G103435


Basic Information

Item Value
gene id G103435
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056713.1
NCBI id CM032082.1
chromosome length 23709629
location 3598966 ~ 3603766 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU152807
tgcccgaagacaactcaataattcaagactcaataagagacacgagaatttgttccaaatgtgtaacttgcaagtgacgtcgcttcagttgcaagggaagcaaactgtttccagctctcttcagtttgcttctgaaacgcagcccctcacacatctttatttatacataaagaaaaagccacccccataaaaaggttacaatagggcacattcctttcttgtggGTGCTTGATCCTGATTAGATATCATTTAGGCGGAATCTGCTTGGGGGTGAGTTCAGCAAGAGTTCATCAAGGTGTCGGCTCTGGACAGTGTCCTGTCCTTTGTGAGCGTGTtgctctttacacacacacacacacacacagaagttcttcaaaaccatattgatatatgagacaataatgtcaataaaagtacaaaacaagaatagtagttccaacaTTT

Function

GO:

id name namespace
GO:0099080 supramolecular complex cellular_component
GO:0099081 supramolecular polymer cellular_component
GO:0044422 obsolete organelle part cellular_component
GO:0044424 obsolete intracellular part cellular_component
GO:0044430 obsolete cytoskeletal part cellular_component
GO:0044446 obsolete intracellular organelle part cellular_component
GO:0005874 microtubule cellular_component
GO:0015630 microtubule cytoskeleton cellular_component
GO:0099512 supramolecular fiber cellular_component
GO:0099513 polymeric cytoskeletal fiber cellular_component
GO:0005622 intracellular anatomical structure cellular_component
GO:0043226 organelle cellular_component
GO:0043228 non-membrane-bounded organelle cellular_component
GO:0043229 intracellular organelle cellular_component
GO:0043232 intracellular non-membrane-bounded organelle cellular_component

KEGG:

id description
ko03440 Homologous recombination
ko03460 Fanconi anemia pathway
ko04110 Cell cycle
ko04111 Cell cycle - yeast
ko04113 Meiosis - yeast
ko04114 Oocyte meiosis
ko04914 Progesterone-mediated oocyte maturation

RNA

RNA id representative length rna type GC content exon number start site end site
TU152807 True 444 lncRNA 0.41 2 3598966 3603766

Neighbor

gene id symbol gene type direction distance location
rcbtb2 rcbtb2,LOC107593467,LOC107561474,LOC107699818,LOC107670520 coding downstream 119166 3462493 ~ 3479800 (-)
mtus2b LOC107670531,LOC107593466,LOC107561476,LOC107699816,LOC107726712,LOC107740389,LOC107740390 coding downstream 136575 3424942 ~ 3462391 (-)
LOC122358542 LOC107740375,LOC107593464,LOC107670538,LOC107726642,LOC107561479,LOC107699815 coding downstream 188100 3378157 ~ 3410866 (-)
LOC122359190 cog6,LOC107670561,LOC107699813 coding downstream 499021 3041025 ~ 3099945 (-)
zgc:172282 zgc:172282,LOC107697541,LOC107758157,LOC107749639,LOC107678250,LOC107555640,LOC108433964 coding downstream 1212096 2289831 ~ 2386870 (-)
mre11a mre11a,LOC107727241 coding upstream 234090 3837856 ~ 3927360 (-)
LOC122359034 LOC107726111 coding upstream 420047 4023813 ~ 4042596 (-)
pik3cb pik3cb,LOC107655300,LOC107726123,LOC107567258,LOC107747314,LOC107598784,LOC107671515 coding upstream 440981 4044747 ~ 4076667 (-)
foxl2a LOC107655294,LOC107579733,LOC107726117,LOC107598792,LOC107677070 coding upstream 480025 4083791 ~ 4088018 (-)
rinl LOC107741520,LOC107677047,LOC107655292,LOC107567256,LOC107598786,LOC107726114 coding upstream 562743 4166509 ~ 4187844 (-)
G103416 NA non-coding downstream 51938 3538208 ~ 3547028 (-)
G103404 LOC107699805 non-coding downstream 113336 3481163 ~ 3485630 (-)
G103377 NA non-coding downstream 178189 3420311 ~ 3420777 (-)
G103371 NA non-coding downstream 238594 3359828 ~ 3360372 (-)
G103363 NA non-coding downstream 446302 3151728 ~ 3152664 (-)
G103438 NA non-coding upstream 4083 3607849 ~ 3609465 (-)
G103452 NA non-coding upstream 221513 3825279 ~ 3825555 (-)
G103454 NA non-coding upstream 222788 3826554 ~ 3826758 (-)
G103455 NA non-coding upstream 223196 3826962 ~ 3827178 (-)
G103464 NA non-coding upstream 231424 3835190 ~ 3836248 (-)
LOC122358351 thsd7aa,LOC107722152,LOC107670038,LOC107698991,LOC108410784,LOC107712624,LOC107555944,LOC107566934 other downstream 354700 3152993 ~ 3244266 (-)
LOC122359209 lhfp,LOC107593461,LOC107740377,LOC107691645,LOC107751385,LOC107577306,LOC108426961,LOC107670626 other downstream 728813 2756019 ~ 2870153 (-)
nek3 nek3,LOC107598788,LOC107598810 other downstream 852842 2719882 ~ 2746124 (-)
LOC122359207 nicn1,LOC107691891,LOC107564394,LOC107708487,LOC107678153 other downstream 923141 2673801 ~ 2675825 (-)
G103183 NA other downstream 1307040 2207347 ~ 2291926 (-)
LOC122359312 fndc3a,LOC107740387,LOC107593468,LOC107726703,LOC108426957,LOC107699795,LOC108277863 other upstream 148213 3751979 ~ 3773814 (-)
G103449 NA other upstream 212296 3816062 ~ 3816742 (-)
pcp4b NA other upstream 902590 4506356 ~ 4572999 (-)
LOC122359119 NA other upstream 1104048 4707814 ~ 4709080 (-)
G103825 NA other upstream 1834282 5438048 ~ 5438947 (-)

Expression


Co-expression Network