G6820


Basic Information

Item Value
gene id G6820
gene name NA
gene type unknown
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000000
NCBI id null
chromosome length 19091038
location 10427223 ~ 10433018 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU7538
TAAAAAGTTAAAACTTTCCTCATCACTTCTGTTCTTTTCTTCTTTAAATTCTCTTCATTTCTCTTACACACATCTCTAGTTTTTCATGCAATGGTCCCCAGTTTGTACACTCTGAACGCAAACTCATTAGTTCTTGAAGGATCCTCTCAAGTTTTTCTTGATGTTGCAAACAATTAACACAGCCTGATTCAGCTGGATGCACAGCATCACTCTCTACCGTAGACAGCGCAGCATGTGCTGGTAATGCTGTTGTTGGTTTATTACAGGACTGAGTCTGAATGGGTTCTACAGAAGATCGTGTAGTCTGAGGTGTCTTAAGAGCCATCCTTTTACGGGTTGGGGGCTTTAGTCCTGATTGTTTCACTTGGGGTATACCACCAGAGCTTGAAGGCTTTGCAACAGCAGTGAATTTATATCCAGTGACAGAAGAAACCATTGAGGTCTTAACAGTGCTAGCTGACGCTGTGTTCTTGACAGGTGCGATGTTCTTCCCCTTATTCATCTGTACTGTATCCCTCTTGCCAAGCAGGGTGGTGGATGATGTGTCGGGATGATGCGGGGCCTGTGACCCCTGGATAGTCTTTGGTTTGACCACTACTGATGAGCTCATGGACGACTGTGGCCTTGGTGGAAAACTGGATTTGGGATAGCTGAGCTTAGAGGAAAGTTGAGGAAGCTGTCTTTTGATTGGAAGTTTTGTGGGAGGCTTGTTCTCATTTGCTGGTTCTGATGTACTGTGACTTGAAGTACAGTTCACCGAGACCTTCTGACCTGAGCTCTCAGTCACCTGCACAGTATCAGTTCCATTGTGATTACTCACACCAACAAGCTCATCATTTGATTGGGCCTCAATACTGTTGATCACAGACAGTCTTTTTCTCATCGGTGTTGGCTTCGCATCTCTCAGTATCTCAAATCTGGATTCTTTGCCAAAAACGATTGGTGTGGATGTAACCATGAAACTTGTCTTCAAGTCCAGTGTATCATCCAAACAAAAAATACTGTTTCTGCTGATATCAGAGGAGGGAACGGACTCAACTTCAGCCAATCCAGGTCTCTCTGTTGTTTTGTGATGCTCCTCTGCTTTGAGCTCAGGAGCATCATTGGGAGCATCTACAGAGCAAACAAAAGCTGAGGTGCTTATCTCAACTTCTGTTTCTCTGCTGTTAGAGACAGGTTTAGTGATTTCCACTGAGTTAGAAGCACCATTAACCTGGTCTGCTAATTCTGTGCTTGGGGGTTTTATTTCTACAGCGGTGTCCTTCAAAACTGGAACTTCTGGCGGAGTAAAATCAGTGGTTGCATTATGTTTAGTAAACTCTGTCTCAGCTGGTTTTAAAATATCTGAGCTTGATTGTTCAATCTCACCAGAGGGTTGATCAGGAGCACTGGCCATTTGCTCCACAACATCAACTGTTACATTGACTTTTAAATTAGCTTCCTCTGTGTTTTTTATTTTATCATCCTCAGTCGAGTTAAGACTACCATTTGGTTTTTCTTCTGGCTGAATGTCTATAGTTCCTTCAAGCTTTTCATTGAGCTGTTCTGTAGTAGTGTTTAAGGGTGCATTGTTATCATCAGATGAATTGGATTTAGAATGTGTGCTGTCTATATTAGGAATATCCACAGTTTCATTAACCCCATTGTCGGGACTCTCTTTAAGGTCATGTGACTGGACCAGGTCAACAGTGGTATTTCCTGACTCAGCCTTTATATTGGGGACATCAATATCCACTGTTGAATTAGGGTCAAACCTCTCCTTTGACTCTTGAGACTCAAAAGTGCTGTTCTTCTCCCTGATGTTGTGTAGATCAACAGTCATATTACCACCAGTGTCAGACCGTTCTTTCAAGTCTTGAGTCACATCAAAAGTGCTGTTCTTCAATTCTGCACTCATGAAATCAGATTTCTCTAAAGATGTAGTGGATACCGTGGGATCATTGCAGTGTCCATCTGCTTTATCTGCTGCTGCACTAATGTCTTTCTCATTCTGTAGTGATCTAGTAGACACGCTTCCATCTGCCAACTGACAGGGTGCTCCAAGAGAGTGATTAAAAACAGAATCATCCTTATTTTTGGTTTGATTTTCTGATGGTGTGCAAGCAGGGGAATTCAACACAGTACCTGTTTCATTTAAAAGAAACGACGGGCCGACAGTGTCATCAAGAAATCCAGACACTTGGGGAAAAGGTTCATCTGCAATTGAATAGAAACTAGAACACAGATCCGGCAATTTGATAGCCTGGTAAGAGGAAATGGGTTTCTGAAGAGTTGGTCCACCCAATACATTTCCACCGGCCTGGGCAAGCTTTCGCCTTAGAAAGCTCTCCATATCAATAGCAGGCGGGT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU7538 True 2349 TUCP 0.43 7 10427223 10433018

Neighbor

gene id symbol gene type direction distance location
CI01000000_10351921_10370020 ATL3 coding upstream 56378 10351070 ~ 10370845 (+)
CI01000000_10340249_10349242 YIF1A coding upstream 77885 10340249 ~ 10349338 (+)
CI01000000_10327801_10328403 CCDC85B coding upstream 98044 10327641 ~ 10329179 (+)
CI01000000_10248953_10267217 MRPL11 coding upstream 159925 10248670 ~ 10267298 (+)
CI01000000_10221350_10222181 HER5 coding upstream 203903 10220646 ~ 10223320 (+)
CI01000000_10438043_10440571 FOXO4 coding downstream 4896 10437914 ~ 10440579 (+)
CI01000000_10494312_10497984 NA coding downstream 61220 10494238 ~ 10498431 (+)
CI01000000_10567977_10572247 NA coding downstream 134550 10567568 ~ 10572412 (+)
CI01000000_10742101_10743063 NA coding downstream 308076 10741094 ~ 10743095 (+)
CI01000000_10753397_10759674 NA coding downstream 320379 10753397 ~ 10759924 (+)
G6802 NA non-coding upstream 20854 10403286 ~ 10406369 (+)
G6792 NA non-coding upstream 90261 10331167 ~ 10336962 (+)
G6789 NA non-coding upstream 117273 10306880 ~ 10309950 (+)
G6805 NA non-coding upstream 198487 10226692 ~ 10228736 (+)
G6806 NA non-coding upstream 322470 10103510 ~ 10104753 (+)
G6877 NA non-coding downstream 2134 10435152 ~ 10435382 (+)
G6807 NA non-coding downstream 13199 10446217 ~ 10450616 (+)
G6882 NA non-coding downstream 30529 10463547 ~ 10464041 (+)
G6929 NA non-coding downstream 151388 10584406 ~ 10584670 (+)
G6930 NA non-coding downstream 152644 10585662 ~ 10588647 (+)
G6811 NA other upstream 105544 10204831 ~ 10321679 (+)
G2850 NA other upstream 5700741 4725986 ~ 4726482 (+)
G2774 NA other upstream 5972991 4453778 ~ 4454232 (+)
G579 NA other upstream 8518415 1767917 ~ 1908808 (+)
G435 NA other upstream 8994369 1425121 ~ 1432854 (+)
G7018 NA other downstream 545471 10978489 ~ 10980872 (+)
G7153 NA other downstream 811439 11244457 ~ 11245633 (+)
G7514 NA other downstream 1703504 12136522 ~ 12137008 (+)
G7522 NA other downstream 1745351 12178369 ~ 12179008 (+)
G9201 NA other downstream 3794419 14215024 ~ 14234941 (+)

Expression


Co-expression Network