LOC122359511


Basic Information

Item Value
gene id LOC122359511
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056713.1
NCBI id CM032082.1
chromosome length 23709629
location 1767053 ~ 1768071 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043259842.1
TTATCCTCAACGAAGATCACGGCGGGGTTTGCttttgagattaaataaaaaacataaggACCAAACTGGTTTCAGCAGCAACATCAAATGGGAAAAAACCAAGACGGCGAATATGTTTTCTGTTACCATGACAGGCATTCCAGAAAAAGAATATTACATTGGAATAGATAAAGAATGTAAGCCTTGCTTAGTTGACATGTTAACTATGACGTGTGTAACATCTTCTCAAACAGCTGAAAGGTTTCTTGTGAATCCAGATGAATTTGAAAATCTTGAATGGAAgaaaattgaatttttaaaatcgCTACTTTTCCCAGTTGAGACCTGCAAAGGATTGATTATCGCtcgaaataaaaatgacttaggttacattaaagcaaacattttaaaatcttttggaAGCTATGACGAATTCCTTTCCCTGAACCATGGTGATATTAAAGAGGAATACCTGtcaaatattgaatttaatgttacattacttcacagaaataaaaaaccAGACTTATTTCGGAATTTAACCATTGTTAACAACAACTGTGAAGTAATGAAACAGCAGGTGAAGATAGACAATAACTTTGAAGAAACATCTACTTATGAAGTCGGTAACACTTTGCTAATTGGAGGGTCAGTTGGATTTAAAATTCTAGATATAGATTTGGGTCTAAAGGTAGAACATACTTCCACTGAAACcgaaactaaatcaaatattaagaaaaatgatTACGGGTACGTTCAGGATTTAGAAATCCCACGCCTCAGTTCTTGTACTTTAGTAATAAACAGCAACGTCCTTGTAACCAGTGTCCCATTTACCGCTGACCTCACTAGAGTATTCAACAACTACGAGACACGCACAACCTCGATCAGCGGCAATTACACTTACGAGAAGTCAGCAGAAGTTAAAACAAACTTCGAGAACTGTGTCAAGCTTCATGGTGAATGTAAACCTTAACAATTTCTGTAATGCAAAATGAATCTGTCATACCTGTCAGAGTTCCTGAAAAATCACCATTAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043259842.1 True 1019 mRNA 0.35 1 1767053 1768071

Neighbor

gene id symbol gene type direction distance location
cadm2b cadm2b,LOC107555276,LOC107724967,LOC107699225,LOC107592658,LOC107699843 coding downstream 188916 1382872 ~ 1578137 (-)
mipepa mipep,LOC107724959 coding downstream 399456 1348293 ~ 1367597 (-)
egln2 LOC107699221,LOC107724964,LOC107699839,LOC107745877,LOC107555273 coding downstream 450503 1296554 ~ 1316550 (-)
tmem160 tmem160,LOC107699215,LOC107699801,LOC107724946,LOC107726505 coding downstream 474090 1290803 ~ 1292963 (-)
ap2s1 ap2s1 coding downstream 625378 1134145 ~ 1141675 (-)
LOC122358522 fkrp,LOC107699218,LOC107752280,LOC107566082,LOC107592673,LOC107728156,LOC107699175 coding upstream 33917 1801988 ~ 1807484 (-)
si:dkey-202l22.3 si:dkey-202l22.3,LOC107566085,LOC107752291,LOC107699219,LOC107699177,LOC107592664,LOC107728162 coding upstream 110144 1878215 ~ 1882508 (-)
si:dkey-202l22.6 LOC107752287,LOC107699209,LOC107566080 coding upstream 121612 1889683 ~ 1896275 (-)
LOC122359198 dscaml1,LOC107752281,LOC107728164,LOC107699210 coding upstream 138783 1906854 ~ 2013913 (-)
fxyd6 LOC107699233,LOC107752282,LOC107561492,LOC107574918,LOC107699187,LOC107728170 coding upstream 261551 2029622 ~ 2048237 (-)
G103114 NA non-coding downstream 22580 1741721 ~ 1744473 (-)
G103080 NA non-coding downstream 140320 1622684 ~ 1626733 (-)
G103003 NA non-coding downstream 281819 1481657 ~ 1485234 (-)
G103000 NA non-coding downstream 362193 1348194 ~ 1404860 (-)
G102970 NA non-coding downstream 476913 1289464 ~ 1290140 (-)
G103090 NA non-coding upstream 12247 1780318 ~ 1826017 (-)
G103129 NA non-coding upstream 75341 1843412 ~ 1844995 (-)
G103140 LOC107752290,LOC107699229,LOC107728157,LOC107566086,LOC107592665,LOC107699176 non-coding upstream 99784 1867855 ~ 1870349 (-)
G103147 NA non-coding upstream 255171 2023242 ~ 2029167 (-)
LOC122359217 NA non-coding upstream 312001 2080072 ~ 2083265 (-)
LOC122359153 lrrc7,LOC107709201,LOC107659039,LOC107692363,LOC107739104 other downstream 1616462 98628 ~ 150591 (-)
G103094 slc1a5,LOC107752279,LOC107699227,LOC107699184,LOC107566078,LOC107592660 other upstream 8949 1777020 ~ 1828300 (-)
G103130 prkd2,LOC107699186,LOC107728165,LOC107699228,LOC107566079 other upstream 76928 1844999 ~ 1845494 (-)
scn2b scn2b,LOC107752284,LOC107699236,LOC107564053,LOC107699190,LOC107561494,LOC107728168 other upstream 370496 2138567 ~ 2161269 (-)
G103183 NA other upstream 439276 2207347 ~ 2291926 (-)
LOC122359207 nicn1,LOC107691891,LOC107564394,LOC107708487,LOC107678153 other upstream 905730 2673801 ~ 2675825 (-)

Expression


Co-expression Network