LOC122356860


Basic Information

Item Value
gene id LOC122356860
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056711.1
NCBI id CM032080.1
chromosome length 25085836
location 18777668 ~ 18780239 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043255932.1
CATTAAATCTTGGAGCAAATTTTAAGTGTTACATCATCCAATTGTTACTTATTCACAAAGGCTgatttttatagttattgttactGATGTACTGCTATGAAACTgctatgaaaaatattttataaactcttttgcttttccttgcataattacatgcaaacaCGAACCTTCTTTATTCCTACATTTGTTTGTCGCATTATAAAATGGtttaatatcaattttatatatgtaaagaGTGCTAAATATCAAAGCAAATGCTCCAGGATCGCATCAATGGCTTGATGTTATTTGATATTAAGTTTTATTAGCTATATTTGAAGTTATTTCTCCTCAAGTTCACACAGGCGACCTAGCAGAGCAACCACGTGCAGATCGACACATCGCTTCAAAATACTCGATCTTTTCTCTTCAGCACtgtgtatattgtttttaatatttccacTGACCCAAACGAATATTTTTAAAGCGTCGAGCTTGAAAAGCGTGCTATCGCTAATCGTCGTGGCGAAATATCTGCCGCCTGAGCGCTAGATGGCGCTGTTTCGAATTTCCGCTTAGAAGAACTTAAAGCCGTTCCTGTGACGTGGCTGCGCTGCTATGGTGACCAGAGAAGCGTTCGAGCCTTTGAAGAGCAGATTAAGGCGCGAATAAGTATTACgaaacaaaaattcaaatagTATTAACTTGCGCTTGTTATACCACACCAACTAAATATGACGGAGCTGTAAACCAAATCGTTCAAATCCATAAAGTAGCTTAGACCACAGTTATTAATGGAGCGTATTAGATCGATTTCACCCCTCCTGCATTTGGATTTAGACAACTTCAACTCTCCTGAATCCGAAGACAGCAGATACGTTCTGACGAGTCCACGTTCACTTGAAGCCTGCGCAAGATTGGGAGTGAAACCTGTTGAATTGTTGTTCAGATCCCTCACAGACTTTATTGATGAAAACCAAAAGTCCTCTCTGGAGGAAGTGACCGCTGTATATGAGGAGTACGAGAAAGGGAGAAGGGAACGACTTCGCTCGTGtcgagaggagagagagaggatcaTACAGGAGGGCTGGAATAGAAAGTCATCTGTAAAGCCATTCACGGCCCTGGAAACCGTCCCAGAGCAAACAGCTGAGAGCCAAAGCGGCGAATCCAAAGCCAAATGTCCAAGCGATTGCTCGAAGTCTGCGATTTCGATCTCAGACGGGCTCGCGGCCGCACGAGGCCAGAGGTTTCCCACCAGTTTCAGTCTGGCCGACCTCCGCCGATCTCCTGCGACGGAGCGTCGTCTGAAGAGCCTCTCGCAGGAGATCGGTCGCAAGCTAAGCATCGCCGTCCCAGAAAAAGATCGCAAGATTGCTGCGTTGATGCTGGCCAAGCACGAAGAGGAGCAGTCCCGCTTACGCCAGAGCGCGCTCGAGGAGCAGCATCGCGAAGAGGAGCGCAGGCGCGAGGAGGAGCGGCGAGCCGACATGGAGCGGAAGCGGCGCAAAGAACTTCTGCGGCATATCCGCCGTTGGCAGCAGGATCTGGAGGAGCGGAGGAGGTTGAGGGAAGAAGAGGAGGTGGTGCTCGCGGAGGAGCGCGAGCGGGAGACGCTTCGGCAGGAGGAGCGCTGGAGGAGGCTCTCCGAGGAGCAACGAGCTCGACGCAGGTTCAAGCTTGATGTGGCGAGCAGGGACGCAAAGGAGCGCAAGCGCTACCAACAGAGGCTCCTGCGGGAGAAGGAGCGCATTGAGGAGGCGCAGCGAGAGGAGCAGCTGCAGGAGGCGCAGGAAAAACAACGCCACGCAGCGAGGAGCAAGCGAACGCAGGAGAAGAGAGAGCGGAGGAGACTCGAGCGGGAAAACCAGAGGGAGCTGCTCAAACACCTCCTCctgaaaaaggaggcggaggAGCAGGAGCGGGCGGAGAAGGAGCTCAAGCGAAAAGGGCTGGAGCGGAAGCTGCAACGCTCCGAAGACAACCACGCGTCGCTTCTAAAGGCGCGGGTGCGGGAAATGCAATCGCGCGCTGAGAAAGAGGAGGAGCAGATCCGGGCGGCGCAGCAGCGGGCGAGGAGGGAGAACACGGAGAGGACGGAGCAGATGCAGACGGAGCTGCAACGCTGCCAGCTGCGGACGGAGCGCGCGTCGATGCAGGCGCAGGAGCAGCGGCGGAGGAGAGCTCAAGGCGTCAGGCGAGAAAACCAGGAGAAGCAGCTCAGCCACAGCAGACTGCGCGAAAGAGTCCTGGAGGAGGAAAAAGCGCAGCGGGAGGAGAGGAGCAAGGCCCTGGTGCTGAAGGACGAGCGCAGGGAGAGGCTGCAGAGAGAGAGGGCCGAGGCCCGGGAGCAGAGCCGGAAGGTGGCTCACGCCTCCTGCTACATGAGGGAGAGGGTGAGGGAGCACACGGCCCGTCGCAGCTTTGACCAGATGGCACGAGAAGCACAGCTGACCGCTCAGCTGGCCGGCCTCAAACTACGAGTAGTGTAGAGCAAAACAGAATCATGACAGCATTAATAGACGCCGtgtttgaaagcaaaagtcTCCGGggcatatttgtagcaatagccaaaaacacGTTGTGTgggtat

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043255932.1 True 2572 mRNA 0.52 1 18777668 18780239

Neighbor

gene id symbol gene type direction distance location
LOC122356886 ate1,LOC107724575,LOC107679187,LOC107655512,LOC107597680 coding downstream 34126 18706349 ~ 18743542 (-)
LOC122356087 ate1,LOC107655512 coding downstream 192552 18574784 ~ 18585116 (-)
fgfr2 fgfr2,LOC107724577 coding downstream 273391 18458198 ~ 18504277 (-)
ftr69 LOC107597643,LOC107679211 coding downstream 393958 18380035 ~ 18383710 (-)
LOC122356930 NA coding downstream 397645 18373868 ~ 18380023 (-)
slc29a1a slc29a1a,LOC107655740,LOC107733356 coding upstream 136 18780375 ~ 18809580 (-)
LOC122356218 vip,LOC107655780,LOC107585469,LOC107597641,LOC107679148 coding upstream 50029 18830268 ~ 18832948 (-)
LOC122356839 acoxl coding upstream 195592 18975831 ~ 19008866 (-)
LOC122357016 fbln7,LOC107679196,LOC107754577,LOC107585467,LOC107733340,LOC107688955,LOC107597673 coding upstream 441817 19222056 ~ 19244847 (-)
zmp:0000001138 LOC107733342,LOC107679128,LOC107754581,LOC107597635,LOC107585445 coding upstream 465365 19245604 ~ 19247578 (-)
G94849 NA non-coding downstream 150356 18623483 ~ 18627312 (-)
G94845 NA non-coding downstream 233684 18543652 ~ 18543984 (-)
G94843 NA non-coding downstream 236968 18540385 ~ 18540700 (-)
LOC122356994 NA non-coding downstream 321542 18452872 ~ 18456126 (-)
G94826 marcksl1a,LOC107597644,LOC107724621,LOC107679202,LOC107734268,LOC107655702,LOC107585455 non-coding downstream 406317 18218993 ~ 18371351 (-)
G94941 NA non-coding upstream 136006 18916245 ~ 18916650 (-)
G94961 NA non-coding upstream 298321 19078560 ~ 19078839 (-)
G94978 NA non-coding upstream 389629 19169868 ~ 19170089 (-)
G94997 mertk,LOC107724611 non-coding upstream 421604 19201843 ~ 19208269 (-)
G95068 NA non-coding upstream 645324 19425563 ~ 19427926 (-)
LOC122356088 ate1,LOC107679187,LOC107655512 other downstream 104775 18545571 ~ 18672893 (-)
LOC122356193 slc35f4,slc35f3,LOC107664436,LOC107586844,LOC107559881,LOC107668528,LOC107747268,LOC107665565,LOC107664233,LOC107736862 other downstream 1390662 17374750 ~ 17387006 (-)
G94412 opn3,LOC107549142,LOC107665579,LOC107586115,LOC107747290,LOC107719228,LOC107676370 other downstream 2351133 16425697 ~ 16426535 (-)
cisd1 cisd1,LOC107549159,LOC107747252,LOC107665600,LOC105902329,LOC108443718 other downstream 2485289 16290154 ~ 16292379 (-)
pcdh15a pcdh15a,LOC108443650,LOC107586072 other downstream 2608464 16009687 ~ 16169204 (-)
LOC122357020 LOC107724613,LOC107679163,LOC107733343,LOC107585413,LOC107597639 other upstream 177464 18957703 ~ 18975524 (-)
itga9 itga9,LOC107688464,LOC107679186,LOC107585444 other upstream 505791 19286030 ~ 19362041 (-)
disc1 LOC107666898,LOC107730373 other upstream 1082291 19862530 ~ 19907062 (-)
LOC122357123 tsnax,LOC107557734,LOC107690806,LOC107564242,LOC107667162 other upstream 1128956 19909195 ~ 19921669 (-)
LOC122356211 gng4 other upstream 1484487 20264726 ~ 20275386 (-)

Expression


Co-expression Network