTTGTTTTGGGCTCTTATTACGACGGCACCCATTTGCTGCAGAAGGCCCATTGgtgaacaagtgatgtaatgcaaaatttctcaaaatctgttccaatgaggaaacaaactcatGTACATGTTGACATGAGGGTTGGTGCATTATTaaccatttgcatttatttttttactttctttaatGCATTGGGATTGTCCTGAAtatcttgtttttaaatgttttacatgtaTCTTGGAGGGCTGCACCAGCACCACTAGGATGCAAAATTAGAATCAATTATACAAAGTGCAACCATAATTGCACCATGCCAGCATTATTCTTATGCAAAGTGTTTACATTCATGGAACGAAAACGGTGGTTATGTTCTTAGCTAATGCTTTTTACGAAATCATCTGTcaagaaatgtatgttttgtgttaaaatattgtaaatgggcaaggtttttgattgttttgatCTCAAGAGCTGCAGAATTAATTATACAACTTTATAATCTAA

Function

symbol description
wdr89 Orthologous to human WDR89 (WD repeat domain 89).

NR:

description
WD repeat-containing protein 89

GO: NA

KEGG:

id description
K24758 WDR89; WD repeat-containing protein 89

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043255256.1 True 2332 mRNA 0.46 3 14557244 14561719
XM_043255257.1 False 2243 mRNA 0.46 4 14557244 14562378

Neighbor

gene id symbol gene type direction distance location
ppp2r5eb ppp2r5eb,ppp2r5e,LOC107736817,LOC107683621 coding downstream 1393 14536645 ~ 14555851 (-)
kcnh5b kcnh5b,kcnh5,LOC107736800,LOC107683602,LOC107654906,LOC105897728 coding downstream 32442 14490704 ~ 14524802 (-)
syne2b syne2,LOC107602924,LOC107683575,LOC107736849,LOC107553183 coding downstream 74205 14393659 ~ 14483039 (-)
trim9 trim9,LOC107553220,LOC107654940,LOC107683494 coding downstream 223432 14315230 ~ 14333812 (-)
pygl pygl,LOC107736703,LOC107683467,LOC107602977,LOC107553219,LOC106611459 coding downstream 242376 14307030 ~ 14314868 (-)
sgpp1b sgpp1,LOC107726595,LOC107602978,LOC107683631,LOC107553224 coding upstream 1011 14563389 ~ 14576348 (-)
syt16 syt16,LOC107726601,LOC107602979,LOC107683639,LOC107553223 coding upstream 14529 14576907 ~ 14600263 (-)
snapc1b snapc1,LOC107726585,LOC107602935 coding upstream 39086 14601464 ~ 14606081 (-)
ifi27.1 NA coding upstream 45002 14607380 ~ 14608640 (-)
LOC122356918 NA coding upstream 47969 14610347 ~ 14613352 (-)
G93905 NA non-coding downstream 367340 14187539 ~ 14189904 (-)
G93879 NA non-coding downstream 626950 13761046 ~ 13930294 (-)
G93855 NA non-coding downstream 868618 13685947 ~ 13688626 (-)
G93591 LOC107705361,LOC107654976,LOC107602941 non-coding downstream 890984 13665809 ~ 13666260 (-)
G93588 LOC107654976,LOC107553194,LOC107602941 non-coding downstream 893333 13661750 ~ 13663911 (-)
G94003 NA non-coding upstream 310054 14872432 ~ 14873014 (-)
G94016 NA non-coding upstream 418618 14980996 ~ 14995700 (-)
G94063 NA non-coding upstream 717029 15279407 ~ 15284055 (-)
G94132 NA non-coding upstream 1042309 15604687 ~ 15605713 (-)
G94145 NA non-coding upstream 1077897 15640275 ~ 15640633 (-)
srsf5a srsf5,srsf5a,LOC107683426,LOC107602962,LOC107654954,LOC108411053 other downstream 392830 14160323 ~ 14164414 (-)
LOC122356235 LOC107705430,LOC107683441,LOC107553204,LOC107602960,LOC107654922 other downstream 474454 14079532 ~ 14082790 (-)
G93875 LOC107680680,LOC107739875,LOC107576479,LOC107553198,LOC107705377,LOC107654967 other downstream 645407 13910339 ~ 13911837 (-)
LOC122356386 LOC107654968,LOC107705418,LOC107602947,LOC107680458,LOC107739873 other downstream 652542 13898258 ~ 13904702 (-)
map3k4 map3k4,LOC107654971,LOC107705416,LOC107679660,LOC107739870 other downstream 838930 13693026 ~ 13718314 (-)
lmbrd1 lmbrd1,LOC107747273,LOC107736841,LOC107664263 other upstream 462454 15024832 ~ 15099233 (-)
col9a1b col9a1b,LOC107736853,LOC107664283,LOC107747286,LOC107665560,LOC107747272,LOC107736861,LOC108429279,LOC107564679 other upstream 664954 15227332 ~ 15253357 (-)
G94128 NA other upstream 1002239 15564617 ~ 15583917 (-)
G94147 NA other upstream 1079653 15642031 ~ 15642503 (-)
zgc:123010 LOC107601052,LOC107747265,LOC107719217,LOC107665557,LOC107702739 other upstream 1123892 15686270 ~ 15720816 (-)

Expression


Co-expression Network