G103147


Basic Information

Item Value
gene id G103147
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056713.1
NCBI id CM032082.1
chromosome length 23709629
location 2023242 ~ 2029167 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU152454
ATGAAATACACCTGGACTtaagacacactctcacagtaGTCAAGACctcaggaggaagaggagcttTCCACACTACAGTTTCGCCCTTCTGCGCCGTGAACCACAGACAGCAGCCATGTCTTCTGGAGCAGTCCCTAAAGTAGACCTTGACGCTGACTTTTACTATGACTATGAGACTCTGCGCATTGGAGGCCTGGTATTTGCCGGGGTCATTGTGGTACTATCTGTCCTCCTCCTGACTGGTAACCGCATCAGACGGTGTGGCAAGGGGAAGgCAAAGCACGCGGATGAAGGCATTTAATATGGCCATTTCTATACTGGATGGTTTCAAGATGTGAGCAGTCtgtaaatttggaaaaaaagaagacattatgtttaatttaacacttaaatttttgatttaattgttaaacatttcattaaaacattgatTTGGAAAGGTATAGTCTTGAAGACCAATAAAGGATATATTTAAGGATGTATTTAATCAGATatgtaatttctttctttctcacacacacacacacacacacacacacacacacacacacacacac

Function

GO:

id name namespace
GO:0006030 chitin metabolic process biological_process
GO:0006032 chitin catabolic process biological_process
GO:0046348 amino sugar catabolic process biological_process
GO:1901072 glucosamine-containing compound catabolic process biological_process
GO:0006026 aminoglycan catabolic process biological_process

KEGG:

id description
ko04974 Protein digestion and absorption

RNA

RNA id representative length rna type GC content exon number start site end site
TU152454 True 557 lncRNA 0.41 6 2023242 2029167

Neighbor

gene id symbol gene type direction distance location
LOC122359198 dscaml1,LOC107752281,LOC107728164,LOC107699210 coding downstream 9329 1906854 ~ 2013913 (-)
si:dkey-202l22.6 LOC107752287,LOC107699209,LOC107566080 coding downstream 126967 1889683 ~ 1896275 (-)
si:dkey-202l22.3 si:dkey-202l22.3,LOC107566085,LOC107752291,LOC107699219,LOC107699177,LOC107592664,LOC107728162 coding downstream 140734 1878215 ~ 1882508 (-)
LOC122358522 fkrp,LOC107699218,LOC107752280,LOC107566082,LOC107592673,LOC107728156,LOC107699175 coding downstream 215758 1801988 ~ 1807484 (-)
LOC122359511 NA coding downstream 255171 1767053 ~ 1768071 (-)
fxyd6 LOC107699233,LOC107752282,LOC107561492,LOC107574918,LOC107699187,LOC107728170 coding upstream 455 2029622 ~ 2048237 (-)
tmprss13a LOC107699232,LOC107564057,LOC107752289 coding upstream 19476 2048643 ~ 2060046 (-)
scn4ba scn4ba,LOC107564054,LOC107699188,LOC107728166,LOC107699235,LOC107561493,LOC107752283 coding upstream 74672 2103839 ~ 2133148 (-)
zgc:172282 zgc:172282,LOC107697541,LOC107758157,LOC107749639,LOC107678250,LOC107555640,LOC108433964 coding upstream 260664 2289831 ~ 2386870 (-)
LOC122359190 cog6,LOC107670561,LOC107699813 coding upstream 1011858 3041025 ~ 3099945 (-)
G103140 LOC107752290,LOC107699229,LOC107728157,LOC107566086,LOC107592665,LOC107699176 non-coding downstream 152893 1867855 ~ 1870349 (-)
G103129 NA non-coding downstream 178247 1843412 ~ 1844995 (-)
G103090 NA non-coding downstream 197225 1780318 ~ 1826017 (-)
G103114 NA non-coding downstream 278769 1741721 ~ 1744473 (-)
G103080 NA non-coding downstream 396509 1622684 ~ 1626733 (-)
LOC122359217 NA non-coding upstream 50905 2080072 ~ 2083265 (-)
G103155 NA non-coding upstream 72370 2101537 ~ 2133846 (-)
G103196 NA non-coding upstream 432257 2461424 ~ 2462404 (-)
G103208 NA non-coding upstream 564281 2593448 ~ 2594442 (-)
G103214 lpar6a,LOC107593460,LOC107701423,LOC107708689,LOC107598790,LOC107674900,LOC107713545 non-coding upstream 674986 2704153 ~ 2705023 (-)
G103130 prkd2,LOC107699186,LOC107728165,LOC107699228,LOC107566079 other downstream 177748 1844999 ~ 1845494 (-)
G103094 slc1a5,LOC107752279,LOC107699227,LOC107699184,LOC107566078,LOC107592660 other downstream 194942 1777020 ~ 1828300 (-)
LOC122359153 lrrc7,LOC107709201,LOC107659039,LOC107692363,LOC107739104 other downstream 1872651 98628 ~ 150591 (-)
scn2b scn2b,LOC107752284,LOC107699236,LOC107564053,LOC107699190,LOC107561494,LOC107728168 other upstream 109400 2138567 ~ 2161269 (-)
G103183 NA other upstream 178180 2207347 ~ 2291926 (-)
LOC122359207 nicn1,LOC107691891,LOC107564394,LOC107708487,LOC107678153 other upstream 644634 2673801 ~ 2675825 (-)
nek3 nek3,LOC107598788,LOC107598810 other upstream 690715 2719882 ~ 2746124 (-)
LOC122359209 lhfp,LOC107593461,LOC107740377,LOC107691645,LOC107751385,LOC107577306,LOC108426961,LOC107670626 other upstream 726852 2756019 ~ 2870153 (-)

Expression


Co-expression Network