LOC122360533 (dcstamp,LOC107556953,LOC107592504)


Basic Information

Item Value
gene id LOC122360533
gene name dcstamp,LOC107556953,LOC107592504
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056714.1
NCBI id CM032083.1
chromosome length 28146790
location 19643829 ~ 19647806 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU169046
gtaggtttagggataaatgcgtatcatatgcacgcaaACAAATTCAGTATCATATGTACGTGAAAACGTATTACATGCAACACgtgcgtatcatatgcacgccaaagtcattcttttaaaagtttttgtttttatttggcatactaTTTATACGTATTTTTTATTAGGGCTGTTTCAAATATCTTACTTTCTGTaggtttaaatgtataattaatacagaaattacaaacaaaaatcagTGGGGCCACAATGTTCTGTATCTTCTGTACCGTTTCAGAGGGTTATTTGTTGAAATTGTAATGTCAtctaattgttttcttttcttcttcgtTTTCAAAGGAGGCCACATTATTTCTAGGATTGCCTGTTGATGAAACTGCAAAAGGGGCAGACTTTTCCTACACAGTGTCAATGTTTGAGAAGAAGTGTTTGCCTGAACCCGAACTGTGGCTTTATCAGTCTCTGGTTCCCCTGTCTGTGGTCCTGGCCTCGCTGGTTGTTCTGATTCTTCTTTCATCACAGATGGTCCAGCTCAGAGTTGTGCTATCTGAGCAGTTTTTCTCAGATGTTGCAGAGGAACGAGCTGCCTATCTGCATGCAAAGATTTTAAGAAAGAGGTGCAAAACTAAAGCAGAAGAGCATGAAGGAGCTCTGAAGACTTTAGCCACGCAGcCCAGCTTTTGGTGTCCTTTACTCTTCCATAAACACAGGATGGACCCTGAGGCTGTTTAAATATGCTTGAAGTTAGCAAACACCAGTCAAGCAACCATAATTGCAGGTTTTACATGTCAACAACTCACACACTACTTTTTGGCAGAAAGCCTACCTTAGCATTGCATTGTATACAGAAAGGATGTGTCCTGTTTGTTATGAACTACTACATAGGGGGCAAGTGGATAATAGGCCATGGGTCCTTAGTGATCAGTTTGTGCTGTATGGACCACACCTTTTCCAAACTATTCATTTTACTCCTTCAGGGGTTAACAAACTTATATTGAGGTAAAAATGAGCAATGAGCACAGGCAGACGTTTAGACCTGTATGTTCAAAAAGTGTAGGGCTGGTAAGACTTTGTCAATGACGTTGAAAGTCCGCCTTCTTAcaggctatatttatttgattgcaaATACgctaaaaacagtaatattgtgaaatattattacagttttaaactttttaaaacttttctattttcatatttttttgtatattatgtaatttattattattattattatttaacctTTGCTAGTAAAGTTGCAATTTCAAGAAGAATTTATGATCACAGGTGGAAACAGTTATTTATACACACg
>XM_043261244.1
atatttttttttttttaaagcacattaatCATGAGGTGGTTTTTGTCAGTGTTGTTCTGTGGTTATGAGTAAGTGCTGAGATGATGGCTAAAAAGGAAGTGACCAACTAAGGGATAAAATCAGCTTCCtcttgttttactttaaaaagatGAACGCTGGACTGTCACAACACACTTGTGAGCTGACAAGACCGCTAACAAATAAGTGTGAGGATGGTGATTCAAGCTAAACTGCATCAACTGACAGAAGGACTACGGCGGGCCTGGTTCACAATATGTGGTCTGTACACGACCAACACCACAAAAAGCTGGAAGGAAAAACTTCTCCTCCTGTTGACGTGTTTTATCACCAGCCTCATTCTGAGCACCTTCCTCTTTCTCATCCTCCACTTTTCCTTCAAATGCTCTGAAGAGGTCACGCTACCCTTTTCTTGCGTTTTATGCATAAGCTTAACACCAGCCACGTATTTCTCCGAAAGGACTCGCTGTTTCGGGGCCTTGATTTTGATCTCAATGGGTATGAAACAAGTGAAGAGCATCCTTCTCACTTTAGGAACCAGTTCGGTAATTTTCTTCAACATCCAGAACACGTTGCGAAACTTGAGACTCCTCGCAAAAGCCCTCCTCTGCAACTTGGAGGAAAAGTTATTGGATATTAATACAGAACCCTTGgggaattatattaaaatgttgaaatgggTGGGAAAGCAacttaaaaattactttataaacTTTCGGTTGGTGAGTTACCACGCAGATTTCAAACTAAAAGCAAAGGTGGACTCGCGAGACTTCAAAACTCACCTCACCGAGGCCGAGCAGGCTTTAAACCAGACCGCGCAAAATGTGCTGGCGCTGACCAACGCTTTGTCTTCCTCAGGAAAGATATTGTCTCCAACGTTAGGCCTTTTAGTTCTCGTACTTCTCACTGCTCTGTACCTGAGAAGATTCCACGTGGACAAAAGGTACAACAACATATACATCACGAAAACCTTCCGTTGTTTTGACGAGCGGCAAAAGCAAAAGGGGAAACCGTGTGTCCTTCCGCTGACCGAAAGCGAGGCGGAACGTTACGTCGTGACTCCGTCCGTTCGTCCGACGGCTCGGCGGTGGAGAGCCACGCTCAAGTTCAGTCTTCCCATATTCACTCACTGTCTCACCTGGCTGGTGTTCATCAGTCTAGACACCCTGATTTACTGGCTTATTGTAGTTTTAAGCAAGCGACTCGGAGAACTGGAGCCGCTTCGTGTTCCAGTGGGAGTAAAAGTTCAGGAGGCCACATTATTTCTAGGATTGCCTGTTGATGAAACTGCAAAAGGGGCAGACTTTTCCTACACAGTGTCAATGTTTGAGAAGAAGTGTTTGCCTGAACCCGAACTGTGGCTTTATCAGTCTCTGGTTCCCCTGTCTGTGGTCCTGGCCTCGCTGGTTGTTCTGATTCTTCTTTCATCACAGATGGTCCAGCTCAGAGTTGTGCTATCTGAGCAGTTTTTCTCAGATGTTGCAGAGGAACGAGCTGCCTATCTGCATGCAAAGATTTTAAGAAAGAGGTGCAAAACTAAAGCAGAAGAGCATGAAGGAGCTCTGAAGACTTTAGCCACGCAGcCCAGCTTTTGGTGTCCTTTACTCTTCCATAAACACAGGATGGACCCTGAGGCTGTTTAAATATGCTTGAAGTTAGCAAACACCAGTCAAGCAACCATAATTGCAGGTTTTACATGTCAACAACTCACACACTAC

Function

symbol description
dcstamp Involved in cellular response to interleukin-4. Located in cell surface and endoplasmic reticulum membrane. Is integral component of endoplasmic reticulum membrane.

NR:

description
PREDICTED: dendritic cell-specific transmembrane protein

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU169046 False 1312 TUCP 0.37 2 19645958 19647806
XM_043261244.1 True 1739 mRNA 0.45 4 19643829 19647301

Neighbor

gene id symbol gene type direction distance location
rims2a rims2,rims2a,LOC107666746,LOC107728483,LOC108438094,LOC106919946,LOC106962152,LOC107556969,LOC107095553,LOC108256727 coding upstream 343 19499281 ~ 19643486 (+)
dcaf13 dcaf13 coding upstream 146102 19491155 ~ 19497727 (+)
LOC122360535 LOC107728462,LOC107666770,LOC107592443 coding upstream 156037 19483949 ~ 19487792 (+)
zmp:0000000951 LOC107592442,LOC107728471,LOC107666810,LOC107709755,LOC107556960,LOC107666812 coding upstream 159939 19480366 ~ 19483890 (+)
arhgap33 arhgap33,LOC107728480,LOC107666809,LOC107709693,LOC107686565 coding upstream 168731 19427483 ~ 19475098 (+)
zfpm2a zfpm2,zfpm2a,LOC107592441,LOC107719156,LOC107556951,LOC107666743,LOC107714317 coding downstream 78350 19726156 ~ 19865094 (+)
oxr1a oxr1a,LOC107592439,LOC107714343,LOC107666800,LOC107719142 coding downstream 249980 19897786 ~ 20012359 (+)
zmp:0000000930 zmp:0000000930,LOC107719165,LOC107666769,LOC107592532,LOC107686330,LOC107714340,LOC107556967 coding downstream 386326 20034132 ~ 20036138 (+)
psma2a psma2,si:rp71-45k5.4,LOC108440756,LOC103045926,LOC107686300,LOC107592434,LOC107714337,LOC107724313,LOC103023870,LOC108425697 coding downstream 393730 20041536 ~ 20044792 (+)
LOC122360280 atad2,LOC107719139,LOC107666826,LOC107686264,LOC107714334 coding downstream 397482 20045288 ~ 20055412 (+)
G114379 NA non-coding upstream 334615 19308264 ~ 19309214 (+)
G114345 NA non-coding upstream 395509 19245933 ~ 19248320 (+)
G114354 NA non-coding upstream 437865 19202394 ~ 19205964 (+)
G114328 LOC107688248,LOC107665647,LOC107592452,LOC107592176 non-coding upstream 487762 19095730 ~ 19156067 (+)
G114316 syngap1b,LOC107592176,LOC107688248,LOC107592452 non-coding upstream 531102 19068602 ~ 19112727 (+)
G114520 dpys,LOC107728457,LOC107686378,LOC107666745 non-coding downstream 98 19647904 ~ 19648864 (+)
G114556 NA non-coding downstream 31577 19679383 ~ 19679686 (+)
G114558 NA non-coding downstream 34334 19682140 ~ 19682452 (+)
LOC122360931 NA non-coding downstream 54919 19702725 ~ 19719929 (+)
LOC122360959 NA non-coding downstream 361747 20009553 ~ 20010093 (+)
G114382 NA other upstream 315066 19327104 ~ 19328763 (+)
fxyd3 fxyd1,plm,LOC107592153,LOC107728489,LOC107592449,LOC107665652,LOC105891849 other upstream 350948 19283761 ~ 19292881 (+)
fxyd11 NA other upstream 360314 19280383 ~ 19283515 (+)
G114352 LOC107726675,LOC107592148,LOC107665654,LOC107592451,LOC107728449 other upstream 390783 19197804 ~ 19253046 (+)
LOC122360132 NA other upstream 802245 18827254 ~ 18841584 (+)
hjv hfe2,LOC107719159,LOC107666758,LOC107714319,LOC107592274 other downstream 571838 20219644 ~ 20227077 (+)
slc4a7 slc4a7,LOC107666816,LOC107686077 other downstream 619735 20267541 ~ 20304684 (+)
siglec15l NA other downstream 1119472 20767278 ~ 20770392 (+)
tgfbr2b tgfbr2,LOC107730143,LOC107600517,LOC107551196,LOC107713826 other downstream 2202183 21849989 ~ 21872972 (+)
stt3b stt3b,LOC107668300,LOC107666808,LOC108434203,LOC107713794 other downstream 2236103 21883909 ~ 21921531 (+)

Expression


Co-expression Network