G114299


Basic Information

Item Value
gene id G114299
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056714.1
NCBI id CM032083.1
chromosome length 28146790
location 18977551 ~ 18979872 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU168743
TTATTGGAAATATACAAATCACTACTCATAACAGGTTTCAACGTATGAATTACATGGCATTTAAGTGTACTGCCactttgtacaaaaaaaaaaaaaaaaaaggtacataaATCTGCAGTGTAAACACCGTCAGCTTCAACATGTATGCTTCGGCAGCATCTGCCATTCTTTAACAAAAGACCTTCAGACAGTTGCAAATAACTAACAATTAAGACACCCCCtctcaaaagcactaaaatcGTCAATTTaaagagatacacacacagacactccaATCTGACTCCAAACTGTCTTGAAAAACAATGCCGCCTGGCTGGGAAACAGACACTGGAGTCATGAACTGGGGAAAAATCAACGTCGCCGCCTGTCAGGGCTCCTGCTGCGTCTTCTCCCGCCCCCTCTTGCTCTTAGGAGGTCCTCTTACAAAGCACCAGTCAACGCTGATAGGTTGCCCCATCAGTTCCTGGCCATTCAGCCCTTCCATCGCTGCCTGGGCTTCTTTATAGGTCTCGTACTCCACCAGCGCATAGCCCTAAGGTAACCGGTTCTCCTGTCCAAATTTAAATGCAGGTTTTTAATCTCTCCGTATTCTGCAAACTTATCGTGGACGTCCTCTTCCGTCGCCTCCTCATGCACACCAGTCACAAAAAGAATCCATCCTTCAACGGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU168743 True 669 lncRNA 0.45 3 18977551 18979872

Neighbor

gene id symbol gene type direction distance location
LOC122361002 atad2,LOC107719139,LOC107666826,LOC107686264,LOC107714334 coding upstream 198168 18762264 ~ 18779383 (+)
LOC122360227 LOC107592439,LOC107714343,LOC107666800,LOC107719142 coding upstream 225865 18704403 ~ 18751686 (+)
LOC122360773 LOC107666789,LOC107600495,LOC107705096 coding upstream 293036 18683319 ~ 18684515 (+)
LOC122360004 fkbp14,LOC107596753,LOC107743226,LOC107685615,LOC107550815,LOC107745381 coding upstream 303840 18671959 ~ 18673711 (+)
LOC122360632 LOC107672171,LOC107552811,LOC107724789 coding upstream 365079 18608982 ~ 18612472 (+)
LOC122360014 apoa2,LOC107728486,LOC107688286,LOC107726689,LOC107592191,LOC107726687,LOC107671415 coding downstream 2217 18982089 ~ 18983105 (+)
LOC122360015 apoa2,LOC107592541,LOC107726689,LOC107688286,LOC107592191,LOC107728486,LOC107726687 coding downstream 5038 18984910 ~ 18986011 (+)
LOC122360019 ntrk1,LOC107728446,LOC107592455,LOC107688245,LOC107671431,LOC107592146 coding downstream 22679 19002551 ~ 19013239 (+)
ntrk1 ntrk1,LOC107688245,LOC107592455,LOC107592146,LOC107671431,LOC107728446 coding downstream 49194 19029066 ~ 19052616 (+)
rgl2 rgl2,LOC107666852,LOC107726673,LOC107665651 coding downstream 234614 19214486 ~ 19240639 (+)
G114132 NA non-coding upstream 89265 18766618 ~ 18888286 (+)
LOC122360693 NA non-coding upstream 152163 18821517 ~ 18825388 (+)
G114175 NA non-coding upstream 308364 18667845 ~ 18669187 (+)
G114172 NA non-coding upstream 312789 18663828 ~ 18664762 (+)
LOC122360728 NA non-coding upstream 323946 18650773 ~ 18653605 (+)
G114316 syngap1b,LOC107592176,LOC107688248,LOC107592452 non-coding downstream 88730 19068602 ~ 19112727 (+)
G114328 LOC107688248,LOC107665647,LOC107592452,LOC107592176 non-coding downstream 115858 19095730 ~ 19156067 (+)
G114354 NA non-coding downstream 222522 19202394 ~ 19205964 (+)
G114345 NA non-coding downstream 266061 19245933 ~ 19248320 (+)
G114379 NA non-coding downstream 328392 19308264 ~ 19309214 (+)
G114131 NA other upstream 120121 18648545 ~ 18857430 (+)
LOC122360132 NA other upstream 135967 18827254 ~ 18841584 (+)
LOC122360692 NA other upstream 156415 18808744 ~ 18821136 (+)
LOC122359904 psma2,si:rp71-45k5.4,LOC108440756,LOC103045926,LOC107686300,LOC107592434,LOC107714337,LOC107724313,LOC103023870,LOC108425697,LOC107653859,LOC107556413 other upstream 215780 18758305 ~ 18761771 (+)
LOC122360853 LOC107700173,LOC107717447,LOC107551678,LOC107723400,LOC107582047,LOC107671182 other upstream 297458 18675560 ~ 18680093 (+)
G114352 LOC107726675,LOC107592148,LOC107665654,LOC107592451,LOC107728449 other downstream 217932 19197804 ~ 19253046 (+)
fxyd11 NA other downstream 300511 19280383 ~ 19283515 (+)
fxyd3 fxyd1,plm,LOC107592153,LOC107728489,LOC107592449,LOC107665652,LOC105891849 other downstream 303889 19283761 ~ 19292881 (+)
G114382 NA other downstream 347232 19327104 ~ 19328763 (+)
LOC122360533 dcstamp,LOC107556953,LOC107592504 other downstream 663957 19643829 ~ 19647806 (+)

Expression


Co-expression Network