slc29a1a (slc29a1a,LOC107655740,LOC107733356)


Basic Information

Item Value
gene id slc29a1a
gene name slc29a1a,LOC107655740,LOC107733356
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056711.1
NCBI id CM032080.1
chromosome length 25085836
location 18780375 ~ 18809580 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043255933.1
ctctctctctctcacacacacacacacacacacacacacacactcactgtctGGTGTCTTTGTGTTGAGCTCACAGTCTGAATTCTCTCCTCTCTTCACATGAAGATTTGATGCCAGATTCTGAAACAAATCAGTGACCGATCCTCCAGACAGACACCATGACGGCCGCCAACGCTCCACGGGACCGGTATAATGCCGTATGGATCATATTCTTCATTCTGGGCCTGGGAACTTTGCTACCGTGGAATTTCTTCATGACCGCTACCATGTACTTCACCAGCCGTCTGAAGGACCCACAGACGAGCGGAGAACACAATCTGACAAGCAATGTGACGGTGGTGACGGGCGATCGTAACGTCCTGGAGTCAAAGTTCAACAACGTGATGACGCTGTGTGCCATGGTGCCGCTGCTGATTTTCACCTGCCTCAACTCCTTCATCCACCAGAGGATTCCTCAGAAGCTGAGGATCTCGGGCAGCCTGTCTGTCATTTTCGTGGTGTTCCTCATCACGGCCGTGCTGGTGAAGGTGGAGATGGAGCCCCTGCCGTTCTTCACCTTGACCATGATCAAAATCATCTGCATCAACTCGTTCGGGGCCATTCTGCAAGGGAGTCTGTTTGGTTTGGCTGGAATGCTCCCAGCGTCCTACACCACACCCATCATGAGCGGACAAGGCCTGGCAGGGACCTTCGCAGCCTTCTCCATGATCTGTGCCCTCGCCTCGGGCTCTGAGCTGCAGGACAGTGCCTTCGGTTACTTCATCACTGCCTGTGTGGTTATTCTCCTGGCCATCGTTTCCTACCTCGCTCTGCCTAAAATGGAGTTTTTCCAGTATTACTCCGAGAGCAATGGCTCCCGATCCAGCACCGATGAGGAAAACAAGATGGATTTGCTGAAACCAGAAGGTGAAGCGGAGAAGAGGCCCGTCCTGAGCCTGACCGATGAAGCCAGCAGGCCCGCCGTGTCGGTGTTCGGCATCTTCAAACAGATCTGGGTGATGGCTCTCTCCGTGTGCTTCGTTTTCACCATCACCATCGGCGTATTCCCGGCCGTCACCGTCGACGTCAAGACCACCGTCGTTGAAGGAGGCAGCAGTTGGAATATTTATTTCATCCCGGTGTCCTGCTTCCTCCTGTTCAATGTGATGGACTGGGCCGGCAGGAGCCTGACAGCTGTTTGCATGTGGCCCGGTAAAAACAGCATCTGGCTGCCCATCCTGGTCGTGGCACGCTTGGTGTTTGTTCCTCTCTTCATGTTCTGTAACGTTCAGCCCAGAAGCCTGCCCGTGGCGTTCGCTCACGACGCCTGGTACATCGTCTTCATGATCCTCTTCTCCTTCAGCAACGGATACCTGGCCAGCCTCTGCATGTGCTTCGGACCAAAGAAAGTGTCCCAACACGAAGCGGAAACCGCAGGGGCCATCATGgccttcttcctctctctcggCTTGGCTGTGGGAGCCGCGTTATCCTTCGCTTTCCGGGCCATGATCTAGAACCGTGGCCTAGTTCTCAGtatgatgaagaggaggaacTTTAACCCCAGATATACACAGAGCCAGAATGTTTTCACACTGCACATGTATCCACTTGCCTGTCTGTCCCTCTCGTTCGGTTCACTTCTAAAAGACGTGGAGCTGGAATAGACAGTTATTCACACAGGGATTCGAAGAGGGATCATCTTCATCGACATCAAGATGagcatcatcatcttcatcaggCAAAAAAACGAGCCaaatctgaatgcattttttttttgtatacctTTTGTACCAATTCAGTATTTAGCAATAATGTATAGTTAACCCCTTtatgttttagttgtttttaatgtttgttttcttgtagATATTAACAGTTTTAGTGGTTTTAGTGATGGCAGCACGCAGCTATTAGGGCGGTagttcactgcaaaaaaataagttctcgttttttttctttgcaaatgcCTAAAAATTCAAACCTGTTTTCTGAAAATTAgtttaaagcacaaaaataatttggttTTCCCATTGAATGGTTTATTTTTCTTGCATTACCGAGAcattttcacttgttttaaGCACACGCTTAACTAATTGTAACACCGTACGTCATTTTTCGTAAGTAAATGTCTGTATTTGAGAacgtttagatatttgtactgAAAACCGAACTAGTTTTTGCAGTGGTTCTAGCTAAATTGTACTGTATCACATCATCAAAGGGCCCCGATTTGTGTTTATAGTGGCATTTTGAATCGTGAGATCCGTTCAGATGtctgctgtttattttgtcggctgcatgcattttgatttgaactTGCTTTCAAATACTGGCCTCAGTACATTTTGTCAGCAATGAagtttctcattttaaatgaaggcctaaaagtgttacatttgaccgtattatttatgttaattttataaccgcttttttgtttttattattattataatttttaaatgcagcatgTATGACGACGCCTTCTAACATCGCGCAAATGCACAACTTGCTTTGGTGCCTCtttaaatgagatgttttccaaaaaaaattggCCAAATTGAGATGTGCGTCTGTGGACGGGTGGGACTGTGAACGGAAGGGGAtggaaataaacacatttctgtTTGTAA
>XM_043255934.1
ATCTGCAGTGAATGCGACACCGAAGGCATCTTCACTATGCCAGTACAGATGAAATTAGAGCCATAACGCCACACAGACACCCACGACTTCGGATTTGATGCCAGATTCTGAAACAAATCAGTGACCGATCCTCCAGACAGACACCATGACGGCCGCCAACGCTCCACGGGACCGGTATAATGCCGTATGGATCATATTCTTCATTCTGGGCCTGGGAACTTTGCTACCGTGGAATTTCTTCATGACCGCTACCATGTACTTCACCAGCCGTCTGAAGGACCCACAGACGAGCGGAGAACACAATCTGACAAGCAATGTGACGGTGGTGACGGGCGATCGTAACGTCCTGGAGTCAAAGTTCAACAACGTGATGACGCTGTGTGCCATGGTGCCGCTGCTGATTTTCACCTGCCTCAACTCCTTCATCCACCAGAGGATTCCTCAGAAGCTGAGGATCTCGGGCAGCCTGTCTGTCATTTTCGTGGTGTTCCTCATCACGGCCGTGCTGGTGAAGGTGGAGATGGAGCCCCTGCCGTTCTTCACCTTGACCATGATCAAAATCATCTGCATCAACTCGTTCGGGGCCATTCTGCAAGGGAGTCTGTTTGGTTTGGCTGGAATGCTCCCAGCGTCCTACACCACACCCATCATGAGCGGACAAGGCCTGGCAGGGACCTTCGCAGCCTTCTCCATGATCTGTGCCCTCGCCTCGGGCTCTGAGCTGCAGGACAGTGCCTTCGGTTACTTCATCACTGCCTGTGTGGTTATTCTCCTGGCCATCGTTTCCTACCTCGCTCTGCCTAAAATGGAGTTTTTCCAGTATTACTCCGAGAGCAATGGCTCCCGATCCAGCACCGATGAGGAAAACAAGATGGATTTGCTGAAACCAGAAGGTGAAGCGGAGAAGAGGCCCGTCCTGAGCCTGACCGATGAAGCCAGCAGGCCCGCCGTGTCGGTGTTCGGCATCTTCAAACAGATCTGGGTGATGGCTCTCTCCGTGTGCTTCGTTTTCACCATCACCATCGGCGTATTCCCGGCCGTCACCGTCGACGTCAAGACCACCGTCGTTGAAGGAGGCAGCAGTTGGAATATTTATTTCATCCCGGTGTCCTGCTTCCTCCTGTTCAATGTGATGGACTGGGCCGGCAGGAGCCTGACAGCTGTTTGCATGTGGCCCGGTAAAAACAGCATCTGGCTGCCCATCCTGGTCGTGGCACGCTTGGTGTTTGTTCCTCTCTTCATGTTCTGTAACGTTCAGCCCAGAAGCCTGCCCGTGGCGTTCGCTCACGACGCCTGGTACATCGTCTTCATGATCCTCTTCTCCTTCAGCAACGGATACCTGGCCAGCCTCTGCATGTGCTTCGGACCAAAGAAAGTGTCCCAACACGAAGCGGAAACCGCAGGGGCCATCATGgccttcttcctctctctcggCTTGGCTGTGGGAGCCGCGTTATCCTTCGCTTTCCGGGCCATGATCTAGAACCGTGGCCTAGTTCTCAGtatgatgaagaggaggaacTTTAACCCCAGATATACACAGAGCCAGAATGTTTTCACACTGCACATGTATCCACTTGCCTGTCTGTCCCTCTCGTTCGGTTCACTTCTAAAAGACGTGGAGCTGGAATAGACAGTTATTCACACAGGGATTCGAAGAGGGATCATCTTCATCGACATCAAGATGagcatcatcatcttcatcaggCAAAAAAACGAGCCaaatctgaatgcattttttttttgtatacctTTTGTACCAATTCAGTATTTAGCAATAATGTATAGTTAACCCCTTtatgttttagttgtttttaatgtttgttttcttgtagATATTAACAGTTTTAGTGGTTTTAGTGATGGCAGCACGCAGCTATTAGGGCGGTagttcactgcaaaaaaataagttctcgttttttttctttgcaaatgcCTAAAAATTCAAACCTGTTTTCTGAAAATTAgtttaaagcacaaaaataatttggttTTCCCATTGAATGGTTTATTTTTCTTGCATTACCGAGAcattttcacttgttttaaGCACACGCTTAACTAATTGTAACACCGTACGTCATTTTTCGTAAGTAAATGTCTGTATTTGAGAacgtttagatatttgtactgAAAACCGAACTAGTTTTTGCAGTGGTTCTAGCTAAATTGTACTGTATCACATCATCAAAGGGCCCCGATTTGTGTTTATAGTGGCATTTTGAATCGTGAGATCCGTTCAGATGtctgctgtttattttgtcggctgcatgcattttgatttgaactTGCTTTCAAATACTGGCCTCAGTACATTTTGTCAGCAATGAagtttctcattttaaatgaaggcctaaaagtgttacatttgaccgtattatttatgttaattttataaccgcttttttgtttttattattattataatttttaaatgcagcatgTATGACGACGCCTTCTAACATCGCGCAAATGCACAACTTGCTTTGGTGCCTCtttaaatgagatgttttccaaaaaaaattggCCAAATTGAGATGTGCGTCTGTGGACGGGTGGGACTGTGAACGGAAGGGGAtggaaataaacacatttctgtTTGTAA
>XM_043255935.1
AGCGCCGGCCGTTAAACCGGCCGAAATCTACCGACAGAGAGCCATTCATTCAGAGGAATTTAGAGCAACTTCACGCCGCGCGAATCACATTCACCATGAAGGAGTCCAGAGCCGCGACCGCCGTGAAAGACTCTCGCAGAAAACACCCCGCAAACTGACATGCAGGACGAGCAGGGGAAAACGCCAAAAAACCCCGGTCAAGTTCGTGAATATTTGATGCCAGATTCTGAAACAAATCAGTGACCGATCCTCCAGACAGACACCATGACGGCCGCCAACGCTCCACGGGACCGGTATAATGCCGTATGGATCATATTCTTCATTCTGGGCCTGGGAACTTTGCTACCGTGGAATTTCTTCATGACCGCTACCATGTACTTCACCAGCCGTCTGAAGGACCCACAGACGAGCGGAGAACACAATCTGACAAGCAATGTGACGGTGGTGACGGGCGATCGTAACGTCCTGGAGTCAAAGTTCAACAACGTGATGACGCTGTGTGCCATGGTGCCGCTGCTGATTTTCACCTGCCTCAACTCCTTCATCCACCAGAGGATTCCTCAGAAGCTGAGGATCTCGGGCAGCCTGTCTGTCATTTTCGTGGTGTTCCTCATCACGGCCGTGCTGGTGAAGGTGGAGATGGAGCCCCTGCCGTTCTTCACCTTGACCATGATCAAAATCATCTGCATCAACTCGTTCGGGGCCATTCTGCAAGGGAGTCTGTTTGGTTTGGCTGGAATGCTCCCAGCGTCCTACACCACACCCATCATGAGCGGACAAGGCCTGGCAGGGACCTTCGCAGCCTTCTCCATGATCTGTGCCCTCGCCTCGGGCTCTGAGCTGCAGGACAGTGCCTTCGGTTACTTCATCACTGCCTGTGTGGTTATTCTCCTGGCCATCGTTTCCTACCTCGCTCTGCCTAAAATGGAGTTTTTCCAGTATTACTCCGAGAGCAATGGCTCCCGATCCAGCACCGATGAGGAAAACAAGATGGATTTGCTGAAACCAGAAGGTGAAGCGGAGAAGAGGCCCGTCCTGAGCCTGACCGATGAAGCCAGCAGGCCCGCCGTGTCGGTGTTCGGCATCTTCAAACAGATCTGGGTGATGGCTCTCTCCGTGTGCTTCGTTTTCACCATCACCATCGGCGTATTCCCGGCCGTCACCGTCGACGTCAAGACCACCGTCGTTGAAGGAGGCAGCAGTTGGAATATTTATTTCATCCCGGTGTCCTGCTTCCTCCTGTTCAATGTGATGGACTGGGCCGGCAGGAGCCTGACAGCTGTTTGCATGTGGCCCGGTAAAAACAGCATCTGGCTGCCCATCCTGGTCGTGGCACGCTTGGTGTTTGTTCCTCTCTTCATGTTCTGTAACGTTCAGCCCAGAAGCCTGCCCGTGGCGTTCGCTCACGACGCCTGGTACATCGTCTTCATGATCCTCTTCTCCTTCAGCAACGGATACCTGGCCAGCCTCTGCATGTGCTTCGGACCAAAGAAAGTGTCCCAACACGAAGCGGAAACCGCAGGGGCCATCATGgccttcttcctctctctcggCTTGGCTGTGGGAGCCGCGTTATCCTTCGCTTTCCGGGCCATGATCTAGAACCGTGGCCTAGTTCTCAGtatgatgaagaggaggaacTTTAACCCCAGATATACACAGAGCCAGAATGTTTTCACACTGCACATGTATCCACTTGCCTGTCTGTCCCTCTCGTTCGGTTCACTTCTAAAAGACGTGGAGCTGGAATAGACAGTTATTCACACAGGGATTCGAAGAGGGATCATCTTCATCGACATCAAGATGagcatcatcatcttcatcaggCAAAAAAACGAGCCaaatctgaatgcattttttttttgtatacctTTTGTACCAATTCAGTATTTAGCAATAATGTATAGTTAACCCCTTtatgttttagttgtttttaatgtttgttttcttgtagATATTAACAGTTTTAGTGGTTTTAGTGATGGCAGCACGCAGCTATTAGGGCGGTagttcactgcaaaaaaataagttctcgttttttttctttgcaaatgcCTAAAAATTCAAACCTGTTTTCTGAAAATTAgtttaaagcacaaaaataatttggttTTCCCATTGAATGGTTTATTTTTCTTGCATTACCGAGAcattttcacttgttttaaGCACACGCTTAACTAATTGTAACACCGTACGTCATTTTTCGTAAGTAAATGTCTGTATTTGAGAacgtttagatatttgtactgAAAACCGAACTAGTTTTTGCAGTGGTTCTAGCTAAATTGTACTGTATCACATCATCAAAGGGCCCCGATTTGTGTTTATAGTGGCATTTTGAATCGTGAGATCCGTTCAGATGtctgctgtttattttgtcggctgcatgcattttgatttgaactTGCTTTCAAATACTGGCCTCAGTACATTTTGTCAGCAATGAagtttctcattttaaatgaaggcctaaaagtgttacatttgaccgtattatttatgttaattttataaccgcttttttgtttttattattattataatttttaaatgcagcatgTATGACGACGCCTTCTAACATCGCGCAAATGCACAACTTGCTTTGGTGCCTCtttaaatgagatgttttccaaaaaaaattggCCAAATTGAGATGTGCGTCTGTGGACGGGTGGGACTGTGAACGGAAGGGGAtggaaataaacacatttctgtTTGTAA

Function

symbol description
slc29a1a Predicted to enable nucleoside transmembrane transporter activity. Predicted to be involved in uridine transport. Predicted to act upstream of or within nucleoside transmembrane transport. Predicted to be located in membrane. Predicted to be integral component of plasma membrane. Predicted to be active in plasma membrane. Predicted to be integral component of membrane. Is expressed in several structures, including central nervous system; eye; immature eye; neural plate; and pectoral fin. Orthologous to human SLC29A1 (solute carrier family 29 member 1 (Augustine blood group)).

NR:

description
equilibrative nucleoside transporter 1-like

GO:

id name namespace
GO:0006810 transport biological_process
GO:0016021 integral component of membrane cellular_component
GO:0005337 nucleoside transmembrane transporter activity molecular_function

KEGG:

id description
K15014 SLC29A1_2_3, ENT1_2_3; solute carrier family 29 (equilibrative nucleoside transporter), member 1/2/3

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043255933.1 False 2618 mRNA 0.47 13 18780375 18797660
XM_043255934.1 False 2605 mRNA 0.47 13 18780375 18803545
XM_043255935.1 True 2724 mRNA 0.47 13 18780375 18809580

Neighbor

gene id symbol gene type direction distance location
LOC122356860 NA coding downstream 136 18777668 ~ 18780239 (-)
LOC122356886 ate1,LOC107724575,LOC107679187,LOC107655512,LOC107597680 coding downstream 36833 18706349 ~ 18743542 (-)
LOC122356087 ate1,LOC107655512 coding downstream 195259 18574784 ~ 18585116 (-)
fgfr2 fgfr2,LOC107724577 coding downstream 276098 18458198 ~ 18504277 (-)
ftr69 LOC107597643,LOC107679211 coding downstream 396665 18380035 ~ 18383710 (-)
LOC122356218 vip,LOC107655780,LOC107585469,LOC107597641,LOC107679148 coding upstream 20688 18830268 ~ 18832948 (-)
LOC122356839 acoxl coding upstream 166251 18975831 ~ 19008866 (-)
LOC122357016 fbln7,LOC107679196,LOC107754577,LOC107585467,LOC107733340,LOC107688955,LOC107597673 coding upstream 412476 19222056 ~ 19244847 (-)
zmp:0000001138 LOC107733342,LOC107679128,LOC107754581,LOC107597635,LOC107585445 coding upstream 436024 19245604 ~ 19247578 (-)
LOC122357009 NA coding upstream 448806 19258386 ~ 19266509 (-)
G94849 NA non-coding downstream 153063 18623483 ~ 18627312 (-)
G94845 NA non-coding downstream 236391 18543652 ~ 18543984 (-)
G94843 NA non-coding downstream 239675 18540385 ~ 18540700 (-)
LOC122356994 NA non-coding downstream 324249 18452872 ~ 18456126 (-)
G94826 marcksl1a,LOC107597644,LOC107724621,LOC107679202,LOC107734268,LOC107655702,LOC107585455 non-coding downstream 409024 18218993 ~ 18371351 (-)
G94941 NA non-coding upstream 106665 18916245 ~ 18916650 (-)
G94961 NA non-coding upstream 268980 19078560 ~ 19078839 (-)
G94978 NA non-coding upstream 360288 19169868 ~ 19170089 (-)
G94997 mertk,LOC107724611 non-coding upstream 392263 19201843 ~ 19208269 (-)
G95068 NA non-coding upstream 615983 19425563 ~ 19427926 (-)
LOC122356088 ate1,LOC107679187,LOC107655512 other downstream 107482 18545571 ~ 18672893 (-)
LOC122356193 slc35f4,slc35f3,LOC107664436,LOC107586844,LOC107559881,LOC107668528,LOC107747268,LOC107665565,LOC107664233,LOC107736862 other downstream 1393369 17374750 ~ 17387006 (-)
G94412 opn3,LOC107549142,LOC107665579,LOC107586115,LOC107747290,LOC107719228,LOC107676370 other downstream 2353840 16425697 ~ 16426535 (-)
cisd1 cisd1,LOC107549159,LOC107747252,LOC107665600,LOC105902329,LOC108443718 other downstream 2487996 16290154 ~ 16292379 (-)
pcdh15a pcdh15a,LOC108443650,LOC107586072 other downstream 2611171 16009687 ~ 16169204 (-)
LOC122357020 LOC107724613,LOC107679163,LOC107733343,LOC107585413,LOC107597639 other upstream 148123 18957703 ~ 18975524 (-)
itga9 itga9,LOC107688464,LOC107679186,LOC107585444 other upstream 476450 19286030 ~ 19362041 (-)
disc1 LOC107666898,LOC107730373 other upstream 1052950 19862530 ~ 19907062 (-)
LOC122357123 tsnax,LOC107557734,LOC107690806,LOC107564242,LOC107667162 other upstream 1099615 19909195 ~ 19921669 (-)
LOC122356211 gng4 other upstream 1455146 20264726 ~ 20275386 (-)

Expression


Co-expression Network