G115157


Basic Information

Item Value
gene id G115157
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056714.1
NCBI id CM032083.1
chromosome length 28146790
location 21828216 ~ 21829531 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU170026
AAGCGGAGTAACGACCTTCATAAAGGAGGGAAACCGAGAGTTGAGTGATTGACCAGGCCCTGGAAGGTTGACACATTCATCACGATGACAGCCGCTAGGTGTCTGGCTGAAAGGAGGACAGGACATCATCAATAGCTTTTCTTGCCTTTTATTGAAGAGTTTTCCAGGAGCTTTAGTGGGAATATCAcacagacagtttttttttctcttgtttccATTCCCCCTTTCAAGATATGACGAACTCCGCGGCAGACAGGTTGCCATGGCGTCAGTGCCACAACATCCATAAACAGAGGCAATGTGTAATGTGCTGAAGATCCCAGCGCAGCTCAGCTGGGCACTGCACCGGCTGCTGGAG

Function

GO:

id name namespace
GO:0060538 skeletal muscle organ development biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU170026 True 358 lncRNA 0.49 2 21828216 21829531

Neighbor

gene id symbol gene type direction distance location
rbms3 rbms3,LOC107730162,LOC107668303,LOC107713827,LOC108434201 coding upstream 5743 21703724 ~ 21822473 (+)
si:dkey-29b11.3 LOC107730210,LOC107600552,LOC107668293,LOC107713830,LOC107567766,LOC107668280 coding upstream 174157 21651508 ~ 21654059 (+)
LOC122360960 NA coding upstream 422392 21392842 ~ 21405824 (+)
plekhf2 plekhf2,LOC107666819,LOC107600513,LOC107668314,LOC107591926 coding upstream 449374 21365339 ~ 21378842 (+)
ndufaf6 ndufaf6,LOC107717382,LOC107591959 coding upstream 473600 21346657 ~ 21354616 (+)
gpd1l gpd1l,LOC107600618,LOC107705153,LOC107666803,LOC107551192,LOC107713825,LOC108434205,LOC103034694 coding downstream 132689 21962220 ~ 21968547 (+)
tmem42a si:dkey-99n20.7,LOC107705805,LOC107666806,LOC107600663 coding downstream 141691 21971222 ~ 21972500 (+)
ebag9 ebag9,LOC107666870,LOC107705161,LOC107600620,LOC107679646,LOC107713822,LOC107551191 coding downstream 154359 21983890 ~ 21989916 (+)
gdf6a gdf6a,LOC107705204,LOC107600621,LOC107666829,LOC107551190,LOC107679643,LOC107713806 coding downstream 174704 22004235 ~ 22010159 (+)
LOC122360094 tmem74,LOC107705834,LOC107666858,LOC107713801,LOC107679640,LOC107551181,LOC107579295 coding downstream 307037 22136568 ~ 22139827 (+)
G115134 NA non-coding upstream 133672 21693494 ~ 21694544 (+)
G115074 NA non-coding upstream 437054 21390781 ~ 21391162 (+)
G115020 gbp,LOC107666878,LOC107717378,LOC107600509,LOC107668283,LOC107713814 non-coding upstream 658863 21167994 ~ 21169353 (+)
G114983 NA non-coding upstream 686186 21141042 ~ 21142030 (+)
trnae-cuc_37 NA non-coding upstream 689264 21138881 ~ 21138952 (+)
G115200 NA non-coding downstream 167479 21997010 ~ 22001617 (+)
G115288 NA non-coding downstream 697626 22527157 ~ 22530262 (+)
G115342 NA non-coding downstream 937970 22767501 ~ 22768460 (+)
G115401 NA non-coding downstream 1153530 22983061 ~ 22983700 (+)
LOC122359996 NA non-coding downstream 1169918 22999449 ~ 23003110 (+)
siglec15l NA other upstream 1057824 20767278 ~ 20770392 (+)
slc4a7 slc4a7,LOC107666816,LOC107686077 other upstream 1523532 20267541 ~ 20304684 (+)
hjv hfe2,LOC107719159,LOC107666758,LOC107714319,LOC107592274 other upstream 1601139 20219644 ~ 20227077 (+)
LOC122360533 dcstamp,LOC107556953,LOC107592504 other upstream 2180410 19643829 ~ 19647806 (+)
G114382 NA other upstream 2499453 19327104 ~ 19328763 (+)
tgfbr2b tgfbr2,LOC107730143,LOC107600517,LOC107551196,LOC107713826 other downstream 20458 21849989 ~ 21872972 (+)
stt3b stt3b,LOC107668300,LOC107666808,LOC108434203,LOC107713794 other downstream 54378 21883909 ~ 21921531 (+)
G115193 NA other downstream 147586 21977117 ~ 21979368 (+)
LOC122359863 aldh5a1,LOC107704994,LOC107705391,LOC107700704,LOC107588482,LOC107755744,LOC107556105 other downstream 1080004 22909535 ~ 22915477 (+)
LOC122360067 calb1,LOC107704882,LOC107588486,LOC107556079,LOC107700706,LOC106580458 other downstream 1135038 22964569 ~ 22975774 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_010142 NA non-coding NC_007127.7 CM002900.2 39624124 ~ 39627370 (+)