G115207 (gpd1l,LOC107705153,LOC107713825,LOC107551192,LOC107666803,LOC107600618,LOC108434205)


Basic Information

Item Value
gene id G115207
gene name gpd1l,LOC107705153,LOC107713825,LOC107551192,LOC107666803,LOC107600618,LOC108434205
gene type unknown
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056714.1
NCBI id CM032083.1
chromosome length 28146790
location 21964855 ~ 21968535 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU170105
TATTTTATTGGTTACTTTCAAAAGCAGCATTTGTTTCAACGTTCAGCCTTGTTGACATTTGTTAGACACGCAACTTGCAAAAATGATCACattctcaggaaaaaaaacccaggaCGGATTCATATAGCAACATGAAAACGTATATAGTTTATCTACTGGAGTGTTAGACTTGGTACACTTCAACATTTCCACAGCTGAATACTTGTAGTATGAATTAAACTCTTacataaacactgaaaataataaaaacaacagaaatgacACTGTAACAGATACATGCTAAGAGCTagccttgaaaaaaaaacaaaaacagaaggCCATTATAGATCCAAACACTAGCTGCTCCTGTAAAACGCTCCTTCATTTGAAAATCACAGATCTTAATACTACTTTTTTTCATGgtataaataaagattacaTTAGTATTTGAATGCTAATCTTCATAAAGTTATTACAACTGGAACTGTAGATATGGTAGTTGATCAGGATGCTAAAGTAGTTACTATTTAGGGATTCAATAATTTGTGTTTTCAATGCATTCTTGAAATTTAGATATGCAACACTGtagtttttactgtaacatGATAAAAAGTAAAGACAACTATGTCATTCTATAACACGTTTTATGTTCCCTGTCTTGAAAGCACTTGGTCTTAAAAGGGGGCTGCTGGGAAACTGAGGTGACCGATTTAAGCCCCTTTTATAGAATATACTgtcctttaaaacaaaacaaaacttccATTCAAGTATTCGTTGACCTGCGACAGCTGTTCCTGACCAGTGAGGAGTTAAAAGGCATCTTCACAGAAATCTAAGTTTTACTTAATCTATCAAAAAGTTCAGTGTAAATggcagtttaaatatttatcagcATTAAACTAAGCAATTACAACGGAAATAAAGCGTGTTAAACCTAGTTTAAATGAAGCGTAACTATAAAAACTGGTATTATGCTGGTTCTACAGGATCGTAAAGATTGTAACGGAGGCATTGCAGTCGTGTCATGTTGCTCTCAATATGGACGTGTAGTGAGCCTCTATGATGAGGTCTCCACCGTCATTTAAAAAGAGGCATTTCATCTCTGTCAGTGAGGTGATATTGTGGGCCATCCACAAGAGGGCagtcagacagagagaaaaagagttaAAAATGCCATGTAGGCTCAAACACATGGCttttctgaaaaatcatttcGAGCACATTAGCCACAAAACCTGCTGGGTTGGAAACAAACCCCTGAGTTCAAGCCTAACCATTAGTGTAGAGTTGGACCTGGGACAAAAAGAGAACTTATTAatgaagaaaatgagaaatgttggaGGTAGGACCATCTAACAGAACGAAGAGGATGGTGATGAAGAAGGGGACACAGAGGAACTCTCACAGGTGTTCCGGATGGCTCTGCAGGCAGGTGATCATGTCCTGAACTGGTTTGTCCTCGAAACAGATCTGATAAACAGCCGTGAACAGTGGGAACCTGGAAAACAATGTAGATTTGAGATGTCACCGATATTGAAAATGCATCTAGACAAAGATCAGTGCGCCCTACAGCAAGTCATTTAGACACTGTCTGCTAGATGGAGAGTGGTGCAATGTATCCAGCACTTTCCATAAATAGGATACAAGTTAGTGTCATATTGATTCTTTCAAGATCATGtgatggcaaatctgaattttctgcaGCCATTaatctagtcttcagtgtcatatgacacttcagaaatcattttaatatgttaactTGGtgctttcttattattaatattgaaaacgGTTGctctgctaaatatttttgttgaaactgtgaTACACTTTCTTTCAGGATTCACTGATGAATACAAAGAATAGAAATCTTAAATTTACTACTCATAATTGGCAGTGTATCTAATACTAGAATGtggaatttgcatttttataactTAATGTCACTGTACACTAATTTGTACCATATTACACCTTAATATTATATACCAAATACAAAGAGATACAGACAGAGAGCGATCTtcactgaaaatgtattatttttcatgcataatAAAAGTTAGATGGAATTGGAACCTGTGTTACCTAAATGAGCATCATTTCAGGAGgctattgtaaatatataacaatatatgaTCTTATTcatatgataaatatatgaCTATTATTTAGAAGCAATGAcaaccaaaaaacatttacacatacTTATCCACTAGGCCCTTCTGTTTGAGAATATGATAAACCTCAGCAGAAGTCAATGGTCCCTGAAGCTTTTGTCCATTTAACATCTCCTTCTCCAGTTCCTCGATgctctgaaagaaaaagaaatctgtaTCGATCTTTTCTGCATCAGCAAATGTGCCTAATGCTCGGCGTCTTCCTTCAAtccataaaacataaattacgTGCTATCAGGCAAGTGATGAAAGGCTAAAAATGAATCTGTTTCCTTTTAACCTTCCCTGTCCTGGCAAAAGCTTCAGCCACGCGCCGGTTTCTTCCACCGTAGCAGGTAGTGATGAGGTCAGCCACGCCGCAGCTCTCGAGGAATGTGGCAGAGGATACGGAATCGTCTTTGCTGAAGAGTTTGGCGAAGGCGATCATCTCCATCAATCCCAGTCGAATGACAGCTGCTTTGGTGTTGTCTCCACACCGCAGACCATCGCAGAAGCCTGCGCCCACAGCAACATTTACCTTGAGGGCTCCACAGAGCTCTACTGTGTCAGCATCATCCACCACAGTGATTCTGAAGTTAGGGGTCTGCAGGAGCTCTTTGAACAAGATGCCGTTCTCCAACACCT

Function

symbol description
gpd1l Predicted to enable NAD binding activity; glycerol-3-phosphate dehydrogenase [NAD+] activity; and protein homodimerization activity. Predicted to act upstream of or within carbohydrate metabolic process and glycerol-3-phosphate catabolic process. Predicted to be located in cytoplasm. Predicted to be part of glycerol-3-phosphate dehydrogenase complex. Predicted to be active in cytosol. Human ortholog(s) of this gene implicated in Brugada syndrome 2. Orthologous to human GPD1L (glycerol-3-phosphate dehydrogenase 1 like).

NR:

description
PREDICTED: glycerol-3-phosphate dehydrogenase 1-like protein

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU170105 True 2783 TUCP 0.38 2 21964855 21968535

Neighbor

gene id symbol gene type direction distance location
osbpl10b osbpl10,LOC107600617,LOC107713824,LOC107551176,LOC107705753,LOC107668315 coding downstream 3364 21922962 ~ 21961491 (-)
hint3 hint3 coding downstream 308135 21654319 ~ 21656720 (-)
trmt11 trmt11,LOC107668323,LOC107713829,LOC107567767,LOC107730191,LOC107666854,LOC107600515 coding downstream 313744 21640097 ~ 21651111 (-)
rspo3 rspo3,LOC107666888,LOC107713808,LOC107600514,LOC107591889 coding downstream 533048 21412868 ~ 21431807 (-)
trnas-aga_117 NA coding downstream 555830 21408944 ~ 21409025 (-)
kiaa1143 kiaa1143,zgc:77056,LOC107713807,LOC107600662,LOC107551194,LOC107679647 coding upstream 302 21968837 ~ 21970707 (-)
zdhhc3a zdhhc3a,zdhhc3,LOC107679645,LOC107600619,LOC107666804,LOC105908916 coding upstream 4137 21972672 ~ 21982803 (-)
sybu LOC107666828,LOC107713821,LOC107705165,LOC107551189,LOC107679650 coding upstream 22739 21991274 ~ 22001056 (-)
trhra trhra,LOC107600665,LOC107705826,LOC107666857,LOC107551182,LOC107679641,LOC107713802 coding upstream 156161 22124696 ~ 22129509 (-)
emc2 emc2,LOC107600623,LOC107666844,LOC107679651 coding upstream 211116 22179651 ~ 22208604 (-)
G115170 NA non-coding downstream 90804 21873826 ~ 21874051 (-)
G115155 NA non-coding downstream 139418 21825198 ~ 21825437 (-)
G115098 NA non-coding downstream 575708 21388815 ~ 21389147 (-)
G115051 NA non-coding downstream 633497 21331012 ~ 21331358 (-)
G115042 si:dkey-22o22.2,LOC107668308,LOC107713796,LOC107592533,LOC107666790,LOC107717379,LOC107600533 non-coding downstream 650109 21283464 ~ 21314746 (-)
G115262 NA non-coding upstream 261705 22230240 ~ 22237066 (-)
G115335 NA non-coding upstream 714892 22683427 ~ 22683638 (-)
G115496 NA non-coding upstream 805231 22773766 ~ 22774032 (-)
G115536 bnipl,LOC107755792,LOC107556108,LOC107755808 non-coding upstream 917180 22885715 ~ 22888001 (-)
G115548 LOC107704994,LOC107705391,LOC107588482,LOC107755744,LOC107700704,LOC107556105 non-coding upstream 942344 22910879 ~ 22911323 (-)
G115149 NA other downstream 161051 21801475 ~ 21803804 (-)
G115141 NA other downstream 259896 21704018 ~ 21704959 (-)
cenpw cenpw,LOC107600551,LOC107668290,LOC107666774,LOC107567752 other downstream 350652 21605958 ~ 21614203 (-)
G115116 NA other downstream 403639 21560221 ~ 21561216 (-)
mettl6 mettl6,LOC107600537 other downstream 553083 21409959 ~ 21411772 (-)
eny2 eny2,LOC107600664,LOC107551183,LOC105908906 other upstream 119106 22087641 ~ 22089092 (-)
cdc42se1 cdc42se1,LOC107704996,LOC107705438,LOC107588480,LOC107700699,LOC107556109,LOC105018866 other upstream 923567 22892102 ~ 22901187 (-)
G115554 NA other upstream 964092 22932627 ~ 22933967 (-)
G115882 pou3f2,pou3f2b,LOC106584047,LOC106605033,LOC107711728,LOC107704941,LOC107700690 other upstream 1551273 23519808 ~ 23524382 (-)
usp45 usp45,LOC107716853,LOC107587766,LOC107711747,LOC107552817,LOC107704836 other upstream 1614458 23582993 ~ 23609841 (-)

Expression


Co-expression Network