G114379


Basic Information

Item Value
gene id G114379
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056714.1
NCBI id CM032083.1
chromosome length 28146790
location 19308264 ~ 19309214 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU168842
CGAAACTGCAGTCCGATCAAGTCTAATTTAGTCTGATCTAATGACATCATTATCACATGGCAGAGCTGATTGGTTCTCTGCTGTATCGTTAGCCAATGAGCTCTCtgctcaacattcaaatatatgacTAGTGTTTGAAAATGGAATTCAATTAATTTGCTCcctgttcattaaaaaattctaaatcaaTTAAGAACCAAACACTTGTATGAACACAGTATGTTGctagatgaaaaaaataaaataaaatttataatagCATGCGTGAAATTGTCAGTTagacaaattaaacatttcgtTTCACAGTACAActttttaaacaggaaaaacctgtaattattttttgctgggttttttttgtttattaggcAGTCTTTTACTGCAGACAAAATTGTATTGATATCACATGCTGTCTGCAAATTGTGGTTTGAGGTTAAGgctcaagaaatgtttttgcaagAGGCGGGTTTAACCTCATAATGAGTAGTTCcgaaaaactatttaaaaaaaatcaaagcaaagAAAGTATGCCTTTGTTCATCTACAATACGCTCCTTCTTTGTTTTGGTTGtctacattttatatttttaattgttcagtTGTGTTTAAGTCTCTTTGAAaccatctgctaaatgcataattgAAAGTGAGCTCttttgaaagtgattttgtCACATTATGATGTCATATAGTGAAACAAAAGCCCACAGCACCATTTTAGATTCAGGGACGTAGTCTGCACTTACGAAAAAGAAGTTTTTTCAAGTGTGTTAATAATATACTTCTTTTAAATTTAACAGGAAATTATCATTTTAGTCTACTTTTAGGTATTTCCCAAAAGTATACTTACAATGACATTTAAGTATACTCAATTTATACTCaagtctaaatatatttaagctaTACTGTGCTTCtagaatcgttttttttttcaagattataAGGTAGGGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU168842 True 951 lncRNA 0.31 1 19308264 19309214

Neighbor

gene id symbol gene type direction distance location
LOC122360927 LOC107666765,LOC107728460 coding upstream 764 19305509 ~ 19307500 (+)
LOC122360453 NA coding upstream 11475 19293027 ~ 19296789 (+)
hpn hpn,si:dkey-33i11.3,LOC107728492,LOC107726693 coding upstream 34993 19262614 ~ 19273271 (+)
si:dkey-33i11.1 si:dkey-33i11.1,LOC107666767,LOC107726681,LOC107728459 coding upstream 48661 19251356 ~ 19259603 (+)
rgl2 rgl2,LOC107666852,LOC107726673,LOC107665651 coding upstream 67625 19214486 ~ 19240639 (+)
LOC122360047 LOC107666749,LOC107686570 coding downstream 158 19309372 ~ 19311747 (+)
LOC122360969 NA coding downstream 13817 19323031 ~ 19325543 (+)
LOC122360278 LOC107728464,LOC107666853,LOC107728467,LOC107666779,LOC107686805,LOC107592514,LOC107728451,LOC107666749 coding downstream 33125 19342339 ~ 19348454 (+)
LOC122360279 LOC107666755,LOC107728493 coding downstream 42892 19352106 ~ 19354160 (+)
gapdhs gapdhs,LOC107666830,LOC107577408,LOC107709572,LOC107686531,LOC107728487 coding downstream 61120 19370334 ~ 19382363 (+)
G114345 NA non-coding upstream 59944 19245933 ~ 19248320 (+)
G114354 NA non-coding upstream 102300 19202394 ~ 19205964 (+)
G114328 LOC107688248,LOC107665647,LOC107592452,LOC107592176 non-coding upstream 152197 19095730 ~ 19156067 (+)
G114316 syngap1b,LOC107592176,LOC107688248,LOC107592452 non-coding upstream 195537 19068602 ~ 19112727 (+)
G114299 NA non-coding upstream 328392 18977551 ~ 18979872 (+)
G114520 dpys,LOC107728457,LOC107686378,LOC107666745 non-coding downstream 338690 19647904 ~ 19648864 (+)
G114556 NA non-coding downstream 370169 19679383 ~ 19679686 (+)
G114558 NA non-coding downstream 372926 19682140 ~ 19682452 (+)
LOC122360931 NA non-coding downstream 393511 19702725 ~ 19719929 (+)
LOC122360959 NA non-coding downstream 700339 20009553 ~ 20010093 (+)
fxyd3 fxyd1,plm,LOC107592153,LOC107728489,LOC107592449,LOC107665652,LOC105891849 other upstream 15383 19283761 ~ 19292881 (+)
fxyd11 NA other upstream 24749 19280383 ~ 19283515 (+)
G114352 LOC107726675,LOC107592148,LOC107665654,LOC107592451,LOC107728449 other upstream 55218 19197804 ~ 19253046 (+)
G114131 NA other upstream 450834 18648545 ~ 18857430 (+)
LOC122360132 NA other upstream 466680 18827254 ~ 18841584 (+)
G114382 NA other downstream 17890 19327104 ~ 19328763 (+)
LOC122360533 dcstamp,LOC107556953,LOC107592504 other downstream 334615 19643829 ~ 19647806 (+)
hjv hfe2,LOC107719159,LOC107666758,LOC107714319,LOC107592274 other downstream 910430 20219644 ~ 20227077 (+)
slc4a7 slc4a7,LOC107666816,LOC107686077 other downstream 958327 20267541 ~ 20304684 (+)
siglec15l NA other downstream 1458064 20767278 ~ 20770392 (+)

Expression


Co-expression Network