G113850


Basic Information

Item Value
gene id G113850
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056714.1
NCBI id CM032083.1
chromosome length 28146790
location 17752760 ~ 17753788 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU168112
attttcaatttattttaaatgctattgCTGCAGACATAAAATGACTATTTGTGTCTGAAGACAGAACACTTgctcttcatttcatttttttattactaggtgtatttatcttttattacttttaggTGTGTATTGTTAGCTGTAAATCTGATTTTTCAAAAAGAATATTCAATTGCATTAAATGCTGTTAGGTCAGCAAATCccagaataaatattttggtcacactttattttaaggttcaattctcactattaacattTGCCTGTTACCAATATTTTTATGTCAAGCAACAGGAAATTACTATATATAggtataaatgaatgaaaaaatctgaaaccgttaagaaatgtttcaaatgtttcatagctacaacaaaaaaaggcaCGTTTGGAAGTCCTTTTGAACAGCCTACCTGTAACATGGCCACAGACCGAGGCGTTGGAGTGGTCAAGGGTCTGAACAAGGGTTCTGATTTTAGggagaatataaaaatatgagtGTACTGCAAAAGGAAACAACGATGCATTATTGCGTTGGGATATTTGTGAGCCCATATGTACCCAGTGCTAAAGTTGTAGTCTGGTGGGATTGCAGTACATTTCTTCTTGGACACGTCCCACGCACAATATGGATCTCGTGAAAGGATGCATTCCTGGCAGCTGGCTCCGTAGCGACCGCAGTCAGCGAGAGGGATGCGCTGCACCTCAAGCTCTGTGCCAATGTAGAGATGACCCTTTTTTAGAATCAATGGCCATGTTGATGACGGGACTATCATCATGAAATAAAGAGTACTGTGCTATGATAAAGGCTCCTTCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU168112 True 817 lncRNA 0.37 2 17752760 17753788

Neighbor

gene id symbol gene type direction distance location
hapln2 hapln2,LOC107663449,LOC107717805 coding upstream 42841 17706602 ~ 17709919 (+)
nes LOC107689863,LOC107549237,LOC107741763,LOC107717781,LOC107597975,LOC107663107 coding upstream 165216 17581031 ~ 17587544 (+)
gpatch4 gpatch4,LOC107668491 coding upstream 175834 17573494 ~ 17576926 (+)
gon4lb LOC107741764,LOC107549236,LOC107689862,LOC107668496,LOC107717780,LOC107597969 coding upstream 179376 17558607 ~ 17573384 (+)
npr1b npr1b,LOC107741766,LOC107689868,LOC107717786,LOC107681586,LOC103022666,LOC108436575,LOC106605459,LOC106580330 coding upstream 196946 17526069 ~ 17555814 (+)
ctsk ctsk,LOC107689854,LOC107587836,LOC107741754,LOC107717769,LOC107663458 coding downstream 27609 17781397 ~ 17785320 (+)
ctss2.1 LOC107689850,LOC107663319,LOC107663331,LOC107587832,LOC107597985,LOC107741752,LOC107597987 coding downstream 33640 17787428 ~ 17790894 (+)
LOC122359890 LOC107689850,LOC107663331,LOC107587832,LOC107597985,LOC107741752,LOC107597987,LOC107663319,LOC107587833 coding downstream 37568 17791356 ~ 17798673 (+)
LOC122359893 LOC107663319,LOC107587833,LOC107741753,LOC107689852,LOC107597987,LOC107597985,LOC107689850 coding downstream 47989 17801777 ~ 17805660 (+)
mcl1b LOC107587828,LOC107741748,LOC107689846,LOC107732475,LOC107597989,LOC107663357 coding downstream 94196 17847984 ~ 17850434 (+)
G113791 s100a1,LOC107598020,LOC107587912,LOC107717776,LOC107689908 non-coding upstream 13774 17649910 ~ 17738986 (+)
G113790 NA non-coding upstream 48011 17687840 ~ 17704749 (+)
G113795 NA non-coding upstream 57946 17692771 ~ 17694814 (+)
LOC122361056 NA non-coding upstream 82587 17656614 ~ 17670173 (+)
G113678 syt11b,LOC107689871,LOC107741769,LOC107549234,LOC107597967,LOC107681579 non-coding upstream 255058 17457213 ~ 17497702 (+)
G113851 NA non-coding downstream 466 17754254 ~ 17771924 (+)
G113882 NA non-coding downstream 137439 17891227 ~ 17891719 (+)
LOC122359994 NA non-coding downstream 139182 17892970 ~ 17933477 (+)
G113942 LOC107587908,LOC100536175,LOC103025787 non-coding downstream 380098 18133886 ~ 18136989 (+)
G113954 lmna,LOC107741735,LOC107587813,LOC107704890,LOC107598000,LOC107671682,LOC107723101 non-coding downstream 445462 18199250 ~ 18200429 (+)
mettl25b rrnad1,LOC107689858,LOC107549245,LOC107587879 other upstream 15278 17732604 ~ 17737482 (+)
acbd7 acbd7,LOC107549230,LOC107717797,LOC107681577,LOC108440763 other upstream 345564 17400284 ~ 17407196 (+)
stx17 stx17,LOC107706149,LOC107723570,LOC107593691,LOC107657726 other upstream 840879 16900668 ~ 16911881 (+)
sec61b sec61b,LOC107593687,LOC107723518,LOC107595994,LOC102796100 other upstream 928777 16767060 ~ 16823983 (+)
cblc cblc,LOC107699489,LOC107595708,LOC107714982,LOC107593659,LOC107723469,LOC107657700 other upstream 1440388 16302542 ~ 16312372 (+)
ensab ensab,LOC107587831,LOC107741750,LOC107663348,LOC107597988,LOC107732479,LOC107689847,LOC108441925,LOC108268136 other downstream 88014 17841802 ~ 17847410 (+)
G114131 NA other downstream 894757 18648545 ~ 18857430 (+)
LOC122360853 LOC107700173,LOC107717447,LOC107551678,LOC107723400,LOC107582047,LOC107671182 other downstream 921772 18675560 ~ 18680093 (+)
LOC122359904 psma2,si:rp71-45k5.4,LOC108440756,LOC103045926,LOC107686300,LOC107592434,LOC107714337,LOC107724313,LOC103023870,LOC108425697,LOC107653859,LOC107556413 other downstream 1004517 18758305 ~ 18761771 (+)
LOC122360692 NA other downstream 1054956 18808744 ~ 18821136 (+)

Expression


Co-expression Network