LOC122358585


Basic Information

Item Value
gene id LOC122358585
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056713.1
NCBI id CM032082.1
chromosome length 23709629
location 5947053 ~ 5948262 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XR_006252634.1
CTGTCTTCGAAACATGCTCTCCACTCCTCTTCAGgaaAGGAATAGTTAAAGGTGAAGTATGGAGGTGCTTGTCATGCCGCTTCATAAACAAACAGACACTGATGTGGTTTCGAGTCGTGTTGAGCGAATGCTGGAGTCTGTTTGGGCTGCCCCAGGaagtaagtgtgtgttttcctcCTGTTGTCTTGGCCCATGCATagcagtgttttctttgtgaTGTCTTCCGTTATGCACTTGCATTTATCTGTCTGCATCATGCATTTGTGTATGCtgagtgtgcgtgcgtgtgtggtTTATGATATAGCAAACACATAGGGCtcaatatctgtgtgtgtgtgtgtgtgtgtgtgtgtgtcccggGCTGCTGCTCAGCTGTATTCTAATGTGGCTTTGCTCATTGTTGCTGTAAAGAGCGTGTGGCACTGAGGCATTCCTGTGCTGAGGCCTCGCACAAAACCCCTTCAGACTGCAGCCAGTCCTGCTGCTGTACGCTCACCATCTGGAGCAGATTGGGAGGATTCATAGAGACATTCTGACACTTTCTTACCTTTCAGAAGGAAACGCTTAAAGTCGGT

Function

GO: NA

KEGG:

id description
ko03030 DNA replication
ko04110 Cell cycle

RNA

RNA id representative length rna type GC content exon number start site end site
XR_006252634.1 True 575 lncRNA 0.48 3 5947053 5948262

Neighbor

gene id symbol gene type direction distance location
atp1b3b atp1b3b,LOC107704304,LOC107680094,LOC107720962,LOC107563006 coding downstream 22599 5903705 ~ 5924454 (-)
ece2b ece2,ece2b,LOC107680093,LOC107704303,LOC107561301,LOC107563005 coding downstream 59539 5842812 ~ 5887514 (-)
ano7 ano7,si:dkey-83h2.5,LOC107562997,LOC107720951 coding downstream 108209 5819657 ~ 5838844 (-)
rnf168 LOC107720953,LOC107680097,LOC107561299,LOC107704301,LOC107736206 coding downstream 127986 5813378 ~ 5819067 (-)
LOC122359514 LOC107720955,LOC107561294,LOC107555001,LOC107714090,LOC107744053 coding downstream 172340 5772609 ~ 5774713 (-)
rffl LOC107720964,LOC107744027,LOC107704306 coding upstream 18692 5966954 ~ 5984256 (-)
eif4h eif4h,LOC107704308,LOC107744028 coding upstream 38273 5986535 ~ 5996930 (-)
lipt2 lipt2,LOC107677087,LOC107684031,LOC107720748 coding upstream 214492 6162754 ~ 6164699 (-)
LOC122359410 abcg1,LOC107684024,LOC107561305,LOC107723828,LOC108426925,LOC107755138,LOC107677096,LOC108277612 coding upstream 294659 6242921 ~ 6255555 (-)
zmp:0000001236 maml2,LOC107598561,LOC107744020,LOC107714095,LOC107555004 coding upstream 401224 6349486 ~ 6394220 (-)
G103915 NA non-coding downstream 123998 5822518 ~ 5823055 (-)
G103895 NA non-coding downstream 169048 5750972 ~ 5778005 (-)
LOC122358398 NA non-coding downstream 187100 5759503 ~ 5759953 (-)
G103889 NA non-coding downstream 299477 5639655 ~ 5647576 (-)
G103888 NA non-coding downstream 300036 5639380 ~ 5647017 (-)
G104007 NA non-coding upstream 171603 6119865 ~ 6120140 (-)
G104009 NA non-coding upstream 173352 6121614 ~ 6121921 (-)
G104010 rnf169,LOC107684027,LOC107755140,LOC107677086,LOC107726617,LOC107567382 non-coding upstream 221206 6169468 ~ 6173454 (-)
G104015 spcs2,LOC107677086,LOC107567375 non-coding upstream 227337 6175599 ~ 6177242 (-)
G104019 NA non-coding upstream 231162 6179424 ~ 6180800 (-)
LOC122359408 LOC107744036,LOC107704290,LOC107562996,LOC107680065 other downstream 145972 5794803 ~ 5801081 (-)
pgm2l1 pgm2l1,LOC107684026,LOC107677044,LOC107569072 other downstream 197302 5737456 ~ 5749751 (-)
G103825 NA other downstream 508106 5438048 ~ 5438947 (-)
LOC122359119 NA other downstream 1237973 4707814 ~ 4709080 (-)
pcp4b NA other downstream 1374054 4506356 ~ 4572999 (-)
G104011 NA other upstream 197911 6146173 ~ 6146517 (-)
mmp28 mmp28 other upstream 1162994 7111256 ~ 7119286 (-)
G104603 LOC107703035,LOC107750119,LOC107551239 other upstream 1621584 7569846 ~ 7572090 (-)
G104628 NA other upstream 1691382 7639644 ~ 7640339 (-)
G104695 LOC107750114,LOC107701289,LOC107702996,LOC107720420,LOC107570341 other upstream 2009574 7957836 ~ 7958231 (-)

Expression


Co-expression Network