arid4b (arid4b,LOC107690809,LOC107557720,LOC107667027,LOC107728306)


Basic Information

Item Value
gene id arid4b
gene name arid4b,LOC107690809,LOC107557720,LOC107667027,LOC107728306
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056711.1
NCBI id CM032080.1
chromosome length 25085836
location 20150458 ~ 20218900 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043255557.1
CCTCGCTTATGAattatgggaaatgtagtttacGTCAGCATCGTGTGTTGCGTCGTCCCAAAGCGAGCGGGTCCCTTCAAAACCTACAAGTCCCATGCATCTTTGCGGTTAAAGGAAGGCCGAAACGCGTTAACCGCCAATAGAAATCGGTCGGGGCGGATCCACAGTGGGAGGTTTGTGTATCCTTCAGTCCGTTTCAGAAGCGGAGAGGATTATCGCCGAAAACGAGTGCGATTGCGGAGCGATTTCGTCGGATTCGCATCCCGACACCTTCCCTTACATTTTCGGACGACGTTTCCAACGCCGATCGTCGATGGTTTCCCGCGATTCTCCAATGGATTACTAATTCGCCGCAAGAACATCGCTATCTGTCGGATATATCAGACGCTGGAGGAGCCCCCTTACCTGACCGTTGGCACTGACGTGAGCGCCAAGTACAGAGGGGCGTTCTGTGAGGCCAAGATCAAGACCGCCAAGAGACTCGTCAAAGCAAAGGTCACCTTCAAACCCGACTCGTCCACTGCGGAGGTGCACGACGAACACATCAGAGGAGTGCTGAAGGTGGGCGCTGTGGTGGAGGCCAGAAACCAAGATGGGATTTATCAGGAGGCCACCATCAACAAACTCACGGACGCTAGTTTGTACACCGTCGTGTTTGATGACGGTGATGAGAAGACCCTCAGGCGCTCGTCTCTTTGCCTGAAAGGAGCGCGACACTTCGCCGAGAGTGAGACGCTCGACAGGCTTCCTCTGACGAACCCCGAACACTTCGGCACTCCTGTCATCGGCAAGAAAGGAAACCGCGGAGGCCGGCGCTCCAATCCCATTCAAGAAGAAGAGTCGTCTTCATCGTCtagtgaggaagaggagggcgACCAGCAGCAAAACGAAGAGCTTCACGGCAAAGTGGTGTGTGTGGACGGAGTGGTCTCCAGTGACAAGAAGAAGAGCACATGGTATCCTGCGCTGGTCATCTCTCCAGACTGTCATGAAGATGTGACGCTGAAGAAAGACAACGTTTTTGTTCGCTCCTTCAAAGACGGCAAATTCTACACAGTTTTGCGGAAAGACGTTCGAGAGCTGGACGAAGAGAAGGCTCCTAAAGCGGACGCAGGACTCAAACCAGcattagATGCAGCCTGGGATTTCCAGCGTAACGGCACTGTGCCCAACACGTGGAGGACGGAGGTGAAGGATGACAGCTCCAGCagtgaggaggaggatgaggaggaggaggaggagcaggaggaagagGCCAGCAGCGAGGAGGAAGAGGAGGAAGTAGAGCCGTTCCCAGAAGAGAGGGACAACTTCCTGCAGCAGCTGTACAAGTTCATGGAGGATAGAGGAACTCCTATCAATAAGCGTCCGGTGCTGGGCTACAGGAATCTCAATCTGTTTAAACTCTACAGACTGGTGCATAAGCTGGGAGGATTTGACAACATCGAGAGCGGATCAGTCTGGAAGCAGGTGTATCAGGATCTGGGCATCCCCGTGCTCAACTCTGCAGCCGGGTACAACGTCAAGTGTGCCTACAGAAAGTATCTGTATGGCTTTGAGGACTACTGCTCCTCCACGGGAATCACCTTCCGCATGGATCTGCCGCATAAGACGGCGGAGAGGACGAGCTCAAAGAGCGAGGTGAACGCGGAGGAAACGGCCAGCAGTGGAAACGCTGTCTCTTTAAGCACACCCAGCGCAGGAGATGAACAGAAAGCCCTCAAAGAAGCAGAGAGCTCCAGCACACAGCATGTGCTCGAGGAGGAGAAGGAAGAATCCACGGCACGGTGCGAAGAGAAAACGGACATCAGCGGCGTGAATGAAGTGGATGATAACCACGTTGATGAAGAGGAGAGCGATACGAAAGAGGAGGTCCGAGAGAGCGTCCCGACAGAGCAGAGTCCCGTCACTGAGAGCGTGAAGGAGGAACCGTGTGAGGAGCACGACAACAAAGATCTGTCAGGGGATGTCAGCAGTCAGGAGTGGGAGGAAGGGGAGGAGTTTGAGTGTTACCCTCCTGGGATGAAGGTGCAGGTGAGGTATGGGCGAGGCCGCAATCAGAAGACGTACGAAGCCACTGTGAAAGAGTCAGACCTGGAGGGGGGAGAGGTGCTCTACCTGGTGCACTACTGTGGCTGGAACGTCAGGTATGATGAGTGGATCAAAGCCGATAAGATTGTCAGGCCCGCCAATAAGAATGTCCCTAAAATAAAGCACcgcaaaaaaataaagAATAAAGCTGAACGAGAGAGAGACCGAATAGAGACAGACGGAGACGATCTTCCTTCCTCCAAGAATCGCATCAACCGATTGTCCAAACCGAACTCTGGCAGCGATGCCTTCTCCACGATGGAGGAGTATGGCGATAAAGGCGGCCAGCAGATGCCCATCAAACCCATTGAGATCACATCCATTCTCAACGGCCTCCCAGGCTCTGAAAGCTCCACAGACGACAGCGAGCGAGAAGACGACGGAGACGCCGATCACGACGAAGAGGATCATCCAGGAGCTCGAGCAAGCCTTCGGAAAGCAGAGCACTGGGAGACGCCGTCCGATGCCTTCAAAGCCCCCGCGGTCGCTCACGAGGAGCCGAGCGTCCAGGACGGCCCCGAAACGGCAAAGCGAAAGGGCCAGATTGAGCTGGAGCTCGAAGCTTCTGGCGGCAGGAGAAAAAAGACTGAAGGCGAACGTGCTTTAAAAAGCCCGGCGAAAGGCAAAACTAGAAGCAGCAGAGCAGGCGATTGGCTGCCGGGTAGTTCGCCCAAAAAGTTAGAAGAACGAGGGCCGGTGGAGGAGAGAGGCGCTAGATCGTGTAGCAGCTCTGAAGACGAAGCAGATCCTACAACAGAACCACACACCAAGGAAGAGCCAAGAGGAAATCCCAAAACCAAGGGCTCGCCTTCAAAGAAATACAACGGAGTGAAGGAGAAGAATAAAAGCGGGCGTTCGGGATTCTGGGAGATCCCGGAAAAAAGAGCCAAAACGTCCACCGCGCTTGAAGAAAGGTCGCCCAGCTGCCGTACCAAAGGTCAGAAAGACGTGTGGTCCAGTATCCAAGTTCAGTGGCCCAAGAAGACCCTAAAAGAGCTGTTTTCAGACTCTGATACCGAGGCGGCCAACTCTCCTCCGCCCGCCGTGACGGCCCCGGACGAGTCCTGCGTGGAGCTGTCCCGGGACGAGGAGATCGGCGAGGACAAGCTGCAGGAGCATCCCAGCAGCGGCACCAACTCGGTCCTCAACACGCCCCCGACGACGCCCGAGTCGCCCGCCGAGGTCCGAGCGCCGTCTCCGCCCGCGCTGCCCGCCAGCCCTCCGCCCGCCCCGTCGCCCGCGGGAGCGCTGACGGAGGAGCAGGCGGGCGGCCGCAGCGAGTCCGACAGCAGCACGGTGGAGGTGGAGAGTTTGGGCGGAGAGATCCAGGAGATTCCTCCAGAGGAGGGGGCGGGCTCCCCTTCCAAGGCCTTCGATGGAAACCTGTCATGCAACAGTAACAGTAACTGTAGCCTGACGCTGAGCAGCTGCAGCCAGCAGGAGAACGAGCAGAAGAATAAAGCCTCATCCAGTCAGAAGCGGCCCAAGGAGTCTCAAGGCGGTGGAGCGTCAAAGAAACACAAGCGCAGTCATAAAAACCTGAGCTTACATCCCAAGAAGAACCGCAAACCAGCTCACAGCAGTGACAGCGAGGACCAGTGTATGAGCGAGAGCACTGCCAAATCTCCCACGACCAAGAGCAGCAGCGAGCTGAAGACCTCAGGCCACAAGTACCAGAAACACGGCGATCCGGAGCACTCCCACGGCCGGAGCAGGTGGAGCTTCCAGATGTCGGACCTGGAGAAGATGAACAGTCTGGAGCGGATAGCGTTCCTTCAGGAAAAACTGCAGGACATCAGGAATCACTACCTCCTGCTCAAATCTGAGGTGGCCTCCATCGACCGGAGACGCAAGCGcatgaagaagaaagagagagagaGCGCAGCAGCGGCCTCTTCCTCGTCCTCATCCTCGCCGTCCTCCAGCTCTCTGACGGCGGCGGTCATGCTGACTCTGGCCGAGCCCACGGTGTCCGGTGCGCCGCAGACCTCGGGGCTGTCCGTGGAGTGCAGGTGACAGCAGCGGGACGCCGGCGGCGAGCACAGAGCACTTAACCAGCACCCCCAGAGACACGGCGGCGGGACGAAACCATAGCCACCAGACAGCAACAAGCACTATTTTATATCGACAACTGTTTCCTTGGCAAGCTAATCGCACTcaagtgcactttttttctgagagtcgTGGGTGGGTTCGGGTTTGACAACGAGACAAAGACTATTTCCGTTCGTTCGTGCGTTCGTTTTACAAACCGATCCCATCTTTTTTGACCGTTTGATTCTGTCTTTTGGATATGAATTCATCTACAGTGAGAGAACGCTGTAAAGCCCCCTCGGATCCACCGCTAGCACGTCGCTCCCGGGCCGGAGCCGCTCCAGAGAGATCCGCTGGCGGTGCCTTACGCTTCGGGCACTCGTGAGGAATGCTGGGAAACGCTCAGTGCTGGCTGACCTGTGTGTGTTTCGTAACAGAGCCCAAACAGAACgcctgcttttcttttcttttctttttaatcataACACGAATTTAGGAGTCTGTCCAGGTCATATTTTACCCTaaagttgttatatttttttttttgtttacataatgtgtgtgtgtgtgtgtgtattaaccatgtatgtatatatatatatatgta

Function

symbol description
arid4b Orthologous to human ARID4B (AT-rich interaction domain 4B).

NR:

description
AT-rich interactive domain-containing protein 4B-like

GO: NA

KEGG:

id description
K19195 ARID4B; AT-rich interactive domain-containing protein 4B

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043255557.1 True 4732 mRNA 0.55 24 20150458 20218900

Neighbor

gene id symbol gene type direction distance location
tomm20a tomm20a,LOC107690811,LOC107728308,LOC107667141,LOC108247505 coding downstream 4990 20142549 ~ 20145468 (-)
LOC122357145 NA coding downstream 6731 20143596 ~ 20143727 (-)
irf2bp2a irf2bp2a,LOC107690807,LOC107730382,LOC107557731,LOC107728327,LOC107564236 coding downstream 46586 20101059 ~ 20103872 (-)
LOC122356780 NA coding downstream 113985 20025669 ~ 20036473 (-)
LOC122356781 NA coding downstream 125197 19996649 ~ 20025261 (-)
b3galnt2 b3galnt2,LOC107730378,LOC107667096,LOC107728324 coding upstream 26587 20245487 ~ 20264253 (-)
lyst lyst,LOC107691204,LOC107728318,LOC107689764,LOC107569426 coding upstream 56877 20275777 ~ 20345682 (-)
nid1a nid1,LOC107691203,LOC107750138,LOC107689759,LOC107728305,LOC107575665 coding upstream 128247 20347147 ~ 20502648 (-)
eif2ak2 NA coding upstream 302747 20521647 ~ 20542635 (-)
LOC122356970 gpatch11,LOC107689758,LOC107562390,LOC107708600 coding upstream 323875 20542775 ~ 20546992 (-)
LOC122356209 NA non-coding downstream 9500 20108191 ~ 20140958 (-)
G95469 NA non-coding downstream 74521 20075371 ~ 20075937 (-)
G95190 NA non-coding downstream 303924 19846301 ~ 19846534 (-)
LOC122356282 NA non-coding downstream 314805 19818053 ~ 19835653 (-)
G95147 NA non-coding downstream 480127 19669709 ~ 19670331 (-)
G95506 NA non-coding upstream 17778 20236678 ~ 20238227 (-)
G95519 NA non-coding upstream 295873 20514773 ~ 20515311 (-)
G95524 NA non-coding upstream 299700 20518600 ~ 20520093 (-)
G95537 NA non-coding upstream 401147 20620047 ~ 20620719 (-)
G95535 NA non-coding upstream 402362 20621262 ~ 20678269 (-)
LOC122357123 tsnax,LOC107557734,LOC107690806,LOC107564242,LOC107667162 other downstream 228789 19909195 ~ 19921669 (-)
disc1 LOC107666898,LOC107730373 other downstream 243396 19862530 ~ 19907062 (-)
itga9 itga9,LOC107688464,LOC107679186,LOC107585444 other downstream 788417 19286030 ~ 19362041 (-)
LOC122357020 LOC107724613,LOC107679163,LOC107733343,LOC107585413,LOC107597639 other downstream 1174934 18957703 ~ 18975524 (-)
LOC122356088 ate1,LOC107679187,LOC107655512 other downstream 1477565 18545571 ~ 18672893 (-)
LOC122356211 gng4 other upstream 45826 20264726 ~ 20275386 (-)
G95520 NA other upstream 261025 20479925 ~ 20486704 (-)
G95510 nid1,nid1a,LOC107691203,LOC107750138,LOC107728305,LOC107689759 other upstream 269885 20488785 ~ 20492076 (-)
G95511 NA other upstream 274742 20493642 ~ 20496864 (-)
G95526 NA other upstream 351138 20570038 ~ 20571562 (-)

Expression


Co-expression Network