G108573


Basic Information

Item Value
gene id G108573
gene name NA
gene type unknown
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056713.1
NCBI id CM032082.1
chromosome length 23709629
location 21736680 ~ 21737687 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU160427
AGCCGCCACGCGCAGCCACGTAGAAAATGGACTCGATGCTGCTTGTCACGCTGAGGCCGGTAAAGGATCGTGGTTTCACGTCAGCGACGGCAGCGTCCATCCGGTTACAGAGGCCAAAGTGCAGGGTTCCCAAGCCTACCTCCTGTTCTACGAGAAGATCTCATAACTCACGCCAGGAACGATCTTTGATGCGAAGGGCTGCTGGTGTTTTTCGTCCGACTcgtttgctgctgctgctgctgggaaaccctgctaaaacacactGCAAACGAATTGAAAACTTGAATCAAAGCATcgtctttttccttttttctgtgaTCAGCTGCTGTTCAGGGCAAGGTTTTAATTCATCCAGACCAGATGCAGAACTAACTTGATCCATTTTTTAATTGagttaatgattatttaaaagcaattcaatatttcttttcttATCTTTAGGCCGTGATGGAACGATTTGATGAGACTTTGGTGTGGTTGTTTGCCTCATACAGCGTACTTAAGTATCTGCTGCCAAGACTGATAGTCATTTTGCATGAATCTAATGAAGAAAAGTCATATTCCATCccaacattaatatatataattcattttcattgttataaagaagtcttatttttatttatgtttagtaAATAATCAtggacacatttttaaatagtactaTTTAGAAATGCGACAatctaaatcaataaataacaatttttgttttattttggggtgtAATGTGACATTTCTTTAACGAGATTCTTCCTTTTTACTtgtaaaactaaattgaaatatatattggtacaattttataatgcaataaatacctTACTGTCCTCTGTATAATggcaaatgttttgttttctaacgTACTAGggcttaaaatacaaataaataaaattgacagTTTTCACCTCTGAAA

Function

GO:

id name namespace
GO:0044424 obsolete intracellular part cellular_component
GO:0005634 nucleus cellular_component
GO:0043227 membrane-bounded organelle cellular_component
GO:0043231 intracellular membrane-bounded organelle cellular_component

KEGG:

id description
ko03040 Spliceosome

RNA

RNA id representative length rna type GC content exon number start site end site
TU160427 True 910 TUCP 0.37 2 21736680 21737687

Neighbor

gene id symbol gene type direction distance location
LOC122358927 NA coding upstream 12700 21715201 ~ 21723980 (+)
mtnr1ba mtnr1ba,LOC107745177,LOC107585812,LOC107669925,LOC107705472,LOC108413652 coding upstream 153773 21567245 ~ 21582907 (+)
fat3a fat3,fat3a,LOC107564369,LOC107705473,LOC107585783,LOC107698854,LOC107745210 coding upstream 182140 21420083 ~ 21554540 (+)
gal3st2 LOC107698869,LOC107745180,LOC107585737,LOC107564367 coding upstream 440778 21285387 ~ 21295902 (+)
efhd1 efhd1,LOC107585735,LOC107741634,LOC107698858,LOC107669899,LOC107564379 coding upstream 473236 21255183 ~ 21263444 (+)
LOC122358818 si:ch211-276c2.2,LOC107698872,LOC107585786,LOC107669856,LOC107739921,LOC108278112,LOC108440474 coding downstream 53919 21791606 ~ 21833216 (+)
clstn2b si:ch211-276c2.2,LOC107698872,LOC107669856,LOC107739921,LOC107585786 coding downstream 104976 21842663 ~ 22014307 (+)
pxylp1 pxylp1,LOC107669877,LOC107558839,LOC107722277,LOC107698201,LOC107585747 coding downstream 313903 22051590 ~ 22065594 (+)
sgpp2 sgpp2,LOC107669878,LOC107705636,LOC107558808,LOC107585790,LOC107722257 coding downstream 429427 22167114 ~ 22174542 (+)
scaf4b LOC107669875,LOC107722265,LOC107670118,LOC107585791,LOC107558831,LOC107705626 coding downstream 445861 22183548 ~ 22205101 (+)
G108569 LOC107573028,LOC107705465,LOC107697810,LOC107685875,LOC107564371,LOC107566573,LOC107585758,LOC107669894,LOC107573797 non-coding upstream 9110 21727060 ~ 21727570 (+)
G108553 NA non-coding upstream 119487 21616656 ~ 21617193 (+)
G108427 NA non-coding upstream 534171 21201387 ~ 21202509 (+)
G108418 LOC107086176 non-coding upstream 546307 21072081 ~ 21190373 (+)
G108394 NA non-coding upstream 886765 20848722 ~ 20849915 (+)
G108648 NA non-coding downstream 288111 22025798 ~ 22026309 (+)
G108654 LOC107739918,LOC107722272,LOC107722276,LOC107558836,LOC107669876,LOC107585787,LOC107696356,LOC107565148 non-coding downstream 290750 22028437 ~ 22036838 (+)
G108713 NA non-coding downstream 439705 22177392 ~ 22178630 (+)
G108721 NA non-coding downstream 528145 22265832 ~ 22323620 (+)
G108723 NA non-coding downstream 603045 22340732 ~ 22355913 (+)
G108572 LOC107745176,LOC107698871 other upstream 962 21735014 ~ 21735718 (+)
G108571 NA other upstream 3573 21731981 ~ 21733107 (+)
LOC122358705 NA other upstream 10414 21724404 ~ 21726266 (+)
G108431 LOC107698865,LOC107576883,LOC107559186,LOC107741632 other upstream 522187 21211810 ~ 21214493 (+)
G108230 hspb6,LOC107675875,LOC107745202,LOC107571389,LOC107701566,LOC107747664 other upstream 1482409 20189033 ~ 20254271 (+)
G108951 LOC107560855,LOC107670124,LOC107731823,LOC107558828,LOC107669926,LOC107706052 other downstream 1037962 22775649 ~ 22777725 (+)
G108990 NA other downstream 1211453 22949140 ~ 22953513 (+)
msantd4 msantd4,LOC107566896,LOC107725759,LOC107670113,LOC107689580,LOC107756207,LOC107560841 other downstream 1218024 22955711 ~ 22959679 (+)
G109132 NA other downstream 1509088 23246775 ~ 23271291 (+)
G109193 NA other downstream 1771745 23509432 ~ 23510315 (+)

Expression


Co-expression Network