tmprss13a (LOC107699232,LOC107564057,LOC107752289)


Basic Information

Item Value
gene id tmprss13a
gene name LOC107699232,LOC107564057,LOC107752289
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056713.1
NCBI id CM032082.1
chromosome length 23709629
location 2048643 ~ 2060046 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043258170.1
GATAAGAGGGCAGTCCTAACTGTGTCTTGAAAAGCAGGTTAGAAATAGAAAACAGGGTCTCATTTTTCCCTTGGGATTGCAGACAGAGGTTGAAATCCTGCCCACCGTAATACATAGACACTTTGGATCTAACCATAGTCCTCACTCCCGTGTCTAATGGCAGACGATGACACGaaGGACCCTCCTCCACCATACTACTCTGTGGCAGGGGACCCACAGACGCCTCCTATGACCTACGAGGAGGTAATTCTTCAGGACCAATATGGGTTCACACAGAAACCTGTGCCAGTCTATGTTCCGATGGATCCACCGCCAGTACAGGTAGACGCCGTCATCATCACCACACAGCATGTTGTTGTTCCTTCAAAAAGGCAGAAGTCTTGCGGACGGAGTGCCAAGTGTTGGGGTGGATGTGTAGGTGCGCTGCTGGTGTTGGCTCTCATTGGACTGGCCATCTGGCTTGGAGTACGTTACGGATCCAAGTCGTATTCTGGAAATTATGAGAATGACTGCAAGGGACAAGATTGCAAAGAACAGGAACAGGGCAGTGACTGCAAGGGAAATGACTGCAACGAACAAGAACACGGCAGCGATTGCAAGGGAAAAGACTGCAACGAACAAGGGCACAAGACTGAAGATGGCACGAGTGTACCTGACGCCTGCTCCAACTCCTCCAAGCAGTGTGACGGCGTCCAAAACTGCCAGCAGGCCGCTGATGAGACGAACTGCGTGAGATTTGCAGAAGGTGGAGTGCTGCAGGTCAGAACTGCTCAGGATGGTCGATTCCTTCCAGTGTGTTATCAGGGATTGGATCAGGGTTATGCTGACCAGATCTGTGAACAGATGGGCTTTAGAAGGTCTTATGCATCAAATCCAGTGGATAGCAAGACGTCTGTAGCCCTTACTGTAGGAAAGAGATCAGCTAAACTAATACAGGGTCTGGTAAATGTCAGTTCGGGATGTCAGGATGAGAAAGCAGTCTCGCTTGAATGTACAGactgTGGCAAGCAGCAAACTGCCTCCAGGATCATAGGGGGCAGTGCCTCTCAAATTGGCCAGTGGCCTTGGCAGGTTAGCTTGCATTATGGTGGAAGCCATGTTTGTGGTGGATCACTCGTCGCTCCAGACTTTGTTGTGTCAGCTGCCCATTGCTTCCAAGGCGCAATGAAAAATTCGGCAAATTGGCGTGTCTATGTTGGAACTATTTCCCAGAGTGCCCTTCAGATCCCTTACCTCGTGACGAAGATTATAGTGAATGAGAACtacagcagcaacaacaacgatTATGATGTTACCTTACTGAAACTCAGCAGTCCTGTCACTTTCTCCAGCATTGTGCAGCCAGTTTGCTTTCCTACATTTGACCAAACCTTTTCTGATGGATCAGAGTGCTTGACATCTGGCTTTGGGACGACACAAGAGGGATCAGCCCATGCCTCTACAATCCTCATGGACGTGAAAGTGAATATCATCAACACTCAACTGTGTAACAGCAGTCAGGTGTACCGCGGGGCCATCACCAAGAATATGATATGCGCGGGTGATATGAACGGGGGCCGGGACTCCTGTCAGGGGGACAGCGGAGGTCCGCTGGTGTGCAAGAGGGATGATGACCGCTGGTATCTGGTTGGAATTACGAGCTGGGGAGCTGGATGCGGACAAAGACAAAGACCCGGAGTTTATAGCAGAGTGACCAGCCTCCTGCCCTGGATCTACAGCAAGATGCAGCAAGAGAAGCCCTGATGTCTCTCTTCGGTACGACGTGTCCCGAGGACAACAGTGGACAGAGAAAAAGATGAAGGACAGAGCGATGCACTTTGACATGGGATAATGTTGCAATATTTGTAGCCGTaattggaaaaaagaaaacagactttATTCATCCCGCATTCTCAAgtaagaaaacaataaaacaactgaACCTGGGAGAGCAGAGCTGCAGGCGTCGAGGACCTCGGGGTCCCCTTCTGTCGCTGTGCTTTCCTTATTCTCTTCTTCGCATTTTTACTGTAAGTTCAGGGCACAGCTGCTGAATCTGAGCCTTTGTCGCCTCTTTGTATTGGTATCTTTTCTTCGGTACTATCCTTGCACTGAttctacaaaataatattagaaagTATTCTGAAAATACGTATTTCATAACCAAAGGGGTGTTCGTTTTGTTTGAAAATCAGTGTCTATGAACTACGATAAAATGTGGTTGTATTGTTTAAACCTATGTGAAGGGTCCGTCCTTTTCTATTTCAGATTCATACTGTTTCTTTATAAATCAtgccatttttatataaaaaaatgatacagtGAAAA
>XM_043258171.1
GATAAGAGGGCAGTCCTAACTGTGTCTTGAAAAGCAGGTTAGAAATAGAAAACAGGGTCTCATTTTTCCCTTGGGATTGCAGACAGAGGTTGAAATCCTGCCCACCGTAATACATAGACACTTTGGATCTAACCATAGTCCTCACTCCCGTGTCTAATGGCAGACGATGACACGGTAAGACTGCAGAGTGAAAGCTTTTATTCAAcctgaaGGACCCTCCTCCACCATACTACTCTGTGGCAGGGGACCCACAGACGCCTCCTATGACCTACGAGGAGGTAATTCTTCAGGACCAATATGGGTTCACACAGAAACCTGTGCCAGTCTATGTTCCGATGGATCCACCGCCAGTACAGGTAGACGCCGTCATCATCACCACACAGCATGTTGTTGTTCCTTCAAAAAGGCAGAAGTCTTGCGGACGGAGTGCCAAGTGTTGGGGTGGATGTGTAGGTGCGCTGCTGGTGTTGGCTCTCATTGGACTGGCCATCTGGCTTGGAGTACGTTACGGATCCAAGTCGTATTCTGGAAATTATGAGAATGACTGCAAGGGACAAGATTGCAAAGAACAGGAACAGGGCAGTGACTGCAAGGGAAATGACTGCAACGAACAAGAACACGGCAGCGATTGCAAGGGAAAAGACTGCAACGAACAAGGGCACAAGACTGAAGATGGCACGAGTGTACCTGACGCCTGCTCCAACTCCTCCAAGCAGTGTGACGGCGTCCAAAACTGCCAGCAGGCCGCTGATGAGACGAACTGCGTGAGATTTGCAGAAGGTGGAGTGCTGCAGGTCAGAACTGCTCAGGATGGTCGATTCCTTCCAGTGTGTTATCAGGGATTGGATCAGGGTTATGCTGACCAGATCTGTGAACAGATGGGCTTTAGAAGGTCTTATGCATCAAATCCAGTGGATAGCAAGACGTCTGTAGCCCTTACTGTAGGAAAGAGATCAGCTAAACTAATACAGGGTCTGGTAAATGTCAGTTCGGGATGTCAGGATGAGAAAGCAGTCTCGCTTGAATGTACAGactgTGGCAAGCAGCAAACTGCCTCCAGGATCATAGGGGGCAGTGCCTCTCAAATTGGCCAGTGGCCTTGGCAGGTTAGCTTGCATTATGGTGGAAGCCATGTTTGTGGTGGATCACTCGTCGCTCCAGACTTTGTTGTGTCAGCTGCCCATTGCTTCCAAGGCGCAATGAAAAATTCGGCAAATTGGCGTGTCTATGTTGGAACTATTTCCCAGAGTGCCCTTCAGATCCCTTACCTCGTGACGAAGATTATAGTGAATGAGAACtacagcagcaacaacaacgatTATGATGTTACCTTACTGAAACTCAGCAGTCCTGTCACTTTCTCCAGCATTGTGCAGCCAGTTTGCTTTCCTACATTTGACCAAACCTTTTCTGATGGATCAGAGTGCTTGACATCTGGCTTTGGGACGACACAAGAGGGATCAGCCCATGCCTCTACAATCCTCATGGACGTGAAAGTGAATATCATCAACACTCAACTGTGTAACAGCAGTCAGGTGTACCGCGGGGCCATCACCAAGAATATGATATGCGCGGGTGATATGAACGGGGGCCGGGACTCCTGTCAGGGGGACAGCGGAGGTCCGCTGGTGTGCAAGAGGGATGATGACCGCTGGTATCTGGTTGGAATTACGAGCTGGGGAGCTGGATGCGGACAAAGACAAAGACCCGGAGTTTATAGCAGAGTGACCAGCCTCCTGCCCTGGATCTACAGCAAGATGCAGCAAGAGAAGCCCTGATGTCTCTCTTCGGTACGACGTGTCCCGAGGACAACAGTGGACAGAGAAAAAGATGAAGGACAGAGCGATGCACTTTGACATGGGATAATGTTGCAATATTTGTAGCCGTaattggaaaaaagaaaacagactttATTCATCCCGCATTCTCAAgtaagaaaacaataaaacaactgaACCTGGGAGAGCAGAGCTGCAGGCGTCGAGGACCTCGGGGTCCCCTTCTGTCGCTGTGCTTTCCTTATTCTCTTCTTCGCATTTTTACTGTAAGTTCAGGGCACAGCTGCTGAATCTGAGCCTTTGTCGCCTCTTTGTATTGGTATCTTTTCTTCGGTACTATCCTTGCACTGAttctacaaaataatattagaaagTATTCTGAAAATACGTATTTCATAACCAAAGGGGTGTTCGTTTTGTTTGAAAATCAGTGTCTATGAACTACGATAAAATGTGGTTGTATTGTTTAAACCTATGTGAAGGGTCCGTCCTTTTCTATTTCAGATTCATACTGTTTCTTTATAAATCAtgccatttttatataaaaaaatgatacagtGAAAA

Function

NR:

description
PREDICTED: transmembrane protease serine 13-like

GO:

id name namespace
GO:0008236 serine-type peptidase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043258170.1 False 2307 mRNA 0.48 13 2048643 2060046
XM_043258171.1 True 2342 mRNA 0.47 13 2048643 2060046

Neighbor

gene id symbol gene type direction distance location
fxyd6 LOC107699233,LOC107752282,LOC107561492,LOC107574918,LOC107699187,LOC107728170 coding downstream 406 2029622 ~ 2048237 (-)
LOC122359198 dscaml1,LOC107752281,LOC107728164,LOC107699210 coding downstream 34730 1906854 ~ 2013913 (-)
si:dkey-202l22.6 LOC107752287,LOC107699209,LOC107566080 coding downstream 152368 1889683 ~ 1896275 (-)
si:dkey-202l22.3 si:dkey-202l22.3,LOC107566085,LOC107752291,LOC107699219,LOC107699177,LOC107592664,LOC107728162 coding downstream 166135 1878215 ~ 1882508 (-)
LOC122358522 fkrp,LOC107699218,LOC107752280,LOC107566082,LOC107592673,LOC107728156,LOC107699175 coding downstream 241159 1801988 ~ 1807484 (-)
scn4ba scn4ba,LOC107564054,LOC107699188,LOC107728166,LOC107699235,LOC107561493,LOC107752283 coding upstream 43793 2103839 ~ 2133148 (-)
zgc:172282 zgc:172282,LOC107697541,LOC107758157,LOC107749639,LOC107678250,LOC107555640,LOC108433964 coding upstream 229785 2289831 ~ 2386870 (-)
LOC122359190 cog6,LOC107670561,LOC107699813 coding upstream 980979 3041025 ~ 3099945 (-)
LOC122358542 LOC107740375,LOC107593464,LOC107670538,LOC107726642,LOC107561479,LOC107699815 coding upstream 1318111 3378157 ~ 3410866 (-)
mtus2b LOC107670531,LOC107593466,LOC107561476,LOC107699816,LOC107726712,LOC107740389,LOC107740390 coding upstream 1364896 3424942 ~ 3462391 (-)
G103147 NA non-coding downstream 19476 2023242 ~ 2029167 (-)
G103140 LOC107752290,LOC107699229,LOC107728157,LOC107566086,LOC107592665,LOC107699176 non-coding downstream 178294 1867855 ~ 1870349 (-)
G103129 NA non-coding downstream 203648 1843412 ~ 1844995 (-)
G103090 NA non-coding downstream 222626 1780318 ~ 1826017 (-)
G103114 NA non-coding downstream 304170 1741721 ~ 1744473 (-)
LOC122359217 NA non-coding upstream 20026 2080072 ~ 2083265 (-)
G103155 NA non-coding upstream 41491 2101537 ~ 2133846 (-)
G103196 NA non-coding upstream 401378 2461424 ~ 2462404 (-)
G103208 NA non-coding upstream 533402 2593448 ~ 2594442 (-)
G103214 lpar6a,LOC107593460,LOC107701423,LOC107708689,LOC107598790,LOC107674900,LOC107713545 non-coding upstream 644107 2704153 ~ 2705023 (-)
G103130 prkd2,LOC107699186,LOC107728165,LOC107699228,LOC107566079 other downstream 203149 1844999 ~ 1845494 (-)
G103094 slc1a5,LOC107752279,LOC107699227,LOC107699184,LOC107566078,LOC107592660 other downstream 220343 1777020 ~ 1828300 (-)
LOC122359153 lrrc7,LOC107709201,LOC107659039,LOC107692363,LOC107739104 other downstream 1898052 98628 ~ 150591 (-)
scn2b scn2b,LOC107752284,LOC107699236,LOC107564053,LOC107699190,LOC107561494,LOC107728168 other upstream 78521 2138567 ~ 2161269 (-)
G103183 NA other upstream 147301 2207347 ~ 2291926 (-)
LOC122359207 nicn1,LOC107691891,LOC107564394,LOC107708487,LOC107678153 other upstream 613755 2673801 ~ 2675825 (-)
nek3 nek3,LOC107598788,LOC107598810 other upstream 659836 2719882 ~ 2746124 (-)
LOC122359209 lhfp,LOC107593461,LOC107740377,LOC107691645,LOC107751385,LOC107577306,LOC108426961,LOC107670626 other upstream 695973 2756019 ~ 2870153 (-)

Expression


Co-expression Network