pwwp2b (pwwp2b,LOC107670800,LOC107754010,LOC107744923,LOC107653191)


Basic Information

Item Value
gene id pwwp2b
gene name pwwp2b,LOC107670800,LOC107754010,LOC107744923,LOC107653191
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056711.1
NCBI id CM032080.1
chromosome length 25085836
location 22041455 ~ 22051686 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043255712.1
AAAGTGATTCAGTGCTTTAATTCATCTTAATCATTCTAATGAAGCACATCTGAAGGGTTTTGGACTCGTCTTTTAAGTTTAAACAGACCACCGTACACTAAATCTATTATTATGAGAACACTTCATTTGCTTATACAGAGAGAGGgcatgtgttttcatttaattgtgtgATTAATAATTCCACAGCATTtgatatataaagatttttctGGCTACAACAAACTAAatcatgcacaaaaacacactcaatGCAGGAGTCtgatttttgtgaataaaaggCATGTTCCTTCATGAAGACTGAACTGGACCTTACACAAACAGGAGAGTTCCTCATGAGATACTGCTGGTTATTATCACAGGAGCATGCTTCGTACTGTTGGGTAAAACCTAGTAGTTTGAAGGATAGCGACGAAtctttaaaatgactgaatttaAACAAAAGACCCTTAAAACTGTTAtctgtgtctctggagcacagtTCTATTCGTAGAAATACACAGCTTGAGGCACATGCATATAGTTTCCTAAACCATCAGGATATTAAGATCGTGCTGTCGGATTTCCTATATATTAGGGATATTCatctttaaaggagatttttttcTACCAGCATAGATTCTTTTCCAGCAGCTTTCAGGCGCCCTATGATCCTCAGTCTCGCTCCGTGACTCTGAATGCTCGTGAAAGAGCGATCACGAAACGAACGGGCGCGCGCTCTGACGGACTCGGAGCGTCTCCCGAGCTCGATGACGAGCTCGGCTGGTGATGTCACCGCGGACGGATCGTCGTAACGCGTCGGCGGAGCTGATGGCGTCACTGCGCGTCCCGAGCGCGCCGGCGGATCTCAGCAGCGGAGAGCGACGCGACCGTGGCTCCGGCGGCCGGGATCGAGCGACGCCCAGCCGGACACCGAGCGAGGAGACGATGGAGGCTGTAGCGGAGGAGCTGCGGGCCGGCTCCCGGATCCCGGTGACCGTCGAGCAGATCGTCAACGACACGCTGGTGGTGACGCTCACGTACCGGGAGAGGAGCTACACCGGCATCCTGCTGGACTGCGGCAGAAAGACTGGACTGTTTTGCCTTCCAGATGTTGTTGGAAAATCCGAAGAGAGCCTCATATTGAGACCGGACTGTGAAGTCTCGAGTGAAGAGGCTTCCTCTAAACCCGTTAGTCAGCCGACACAGCGACCAAAAGATGAAAACACGGAGCCTGAGATGGCAACTCCTCCCGCTCCCGTACCTATCCCGGTGCAACCGGGTCAGCCCACGTATCCGCCGTACTTCGAAGGAGCGCCGTTTCCGCAGCCCATGTGGGTCCGGCATACATACAACCAATGGGTACCGCAACCGCCGCCGCGTCCGATCAAGAGGAAGAAAAGACGAAGTCGAGAACCTGGAAGGATGACCATGAGCACGATCCGACTGAGACCTCGGCAGGTGCTGTGCgagaaatgcaaaaacacactaAATAGCGACGAGGAGAGCAAAGATGGACCAACGGTGCCCAAAACGTCCAGGAAGGAGAATGCTCCTCAAGACGAGGATGACTCTAAAGCGACTCCGGTCAAGAGGAAGGACGACGGAGACGGCATCAACAAAGAGTCAAAGAGACGAGAGGAATCGACGGCGTATGACGGCAAGCGCTTCCGGAAGGACAAGAAAGACGATGAGAAGTTTCCCAAAGGGGACGTCGTTCCCCACAGTCCCGTGATCAAGATCTCTTACAGCACTCCGCAAGGTAAAGGCGAAGTGATGAAGATCCCCTCGAGAGTCCACGGCTCGGTCAAACCCTTCTGCCCAAAGCAGCTTCTGCAGAACGGCCACAGAGAGCAGAACGCTTCCAAGGAACCCCAGAAAGTCGTGCAGACTCCTGTAGACGCCATACGAACGGGTCTCACCATTTCCATTCCCAAACTCAAGCTCCCAAAGCTGAACAATCCGGACGCCCCTTCGCCCAAGATACGCTTGAGATCCCGGGCCGACGGAGCGGAGCAGGTGTCCGTTTACGAGGCGGAATTGGTGGACGGCGTTCGGAGGAAGAGTCCGAGAGTTCCCAACTCTCAGTCAGAAGACGGTGCGGAGAAGAATTCGCTGGAGCTTTGGTCGGGCGAGGAAGTGGAACGGCACGGCGACTTGACTTTGCTCATCAACTTCCGGAAGAGAAAAGCAGACTCCTCCAGTCTCTCGGTGTGCAGCAGCGACAGTCTAGATGAGTCCAAGTCGTTCAGCTCTGACGGAACATCACCGGAAATCTGCGATCTCGCTCCGGGCGACGACATCTCCGTGTCGTCTTCCTCTCACGGGGAAAGCAAGACTGTTCCGCCTCTAACCGTGCGACTGCACACTCGCAGCATGACTAAATGCGTGACCGAGGAAGGTCATGCCGTAACGGTGGGCGACGTCGTCTGGGGGAAGATCCACGGATTCCCCTGGTGGCCTGCGAGGATACTCAGTATTAGCGGTATTCGTAGAGAAGAAGGCGAGGTCGATGCTCCCTGGCCCGAAGCTAAAGTCTCCTGGTTCGGATCTCCCACCACCTCCCAACTCTCGGTTGCCAAACTCTCGCCGTTCCGCGAGTTCTTCAGGTCACGCTTTAACCGCAAAAAGAAAGGGATGTACCGCCGTGCCATCATGGAGGCCGCCAAGGCGGTGGGACACATGGGTGCCGAAATCACATCTCTGCTGGCTCACTGCGAAACTTAGTGGACGAGGACAGACTGGACTGGCTGTCATTCAGGGTTTTGCAGGCGCTCCCAGGACGTGGCGGTCTCCCCGGACGGAGAGCGCCTTCATTTGCCACGGATATCATGAGGGAAGGTGCTTTATTTCCCCAAACACGCGGCTGGAGGAAGAAAAGGCGGCGCGCGGACCGCCTTCGAGGGCCGCGAGGAGAACGCGGGAACCTCGGAGCGAACTATTCCCCCGTTTGTCTCTCcgtctttcttttgtttgttttttaggaCGTACATTATATTAGAACAAGTAGCTCGACACTAAATCCGaatgtatttattcacaaaaaaaacacaaaaaaacaaaaaacaaacactcgACCGGTGACTGGCCTCCTGTAAGATCACACTGCTGCTGTTTCTTATGACTCTTACGTCCGTTTAGGATCCGAGCGGAACGACGAATATCCGTATTATTATACAGAACGACGAGTCTTACTGTGTCTGTTTCTTCAGATTATGAAAATGTGAACTTCCTTTTTGCATCATGTAGGTCTTACACCATGCAGTATGTCAGTTCGTCCGTCGCTTCACTTTCTCTGTCCTTTCCTAGAAATATATCTCTCGTATGTCTCTCCATCCTCTTCTTCACTCTTGATTATGTGatgttttgctttaattatttaatgtgtcACGATAAGAGAAGCACTTTATCCGTACCTTGGTGGCCTGCTGTGAACACTAGCTGGAGTTTGCAGACTCTCGGAGGAGCCAACCCATCGCTTttgaagtgattttttttttttttagtttttaatgatgCAGATTTCAATTAAAGGACGCTTTCAGGAAGTTGTGTACACTGTATTCTCACGTTTAGCCCAGTTTACGTTGCTTTCCTCCTTTATGAAATGTTCCACTGGAGATCTGGAGAGAACTGTACGCTCCTATGCACCGTCTCttttattaaagcataaaaagca

Function

symbol description
pwwp2b Orthologous to human PWWP2B (PWWP domain containing 2B).

NR:

description
PWWP domain-containing protein 2B

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043255712.1 True 3655 mRNA 0.51 3 22041455 22051686

Neighbor

gene id symbol gene type direction distance location
LOC122356328 inpp5a,LOC107744939 coding downstream 16845 21908358 ~ 22024610 (-)
valopa valopa,LOC107689369,LOC107688178,LOC107754013,LOC107745034 coding downstream 174557 21847430 ~ 21866898 (-)
trnag-gcc_71 NA coding downstream 467134 21574251 ~ 21574321 (-)
trnag-gcc_70 NA coding downstream 627584 21413800 ~ 21413871 (-)
LOC122356942 LOC107689348,LOC107663569,LOC107750139,LOC108426858,LOC562831,LOC108262825,LOC107567011,LOC105926138 coding downstream 718452 21269350 ~ 21323003 (-)
srfb LOC107689574,LOC107570739 coding upstream 105979 22157665 ~ 22183174 (-)
ptk7b LOC107672339,LOC107577581,LOC107742082 coding upstream 133354 22185040 ~ 22227004 (-)
zmp:0000000755 LOC107672344,LOC107742077,LOC103371009 coding upstream 202493 22254179 ~ 22283646 (-)
slc30a10 slc30a10,ypel5,LOC107672346,LOC107601641,LOC107568027,LOC107683860,LOC107568031 coding upstream 265554 22317240 ~ 22323509 (-)
LOC122356263 ypel5,slc30a10,slc30a1b,LOC107568027,LOC107672346,LOC107601641 coding upstream 433603 22485289 ~ 22489323 (-)
G95903 NA non-coding downstream 1349 22039782 ~ 22040106 (-)
G95899 NA non-coding downstream 166526 21874513 ~ 21874929 (-)
trnag-gcc_72 NA non-coding downstream 387774 21653612 ~ 21653681 (-)
G95715 NA non-coding downstream 546302 21487514 ~ 21495153 (-)
G95643 NA non-coding downstream 1037804 21002627 ~ 21003651 (-)
G95902 NA non-coding upstream 63010 22114696 ~ 22120442 (-)
G95922 NA non-coding upstream 84250 22135936 ~ 22136391 (-)
G95934 NA non-coding upstream 122640 22174326 ~ 22244477 (-)
G95933 NA non-coding upstream 176498 22228184 ~ 22230539 (-)
G95938 LOC107711401,LOC107568028,LOC107683865 non-coding upstream 196370 22248056 ~ 22370625 (-)
G95646 adgra1,LOC107750141,LOC107567015,LOC107663568,LOC106903219,LOC107720869 other downstream 861238 21007472 ~ 21180217 (-)
G95526 NA other downstream 1469893 20570038 ~ 20571562 (-)
G95511 NA other downstream 1544591 20493642 ~ 20496864 (-)
G95510 nid1,nid1a,LOC107691203,LOC107750138,LOC107728305,LOC107689759 other downstream 1549379 20488785 ~ 20492076 (-)
G95520 NA other downstream 1554751 20479925 ~ 20486704 (-)
LOC122357128 NA other upstream 85702 22137388 ~ 22143970 (-)
tmem254 LOC107689576,LOC107653189,LOC107742085,LOC107711410 other upstream 100056 22151742 ~ 22156859 (-)
klc1b klc4,LOC107742075,LOC108263390,LOC106963894 other upstream 179763 22231449 ~ 22250313 (-)
G95932 NA other upstream 184418 22236104 ~ 22238570 (-)
G95936 lbh other upstream 244655 22296341 ~ 22297227 (-)

Expression


Co-expression Network