G103377


Basic Information

Item Value
gene id G103377
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056713.1
NCBI id CM032082.1
chromosome length 23709629
location 3420311 ~ 3420777 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU152727
TGGCAAAACCATTGTTTGATGTTTATTgtaaaatcacaattacaataacactttagtCACAATTATTTCTTGCATAAAATTGATGTATATCTTTTGTGATATAGATacatggttaaaaataaaaattagtttgactttatttgattatcctaaaataatcatccttatacagaaatatttgtaaatCTTTAACTAATATTCAATACATATTTAATGACAATGCATATTAAGTGTTTGTAAAGTTGCTGAATGACATGTATTTGTGTGGATAAATATCCAAGAGGTtacaaaatatgtgcattttatataatattaatatacagtattgttTGTTCACCCATCTGTTAAACACAGGCATTTTcagcctttaaagttgttcagaTATGTACCAAGACCTCATTAAGGCTGCTATGGAGAGCTTTGAGTCTCGAGAGTCACATGCAATCAAGAGCAACTCACCATAGAGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU152727 True 467 lncRNA 0.28 1 3420311 3420777

Neighbor

gene id symbol gene type direction distance location
LOC122358542 LOC107740375,LOC107593464,LOC107670538,LOC107726642,LOC107561479,LOC107699815 coding downstream 9445 3378157 ~ 3410866 (-)
LOC122359190 cog6,LOC107670561,LOC107699813 coding downstream 320366 3041025 ~ 3099945 (-)
zgc:172282 zgc:172282,LOC107697541,LOC107758157,LOC107749639,LOC107678250,LOC107555640,LOC108433964 coding downstream 1033441 2289831 ~ 2386870 (-)
scn4ba scn4ba,LOC107564054,LOC107699188,LOC107728166,LOC107699235,LOC107561493,LOC107752283 coding downstream 1287163 2103839 ~ 2133148 (-)
tmprss13a LOC107699232,LOC107564057,LOC107752289 coding downstream 1360265 2048643 ~ 2060046 (-)
mtus2b LOC107670531,LOC107593466,LOC107561476,LOC107699816,LOC107726712,LOC107740389,LOC107740390 coding upstream 4165 3424942 ~ 3462391 (-)
rcbtb2 rcbtb2,LOC107593467,LOC107561474,LOC107699818,LOC107670520 coding upstream 41716 3462493 ~ 3479800 (-)
mre11a mre11a,LOC107727241 coding upstream 417079 3837856 ~ 3927360 (-)
LOC122359034 LOC107726111 coding upstream 603036 4023813 ~ 4042596 (-)
pik3cb pik3cb,LOC107655300,LOC107726123,LOC107567258,LOC107747314,LOC107598784,LOC107671515 coding upstream 623970 4044747 ~ 4076667 (-)
G103371 NA non-coding downstream 59939 3359828 ~ 3360372 (-)
G103363 NA non-coding downstream 267647 3151728 ~ 3152664 (-)
G103362 NA non-coding downstream 268836 3150603 ~ 3151475 (-)
G103215 NA non-coding downstream 714243 2705686 ~ 2706068 (-)
G103214 lpar6a,LOC107593460,LOC107701423,LOC107708689,LOC107598790,LOC107674900,LOC107713545 non-coding downstream 715288 2704153 ~ 2705023 (-)
G103404 LOC107699805 non-coding upstream 60386 3481163 ~ 3485630 (-)
G103416 NA non-coding upstream 117431 3538208 ~ 3547028 (-)
G103435 NA non-coding upstream 178189 3598966 ~ 3603766 (-)
G103438 NA non-coding upstream 187072 3607849 ~ 3609465 (-)
G103452 NA non-coding upstream 404502 3825279 ~ 3825555 (-)
LOC122358351 thsd7aa,LOC107722152,LOC107670038,LOC107698991,LOC108410784,LOC107712624,LOC107555944,LOC107566934 other downstream 176045 3152993 ~ 3244266 (-)
LOC122359209 lhfp,LOC107593461,LOC107740377,LOC107691645,LOC107751385,LOC107577306,LOC108426961,LOC107670626 other downstream 550158 2756019 ~ 2870153 (-)
nek3 nek3,LOC107598788,LOC107598810 other downstream 674187 2719882 ~ 2746124 (-)
LOC122359207 nicn1,LOC107691891,LOC107564394,LOC107708487,LOC107678153 other downstream 744486 2673801 ~ 2675825 (-)
G103183 NA other downstream 1128385 2207347 ~ 2291926 (-)
LOC122359312 fndc3a,LOC107740387,LOC107593468,LOC107726703,LOC108426957,LOC107699795,LOC108277863 other upstream 331202 3751979 ~ 3773814 (-)
G103449 NA other upstream 395285 3816062 ~ 3816742 (-)
pcp4b NA other upstream 1085579 4506356 ~ 4572999 (-)
LOC122359119 NA other upstream 1287037 4707814 ~ 4709080 (-)
G103825 NA other upstream 2017271 5438048 ~ 5438947 (-)

Expression


Co-expression Network