pcp4b


Basic Information

Item Value
gene id pcp4b
gene name NA
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056713.1
NCBI id CM032082.1
chromosome length 23709629
location 4506356 ~ 4572999 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU153182
ACAGTGATGGCATTGAGGAGACGGCTTGTACTTTATAAAGCTCCCTGAGAGTGAGGAAACCACTGTGAACTCGTTACAGCCGAAGCACGCCGAGGAAAACCCGTGAGATAACACCTGAACCATGAGCGAGAGGCAAGGATCCGGAGCAGCCAGTGGCAACAGCAAAACCTCTGGGGCACAAGATGCATCCAAGAAAGACATCCCCGAGGACTTTGACATTGACATGGACGCCCCTGAAACCGAGAAGGCAGCTGTCGCCATTCAATCACAGTTCAGGAAGttccagaagaagaagaatgacGAAAAGTCGTAGTTGCCAGTGGACCGCTCTGTCCGTACGGCCCCATCAGGACAGCATGGTTTGATGTTGCATGTAATAGAATCCATTCTGTATGGACTCAAGGGGCGTGGGAGAGGGGAAATCAAGGTCGTAATCCGTCAATTACTGATTATTTTACTGCTGTAACTGTGAATCCTGTAGTTTATATTGATATTGGTTCTAGCTTTACTCTCCATTCTAGCCAAGAATATCTGTTTTACTATTGGTgcatgatttgatttttttttacctcaaagAGCTGGATCGCTGGCCTGCCCTTTATTTGTGAAAGCACAATATGTTTTCATTGTGAGTTGCTTACAAAATCGATTTAAGTCAGAAACCGCGAGCGTCAcgtgtatataaatatagagcagaactttatttttgtttcacacCATTAGTCCTCAGCTCATGAAATGCTTTAGCATCCATTCTCATCCCAGTGGGGTTCTAAAAATAGTCCGTCTTTTGAAAACCCATATTGTTGAATAATTCCCAGCTCATCTTCCCAAATCCCTCGGTTGTGTTCGGTTCTCTTTATTGAATTCAGTGCTGGATGAAATGACTCGAGAGCGAGTGTTTGATTGTCTAGTTTGCCGTGGCATATCATAACATTTCTGTTCGTTTTTCTTCCTTTGCAAAGGATCATGGCACAATCATCGGCCAAATCAAACACTCAATGATTTCTATCTCACCTCAGCTCCTTTCTCAACTCAGTCTGAttgaaaaacaaactattaataaacatccTTGAGTCTCTGGAAACTAAATAaaaaaaaaaaaaaaaaaaaa
>XM_043258826.1
CATTACTGTAGGAATAAAAGAGGACAGTAATATTTCAGACAGAAGGGAGGAGATTTGCCGACGGCTCTCCTATTGGTTTAGTGCAACAGTGATGGCATTGAGGAGACGGCTTGTACTTTATAAAGCTCCCTGAGAGTGAGGAAACCACTGTGAACTCGTTACAGCCGAAGCACGCCGAGGAAAACCCGTGAGATAACACCTGAACCATGAGCGAGAGGCAAGGATCCGGAGCAGCCAGTGGCAACAGCAAAACCTCTGGGGCACAAGATGCATCCAAGAAAGACATCCCCGAGGACTTTGACATTGACATGGACGCCCCTGAAACCGAGAAGGCAGCTGTCGCCATTCAATCACAGTTCAGGAAGttccagaagaagaagaatgacGAAAAGTCGTAGTTGCCAGTGGACCGCTCTGTCCGTACGGCCCCATCAGGACAGCATGGTTTGATGTTGCATGTAATAGAATCCATTCTGTATGGACTCAAGGGGCGTGGGAGAGGGGAAATCAAGGTCGTAATCCGTCAATTACTGATTATTTTACTGCTGTAACTGTGAATCCTGTAGTTTATATTGATATTGGTTCTAGCTTTACTCTCCATTCTAGCCAAGAATATCTGTTTTACTATTGGTgcatgatttgatttttttttacctcaaagAGCTGGATCGCTGGCCTGCCCTTTATTTGTGAAAGCACAATATGTTTTCATTGTGAGTTGCTTACAAAATCGATTTAAGTCAGAAACCGCGAGCGTCAcgtgtatataaatatagagcagaactttatttttgtttcacacCATTAGTCCTCAGCTCATGAAATGCTTTAGCATCCATTCTCATCCCAGTGGGGTTCTAAAAATAGTCCGTCTTTTGAAAACCCATATTGTTGAATAATTCCCAGCTCATCTTCCCAAATCCCTCGGTTGTGTTCGGTTCTCTTTATTGAATTCAGTGCTGGATGAAATGACTCGAGAGCGAGTGTTTGATTGTCTAGTTTGCCGTGGCATATCATAACATTTCTGTTCGTTTTTCTTCCTTTGCAAAGGATCATGGCACAATCATCGGCCAAATCAAACACTCAATGATTTCTATCTCACCTCAGCTCCTTTCTCAACTCAGTCTGAttgaaaaacaaactattaataaacatccTTGAGTCTCTGGAAACTAAA

Function

NR:

description
Purkinje cell protein 4-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU153182 False 1114 lncRNA 0.42 4 4506356 4572914
XM_043258826.1 True 1177 mRNA 0.43 3 4553901 4572999

Neighbor

gene id symbol gene type direction distance location
bace2 zgc:103530,LOC107726120,LOC107655814,LOC107562815,LOC107677045,LOC108443098 coding downstream 193781 4299446 ~ 4312575 (-)
nop53 gltscr2,LOC107567261,LOC107562810,LOC107677048 coding downstream 256017 4244782 ~ 4250339 (-)
LOC122359522 LOC107567262,LOC100331216,LOC107655289,LOC108443093,LOC107677092,LOC107741519,LOC103038690 coding downstream 266518 4218880 ~ 4239838 (-)
dmac2 LOC107655290,LOC107726118,LOC107567257,LOC107741522 coding downstream 307283 4194900 ~ 4199073 (-)
sirt2 sirt2,LOC107726128,LOC107655297,LOC107677097 coding downstream 312086 4188592 ~ 4194270 (-)
igsf5b LOC107655816,LOC107562813,LOC107709026,LOC107677050,LOC107567573,LOC107709027 coding upstream 17500 4590499 ~ 4608912 (-)
sh3bgr sh3bgr,LOC107567578,LOC107562814,LOC107677098,LOC107747684 coding upstream 36725 4609724 ~ 4624656 (-)
get1 wrb,LOC107730994,LOC107747674 coding upstream 58532 4631531 ~ 4635636 (-)
LOC122359422 NA coding upstream 214331 4787330 ~ 4788429 (-)
LOC122359246 NA coding upstream 224078 4797077 ~ 4799964 (-)
G103515 NA non-coding downstream 542316 3963762 ~ 3964040 (-)
G103514 NA non-coding downstream 543071 3962711 ~ 3963285 (-)
G103508 NA non-coding downstream 559946 3946207 ~ 3946410 (-)
G103464 NA non-coding downstream 670108 3835190 ~ 3836248 (-)
G103455 NA non-coding downstream 679178 3826962 ~ 3827178 (-)
G103753 LOC107562805,LOC107655817,LOC107730991,LOC107567576,LOC107747676 non-coding upstream 83420 4656419 ~ 4659476 (-)
G103754 NA non-coding upstream 89597 4662596 ~ 4667353 (-)
G103756 NA non-coding upstream 104597 4677596 ~ 4678231 (-)
G103796 NA non-coding upstream 172048 4745047 ~ 4759217 (-)
G103813 NA non-coding upstream 606283 5179282 ~ 5179489 (-)
G103449 NA other downstream 689614 3816062 ~ 3816742 (-)
LOC122359312 fndc3a,LOC107740387,LOC107593468,LOC107726703,LOC108426957,LOC107699795,LOC108277863 other downstream 732542 3751979 ~ 3773814 (-)
LOC122358351 thsd7aa,LOC107722152,LOC107670038,LOC107698991,LOC108410784,LOC107712624,LOC107555944,LOC107566934 other downstream 1262090 3152993 ~ 3244266 (-)
LOC122359209 lhfp,LOC107593461,LOC107740377,LOC107691645,LOC107751385,LOC107577306,LOC108426961,LOC107670626 other downstream 1636203 2756019 ~ 2870153 (-)
nek3 nek3,LOC107598788,LOC107598810 other downstream 1760232 2719882 ~ 2746124 (-)
LOC122359119 NA other upstream 134815 4707814 ~ 4709080 (-)
G103825 NA other upstream 865049 5438048 ~ 5438947 (-)
pgm2l1 pgm2l1,LOC107684026,LOC107677044,LOC107569072 other upstream 1164457 5737456 ~ 5749751 (-)
LOC122359408 LOC107744036,LOC107704290,LOC107562996,LOC107680065 other upstream 1221804 5794803 ~ 5801081 (-)
G104011 NA other upstream 1573174 6146173 ~ 6146517 (-)

Expression


Co-expression Network