G114172


Basic Information

Item Value
gene id G114172
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056714.1
NCBI id CM032083.1
chromosome length 28146790
location 18663828 ~ 18664762 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU168546
AGGAACACAAGGAGGAATGCTGTCATTGTTGTCATCCGCTGTCCATCTCTGGTCTTCTGTACAAGTATATCttactacCATTAGGGGTTCCTTCAAATGTGTAGAATGGCTCATTGCAGTAATACTCAATGACTGATCCATTGATAAACCGAACACCTCCATTTAACAGGGGTTTTGGAGCTCCACAGCCAGTAGCCTGGTAGGATGCAATAAATCCTGTGTGTGATTTAGGGTTTGAATCATCAGTTAGAAAAAAGAGCTGGAGACGGTTACCAGGTACAACGATGGGTTTGTCTCCTGGGTGGAACCTGTCTGTAGAACTCTGGCCACAAAACTTCCCCAGAACCTTCTTTTCCGACACAAGCTAAATGCAAAACA
>TU168547
TAATTGTGAAATCATATGAATGAAAATCAGTTTTGCATAGTATCTTACCATTAGGGGTTCCTTCAAATGTGTAGAATGGCTCATTGCAGTAATACTCAATGACTGATCCATTGATAAACCGAACACCTCCATTTAACAGGGGTTTTGGAGCTCCACAGCCAGTAGCCTGGTAGGATGCAATAAATCCTGTGTGTGATTTAGGGTTTGAATCATCAGTTAGAAAAAAGAGCTGGAGACGGTTACCAGGTACAACGATGGGTTTGTCTCCTGGGTGGAACCTGTCTGTAGAACTCTGGCCACAAAACTTCCCCAGAACCTTCTTTTCCGACACAAGCTAAATGCAAAACA

Function

GO:

id name namespace
GO:0019222 regulation of metabolic process biological_process
GO:0080090 regulation of primary metabolic process biological_process
GO:0051171 regulation of nitrogen compound metabolic process biological_process
GO:0019538 protein metabolic process biological_process
GO:0030162 regulation of proteolysis biological_process
GO:0051246 regulation of protein metabolic process biological_process
GO:0006508 proteolysis biological_process
GO:0060255 regulation of macromolecule metabolic process biological_process
GO:0005579 membrane attack complex cellular_component
GO:0046930 pore complex cellular_component

KEGG:

id description
ko04610 Complement and coagulation cascades
ko05150 Staphylococcus aureus infection
ko05322 Systemic lupus erythematosus

RNA

RNA id representative length rna type GC content exon number start site end site
TU168546 True 378 lncRNA 0.44 3 18663828 18664762
TU168547 False 348 lncRNA 0.42 2 18663973 18664762

Neighbor

gene id symbol gene type direction distance location
LOC122360632 LOC107672171,LOC107552811,LOC107724789 coding upstream 51356 18608982 ~ 18612472 (+)
ndrg1b ndrg1b coding upstream 67004 18592268 ~ 18596824 (+)
scxb scxb,LOC107714619,LOC107704851,LOC107724780,LOC107672140,LOC107552813,LOC107576100 coding upstream 121191 18539263 ~ 18542637 (+)
fam210ab fam210ab,LOC107587812,LOC107704893,LOC107741733,LOC107723107,LOC107671697,LOC107598002 coding upstream 424503 18232044 ~ 18239325 (+)
mc2r LOC107704892,LOC107741732,LOC107587907,LOC107598023,LOC107723103,LOC107672129 coding upstream 441892 18221031 ~ 18221936 (+)
LOC122360004 fkbp14,LOC107596753,LOC107743226,LOC107685615,LOC107550815,LOC107745381 coding downstream 7197 18671959 ~ 18673711 (+)
LOC122360773 LOC107666789,LOC107600495,LOC107705096 coding downstream 18557 18683319 ~ 18684515 (+)
LOC122360227 LOC107592439,LOC107714343,LOC107666800,LOC107719142 coding downstream 39641 18704403 ~ 18751686 (+)
LOC122361002 atad2,LOC107719139,LOC107666826,LOC107686264,LOC107714334 coding downstream 97502 18762264 ~ 18779383 (+)
LOC122360014 apoa2,LOC107728486,LOC107688286,LOC107726689,LOC107592191,LOC107726687,LOC107671415 coding downstream 317327 18982089 ~ 18983105 (+)
LOC122360728 NA non-coding upstream 10223 18650773 ~ 18653605 (+)
G114106 NA non-coding upstream 41422 18516618 ~ 18622406 (+)
G114104 NA non-coding upstream 101917 18561280 ~ 18561911 (+)
G114103 NA non-coding upstream 102859 18560214 ~ 18560969 (+)
G113988 NA non-coding upstream 286187 18320745 ~ 18377641 (+)
G114175 NA non-coding downstream 3083 18667845 ~ 18669187 (+)
G114132 NA non-coding downstream 101856 18766618 ~ 18888286 (+)
LOC122360693 NA non-coding downstream 156755 18821517 ~ 18825388 (+)
G114299 NA non-coding downstream 312789 18977551 ~ 18979872 (+)
G114316 syngap1b,LOC107592176,LOC107688248,LOC107592452 non-coding downstream 403840 19068602 ~ 19112727 (+)
ensab ensab,LOC107587831,LOC107741750,LOC107663348,LOC107597988,LOC107732479,LOC107689847,LOC108441925,LOC108268136 other upstream 816418 17841802 ~ 17847410 (+)
mettl25b rrnad1,LOC107689858,LOC107549245,LOC107587879 other upstream 926346 17732604 ~ 17737482 (+)
acbd7 acbd7,LOC107549230,LOC107717797,LOC107681577,LOC108440763 other upstream 1256632 17400284 ~ 17407196 (+)
stx17 stx17,LOC107706149,LOC107723570,LOC107593691,LOC107657726 other upstream 1751947 16900668 ~ 16911881 (+)
sec61b sec61b,LOC107593687,LOC107723518,LOC107595994,LOC102796100 other upstream 1839845 16767060 ~ 16823983 (+)
LOC122360853 LOC107700173,LOC107717447,LOC107551678,LOC107723400,LOC107582047,LOC107671182 other downstream 10798 18675560 ~ 18680093 (+)
LOC122359904 psma2,si:rp71-45k5.4,LOC108440756,LOC103045926,LOC107686300,LOC107592434,LOC107714337,LOC107724313,LOC103023870,LOC108425697,LOC107653859,LOC107556413 other downstream 93543 18758305 ~ 18761771 (+)
LOC122360692 NA other downstream 143982 18808744 ~ 18821136 (+)
LOC122360132 NA other downstream 162492 18827254 ~ 18841584 (+)
G114352 LOC107726675,LOC107592148,LOC107665654,LOC107592451,LOC107728449 other downstream 533042 19197804 ~ 19253046 (+)

Expression


Co-expression Network