LOC122356942 (LOC107689348,LOC107663569,LOC107750139,LOC108426858,LOC562831,LOC108262825,LOC107567011,LOC105926138)


Basic Information

Item Value
gene id LOC122356942
gene name LOC107689348,LOC107663569,LOC107750139,LOC108426858,LOC562831,LOC108262825,LOC107567011,LOC105926138
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056711.1
NCBI id CM032080.1
chromosome length 25085836
location 21269350 ~ 21323003 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043256060.1
TCTCCGGCTCGGAGCGCGCGCGCGGGCGCGCGGGGGGGTAATTCAGTCGCTCTCGCGCGCTGCCGCAAGGACGCTGGCTCCGCGCGCTCGCCTCGAAACCGGAGTAAAACGCAGCTTTTATCCACTTTTGTCGGATGTTGAGCGAAGGTCAATGTCTCCGTGGACTCGGTCGGACAGCTCGCCCTGATATTTCTGAGAAATGCCCGTTTCTACGCGGCGCCACAGATAGACTCCAGCGGACCGAAGCTCTCCTCATCTCACCATGACCTTCTTCAGCTCTTTATTTGCCCTCCTCTTCATCAGCAGGTTTCTGGAGAACTCTCTGCTCAGCGCCGAGGTGAAAGAGGGAGAGATTCTTCCTCCGACCATCCAGAAGCTGATGAAAGGATACAACAAATACCTGCGGCCTTTCTTTGACAATGGTCCCGTCACGGTGGGCATGAGTTTAGACATCGCCAGCATCGATACCATATCAGAGATCAACATGGACTACACCGCCACCATCTTCCTCCGGCAGCGCTGGACGGACGAGCGGCTGGTGTTTGAAGGGAATAAGAGTTTAAGTCTGGACGGCCGTCTGGTGGAGCTGCTGTGGGTCCCGGACACCTTCATAGTGGACTCCAAGAAGTCCTTCCTCCACGACATCACAGTGGAGAACCGACTGATCCGGATCTTTCCCAACGGAACCGTTCTCTACGCGCTCCGGATCACCACGACTGTGGCCTGTAACATGGACCTGACCAAATATCCCATGGACAAACAGACGTGCACCCTGCAGCTGGAGAGCTgggGTTATAACGTCAATGACGTGATGTTTTACTGGGCGCGTGGGAACGACTCTGTGAGCGGTCTGGACACGCTGAGACTGGCTCAGTACACCATCGAGGATCATTACACCTCCGAATCTGAGGCCGTATACGAGACGGGAAATTATCCCAAGCTGATCTTTCATTTCGAGCTGAAGAGGAGCATCTTGTACTTCATCCTGGAGACGTACGTGCCGTCCAGTCTGCTGGTGGTTCTGTCCTGGGTCTCTTTCTGGATCAGCCAGTCATCCGTCCCCGCTCGCATCTGCATAGGTGTGACGACAGTCCTGACGATGACCACACTGATGATGGGTGCCCGGACGTCCCTGCCCAATGCCAACTGCTTCATCAAGGCCATCGACGTGTACCTGGGCATCTGCTTCAGCTTCATCTTTGGAGCGCTGATAGAGTACGCCGTAGCCCATTTCTGCACACTGCACCACCCCGACTGCAACAACGCACTCATGTACGGTCATCACATGCATGAGTGTGAGGAGGAGATGAACGGCATCGTCACCACCATCGCCAGCAATTCTTCACGGCTAAAGCGGCGCAAAGACTCTCCGGCTCCGGCACCCACGCCCGCCGCCGGCGGAGAGCCTGGCCTCGCGCCCTCCAGCCCGACCACCAGCGAACCCAAGACTGCAGAGGCCCCAGCGGAGCTCCTTAGCCGCTGTGCCAAAAACATCTCCATCCTGAGGAAGATCCTGAAATCCATTAACTGCTGTCATGTGGAAAACCCACATTATATAGACAACTACTCACGGTTAACCTTCCCGCTGTCGTTCATCCTCGTTAATCTGCTCTACTGGACCTACTACCTGTACTTTTAAGTAACATATCATGCTGAATCCTTTCTGTGTGTTAGTAagtaagatgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtttaaaagacCAGTAGAGAGTTACGGTTGCCCCAATATTAAATTTCTCAGCCAATACCAGTACCCGGTTATGGAGAATGATGTTGGCCAATAACGATGGCTGATTATTCCGAATGATATCTGTCGATACAAGTAATGATTATTCAATATACCAAATGCCGAAAACGGCTGCTAATTATTTCAGAATGATATATGCCGATACCGATATCAGATTTTTCAGAATATCTGCCGATACCAGCAGTGGTTTTTCTGAACAAACAATGCTAATATCAATCACCAATTATTCAGAATTATATGTGCTAATacaattattcataatatttgtcAATACCGATAACTGATTATTCAAAGTGGTATCTTCCAATATTGCTAATCGATTATTCAGAGTTACATCAGCCAATAGAATTATTCTGAATGATATCTTCCGATAGCAGATTATTCACAATGATATCTAGCTATCCGATTATTCAGAATATTATCTGCTGACACAGATACCGGTACTGCTAACCGATTATTCAGAATGATGTCTGCTGATACCGagaaaaatcagatttttcagAATATCTGCCGATACCAGCAGTGGTTTTTCTGAACAAACAATGCTAATATCAATCACCAATTATTCAGAATTATATGTGCTAATacaattattcataatatttgtcAATACCGATAACTGATTATTCAAAGTGGTATCTTCCAATATTGCTAATCGATTATTCAGAGTTACATCAGCCAATAGAATTATTCTGAATGATATCTTCCGATAGCGATAGCAGATTATTCACAATGATATCCACCTATCCGATTATTCAGAATATTATCTGCCGACACAGATATCGGTACTGCTAACCGATTATTCAGAATGATATCTGCCGATACTATAGATTACTGGAAATCTGAGTTTGGTTTCACTTATGGCTAAGGAGGACGAACAGACTAAATCTTCTAGATTAATAGCCAACAGCCAAGTTAATATAAACCAGTAGTCAAGTAGTCATTGTTTTAGACTGTTGTTGTGAGTAATGCAGCCTTTTTGAAATATTGGCCATGATGAAGTTGTTAAATGCTGGTAAATGGTAATGTAATTGACGTTACAGCAATAATAGCAAATAATGACGGATTACTGGGACTTTGCTGACATCCCCCAAATCACTGTAGGTTTTatcacaagaggaaaaaaatgggataattttagtatttgaaagtgtgtgaatgtgattGTTAGAAACGGTCATCTTAatctgcatttgtgtgtgtgtgtgtgtgtgtgtgtgtgtgcgtgtgttcatCATCATTGGCTGGACGTCACTGAAACAGTacaatgcagtaaaatattCTCAAAAAGTCCTAACAAGTCGACATCCTAAAGGCGTAGTTCGTTCAAAAGGGGAAACCATGTTGTTTACTCGCCCTCACGTCCACTAAAAAACCTCTATGACTGTTTGAATCTCACTTCCGTTTGCAGTCAATTCAAATATGACAGCAGTTCTTTACACAACCCGCCTCATCCTTGAGGTTAGATAATATTATCGACAACATTGAGTAAAGTGTGCTAATGTTTTACAAagctacaaacaaaaaaattgctatTACTTTGCTATTAGAGCCGATATAATAGCGTTGAAGTTCTTTTACGTTTTTCGGGTACAATGAAATTTGAGGTTACACttgatttttatattctttttatagTCCTAGAcgttctactaactataagcgactttgtaactacatgtcaactaattttcattaatttgcaattacACGTCTGCTAACTTAGGTTTAAGTTGACATGTACCCAAAAAGTTTGGACCCGGCAAAATAAAGCGTTACGGTATTAGGCAGACcgtctactaatactctgcTAGTTGACGTCTAGTTGGAAAATGGCTTGCTGTTAGTagaatttctaaataaaaagcgGTAGTTTACTGTTATCTTAGGTGAATGTGTAAATACGGTGTAATGCTGCACGTTTCCTTTCAATAATAAAGACGGCAACGGCAAAAATGGAGAAAACAGAAGTTCATCCTGTAGTGCACGTCTactgtttatttagtttgtcaTTCTAATAATCCTTCGGTAAATCGAATATCAAAATAACCGTCTACTGTAGCCCTAGTTGACCTTTAATCCGGTGCAATTAGTCATATTTGAATTATGCACAGGAGCGAATGAGATTCGAGAGCTGCTGGACACCTGAGGGTCAGTAAATAGtgatttttaggtgaactatccctttaagctcAGTCTCTTTTAGTCCATCACGGTGCGTTTTCGTTCgctgtgtctgtgttttccaCACCGTAATGCCTCGAATGCGTCTTCCTCGCGTATCTGTGCTTCTCGAGTTCGAGTTGCAGGGCAGACAGAAGCCATCTCTCCCCGTTTACTGCTTCCATAAATCCTCTGGCCTTGGCCGCTTCTCTTGCACACCACAGGATCGATGGCCGTGTAAACTCTTCATGCGGCGTGGCTTTGAAGATTCAGAGGTGTTTGCGGACTCCGGACCGATCCACTGAACTTCTTGGAGACGTGCATCTGCGCTCCGAAGCTCTCGTCGCGAACCGGACCGAACGCTTTGGGTTAGGATTTTAACTGATGTGTTTTCTGAAGCTTTGTTTAAGACAGGCATCACTTTTCTAAGATGCGAGCGctcattgtttatttgaatggaTGGGTTTTTCTTTCTGGATCACGTAacggttttttttcccctttgggATTGTTGATGCTCTTAAATGGATCGGctatttttgtaacttttaattGGCTTAATTGAGATGTTTTGAGCGTTTGCCGTCGGCATGCAGTCGGATCCTTAATTTCACGTCGAATGCCTTCCGTTGAAAAGTTGAAACTACGAAGTGCTTGattttcaatttaatgcatgtttagggtaatatttattcagtgtaataatacattaatatggacatgtaaattaatattcacTGGACTACTTTGTGTTGTTTATAATTTGCTACGTTTAGATTTAATGCAATAACTTTGTCATTTACTATATATGCATATCAGGCTTATTGtctttaactaaaactaaaaccattaaaaaaaagtacttaaaatg
>XM_043256061.1
CCTCTCCGGCTCGGAGCGCGCGCGCGGGCGCGCGGGGGGGTAATTCAGTCGCTCTCGCGCGCTGCCGCAAGGACGCTGGCTCCGCGCGCTCGCCTCGAAACCGGAGTAAAACGCAGCTTTTATCCACTTTTGTCGGATGTTGAGCGAAGGTCAATGTCTCCGTGGACTCGGTCGGACAGCTCGCCCTGATATTTCTGAGAAATGCCCGTTTCTACGCGGCGCCACAGACTCCAGCGGACCGAAGCTCTCCTCATCTCACCATGACCTTCTTCAGCTCTTTATTTGCCCTCCTCTTCATCAGCAGGTTTCTGGAGAACTCTCTGCTCAGCGCCGAGGTGAAAGAGGGAGAGATTCTTCCTCCGACCATCCAGAAGCTGATGAAAGGATACAACAAATACCTGCGGCCTTTCTTTGACAATGGTCCCGTCACGGTGGGCATGAGTTTAGACATCGCCAGCATCGATACCATATCAGAGATCAACATGGACTACACCGCCACCATCTTCCTCCGGCAGCGCTGGACGGACGAGCGGCTGGTGTTTGAAGGGAATAAGAGTTTAAGTCTGGACGGCCGTCTGGTGGAGCTGCTGTGGGTCCCGGACACCTTCATAGTGGACTCCAAGAAGTCCTTCCTCCACGACATCACAGTGGAGAACCGACTGATCCGGATCTTTCCCAACGGAACCGTTCTCTACGCGCTCCGGATCACCACGACTGTGGCCTGTAACATGGACCTGACCAAATATCCCATGGACAAACAGACGTGCACCCTGCAGCTGGAGAGCTgggGTTATAACGTCAATGACGTGATGTTTTACTGGGCGCGTGGGAACGACTCTGTGAGCGGTCTGGACACGCTGAGACTGGCTCAGTACACCATCGAGGATCATTACACCTCCGAATCTGAGGCCGTATACGAGACGGGAAATTATCCCAAGCTGATCTTTCATTTCGAGCTGAAGAGGAGCATCTTGTACTTCATCCTGGAGACGTACGTGCCGTCCAGTCTGCTGGTGGTTCTGTCCTGGGTCTCTTTCTGGATCAGCCAGTCATCCGTCCCCGCTCGCATCTGCATAGGTGTGACGACAGTCCTGACGATGACCACACTGATGATGGGTGCCCGGACGTCCCTGCCCAATGCCAACTGCTTCATCAAGGCCATCGACGTGTACCTGGGCATCTGCTTCAGCTTCATCTTTGGAGCGCTGATAGAGTACGCCGTAGCCCATTTCTGCACACTGCACCACCCCGACTGCAACAACGCACTCATGTACGGTCATCACATGCATGAGTGTGAGGAGGAGATGAACGGCATCGTCACCACCATCGCCAGCAATTCTTCACGGCTAAAGCGGCGCAAAGACTCTCCGGCTCCGGCACCCACGCCCGCCGCCGGCGGAGAGCCTGGCCTCGCGCCCTCCAGCCCGACCACCAGCGAACCCAAGACTGCAGAGGCCCCAGCGGAGCTCCTTAGCCGCTGTGCCAAAAACATCTCCATCCTGAGGAAGATCCTGAAATCCATTAACTGCTGTCATGTGGAAAACCCACATTATATAGACAACTACTCACGGTTAACCTTCCCGCTGTCGTTCATCCTCGTTAATCTGCTCTACTGGACCTACTACCTGTACTTTTAAGTAACATATCATGCTGAATCCTTTCTGTGTGTTAGTAagtaagatgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtttaaaagacCAGTAGAGAGTTACGGTTGCCCCAATATTAAATTTCTCAGCCAATACCAGTACCCGGTTATGGAGAATGATGTTGGCCAATAACGATGGCTGATTATTCCGAATGATATCTGTCGATACAAGTAATGATTATTCAATATACCAAATGCCGAAAACGGCTGCTAATTATTTCAGAATGATATATGCCGATACCGATATCAGATTTTTCAGAATATCTGCCGATACCAGCAGTGGTTTTTCTGAACAAACAATGCTAATATCAATCACCAATTATTCAGAATTATATGTGCTAATacaattattcataatatttgtcAATACCGATAACTGATTATTCAAAGTGGTATCTTCCAATATTGCTAATCGATTATTCAGAGTTACATCAGCCAATAGAATTATTCTGAATGATATCTTCCGATAGCAGATTATTCACAATGATATCTAGCTATCCGATTATTCAGAATATTATCTGCTGACACAGATACCGGTACTGCTAACCGATTATTCAGAATGATGTCTGCTGATACCGagaaaaatcagatttttcagAATATCTGCCGATACCAGCAGTGGTTTTTCTGAACAAACAATGCTAATATCAATCACCAATTATTCAGAATTATATGTGCTAATacaattattcataatatttgtcAATACCGATAACTGATTATTCAAAGTGGTATCTTCCAATATTGCTAATCGATTATTCAGAGTTACATCAGCCAATAGAATTATTCTGAATGATATCTTCCGATAGCGATAGCAGATTATTCACAATGATATCCACCTATCCGATTATTCAGAATATTATCTGCCGACACAGATATCGGTACTGCTAACCGATTATTCAGAATGATATCTGCCGATACTATAGATTACTGGAAATCTGAGTTTGGTTTCACTTATGGCTAAGGAGGACGAACAGACTAAATCTTCTAGATTAATAGCCAACAGCCAAGTTAATATAAACCAGTAGTCAAGTAGTCATTGTTTTAGACTGTTGTTGTGAGTAATGCAGCCTTTTTGAAATATTGGCCATGATGAAGTTGTTAAATGCTGGTAAATGGTAATGTAATTGACGTTACAGCAATAATAGCAAATAATGACGGATTACTGGGACTTTGCTGACATCCCCCAAATCACTGTAGGTTTTatcacaagaggaaaaaaatgggataattttagtatttgaaagtgtgtgaatgtgattGTTAGAAACGGTCATCTTAatctgcatttgtgtgtgtgtgtgtgtgtgtgtgtgtgtgcgtgtgttcatCATCATTGGCTGGACGTCACTGAAACAGTacaatgcagtaaaatattCTCAAAAAGTCCTAACAAGTCGACATCCTAAAGGCGTAGTTCGTTCAAAAGGGGAAACCATGTTGTTTACTCGCCCTCACGTCCACTAAAAAACCTCTATGACTGTTTGAATCTCACTTCCGTTTGCAGTCAATTCAAATATGACAGCAGTTCTTTACACAACCCGCCTCATCCTTGAGGTTAGATAATATTATCGACAACATTGAGTAAAGTGTGCTAATGTTTTACAAagctacaaacaaaaaaattgctatTACTTTGCTATTAGAGCCGATATAATAGCGTTGAAGTTCTTTTACGTTTTTCGGGTACAATGAAATTTGAGGTTACACttgatttttatattctttttatagTCCTAGAcgttctactaactataagcgactttgtaactacatgtcaactaattttcattaatttgcaattacACGTCTGCTAACTTAGGTTTAAGTTGACATGTACCCAAAAAGTTTGGACCCGGCAAAATAAAGCGTTACGGTATTAGGCAGACcgtctactaatactctgcTAGTTGACGTCTAGTTGGAAAATGGCTTGCTGTTAGTagaatttctaaataaaaagcgGTAGTTTACTGTTATCTTAGGTGAATGTGTAAATACGGTGTAATGCTGCACGTTTCCTTTCAATAATAAAGACGGCAACGGCAAAAATGGAGAAAACAGAAGTTCATCCTGTAGTGCACGTCTactgtttatttagtttgtcaTTCTAATAATCCTTCGGTAAATCGAATATCAAAATAACCGTCTACTGTAGCCCTAGTTGACCTTTAATCCGGTGCAATTAGTCATATTTGAATTATGCACAGGAGCGAATGAGATTCGAGAGCTGCTGGACACCTGAGGGTCAGTAAATAGtgatttttaggtgaactatccctttaagctcAGTCTCTTTTAGTCCATCACGGTGCGTTTTCGTTCgctgtgtctgtgttttccaCACCGTAATGCCTCGAATGCGTCTTCCTCGCGTATCTGTGCTTCTCGAGTTCGAGTTGCAGGGCAGACAGAAGCCATCTCTCCCCGTTTACTGCTTCCATAAATCCTCTGGCCTTGGCCGCTTCTCTTGCACACCACAGGATCGATGGCCGTGTAAACTCTTCATGCGGCGTGGCTTTGAAGATTCAGAGGTGTTTGCGGACTCCGGACCGATCCACTGAACTTCTTGGAGACGTGCATCTGCGCTCCGAAGCTCTCGTCGCGAACCGGACCGAACGCTTTGGGTTAGGATTTTAACTGATGTGTTTTCTGAAGCTTTGTTTAAGACAGGCATCACTTTTCTAAGATGCGAGCGctcattgtttatttgaatggaTGGGTTTTTCTTTCTGGATCACGTAacggttttttttcccctttgggATTGTTGATGCTCTTAAATGGATCGGctatttttgtaacttttaattGGCTTAATTGAGATGTTTTGAGCGTTTGCCGTCGGCATGCAGTCGGATCCTTAATTTCACGTCGAATGCCTTCCGTTGAAAAGTTGAAACTACGAAGTGCTTGattttcaatttaatgcatgtttagggtaatatttattcagtgtaataatacattaatatggacatgtaaattaatattcacTGGACTACTTTGTGTTGTTTATAATTTGCTACGTTTAGATTTAATGCAATAACTTTGTCATTTACTATATATGCATATCAGGCTTATTGtctttaactaaaactaaaaccattaaaaaaaagtacttaaaatg

Function

NR:

description
PREDICTED: gamma-aminobutyric acid receptor subunit pi-like

GO: NA

KEGG:

id description
K05189 GABRP; gamma-aminobutyric acid receptor subunit pi

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043256060.1 True 4803 mRNA 0.44 10 21269350 21323001
XM_043256061.1 False 4801 mRNA 0.44 10 21269350 21323003

Neighbor

gene id symbol gene type direction distance location
LOC122356506 LOC107689349,LOC107663567,LOC107750141,LOC107720869,LOC107570923 coding downstream 14712 21209818 ~ 21254638 (-)
LOC122356507 LOC107708201,LOC107658777,LOC107554523 coding downstream 227196 21027765 ~ 21042154 (-)
LOC122356249 LOC107686530 coding downstream 271637 20955467 ~ 20997713 (-)
vox vox,LOC107750144,LOC107689360,LOC107580632 coding downstream 319652 20947987 ~ 20949698 (-)
vent NA coding downstream 322825 20944584 ~ 20946525 (-)
trnag-gcc_70 NA coding upstream 90797 21413800 ~ 21413871 (-)
trnag-gcc_71 NA coding upstream 251248 21574251 ~ 21574321 (-)
valopa valopa,LOC107689369,LOC107688178,LOC107754013,LOC107745034 coding upstream 524427 21847430 ~ 21866898 (-)
LOC122356328 inpp5a,LOC107744939 coding upstream 585355 21908358 ~ 22024610 (-)
pwwp2b pwwp2b,LOC107670800,LOC107754010,LOC107744923,LOC107653191 coding upstream 718452 22041455 ~ 22051686 (-)
G95643 NA non-coding downstream 265699 21002627 ~ 21003651 (-)
G95642 NA non-coding downstream 267506 21001337 ~ 21001844 (-)
G95641 NA non-coding downstream 270085 20999040 ~ 20999265 (-)
G95640 NA non-coding downstream 272839 20996083 ~ 20996511 (-)
G95635 NA non-coding downstream 292853 20976279 ~ 20976497 (-)
G95715 NA non-coding upstream 164511 21487514 ~ 21495153 (-)
trnag-gcc_72 NA non-coding upstream 330609 21653612 ~ 21653681 (-)
G95899 NA non-coding upstream 551510 21874513 ~ 21874929 (-)
G95903 NA non-coding upstream 716779 22039782 ~ 22040106 (-)
G95902 NA non-coding upstream 791693 22114696 ~ 22120442 (-)
G95646 adgra1,LOC107750141,LOC107567015,LOC107663568,LOC106903219,LOC107720869 other downstream 89133 21007472 ~ 21180217 (-)
G95526 NA other downstream 697788 20570038 ~ 20571562 (-)
G95511 NA other downstream 772486 20493642 ~ 20496864 (-)
G95510 nid1,nid1a,LOC107691203,LOC107750138,LOC107728305,LOC107689759 other downstream 777274 20488785 ~ 20492076 (-)
G95520 NA other downstream 782646 20479925 ~ 20486704 (-)
LOC122357128 NA other upstream 814385 22137388 ~ 22143970 (-)
tmem254 LOC107689576,LOC107653189,LOC107742085,LOC107711410 other upstream 828739 22151742 ~ 22156859 (-)
klc1b klc4,LOC107742075,LOC108263390,LOC106963894 other upstream 908446 22231449 ~ 22250313 (-)
G95932 NA other upstream 913101 22236104 ~ 22238570 (-)
G95936 lbh other upstream 973338 22296341 ~ 22297227 (-)

Expression


Co-expression Network