G115288


Basic Information

Item Value
gene id G115288
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056714.1
NCBI id CM032083.1
chromosome length 28146790
location 22527157 ~ 22530262 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU170216
gtgtcacatctctggactctttgtttgtttttgtcccgtgccatgtgctccctgtgccctgccttccctccgtgttaattatgttattgtcatcagctgtgtctcgtcaattaccctgtgtatttaagtcctgtgttttgagttctgtttgtccgagcgtcaaggtccctatcCGATGTCTACACccgtgtttatcctgcctgcctgttcgacctgcctgtctgtatatcttttattttaccattttggaattaaacccctttattttcattgcatctcgttgtgtgctctcgtgcttaccacacaaccgtgaca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU170216 True 315 lncRNA 0.45 2 22527157 22530262

Neighbor

gene id symbol gene type direction distance location
rspo2 rspo2,LOC107679648,LOC107705839,LOC107600624,LOC107755916,LOC107551185 coding upstream 214132 22261301 ~ 22313025 (+)
eif3ea eif3ea,LOC107755923,LOC107551184,LOC107679649,LOC107705216,LOC107666832,LOC108434212 coding upstream 268391 22220874 ~ 22258766 (+)
LOC122360094 tmem74,LOC107705834,LOC107666858,LOC107713801,LOC107679640,LOC107551181,LOC107579295 coding upstream 387330 22136568 ~ 22139827 (+)
gdf6a gdf6a,LOC107705204,LOC107600621,LOC107666829,LOC107551190,LOC107679643,LOC107713806 coding upstream 516998 22004235 ~ 22010159 (+)
ebag9 ebag9,LOC107666870,LOC107705161,LOC107600620,LOC107679646,LOC107713822,LOC107551191 coding upstream 537241 21983890 ~ 21989916 (+)
adgrb1a adgrb1,adgrb1a,LOC107697227,LOC107756055 coding downstream 23501 22553763 ~ 22639975 (+)
si:ch211-198c19.1 si:ch211-198c19.1 coding downstream 205617 22735879 ~ 22737796 (+)
cep162 cep162,LOC107681424 coding downstream 214622 22744884 ~ 22761065 (+)
pogzb pogzb coding downstream 286801 22817063 ~ 22830341 (+)
selenbp1 selenbp1,LOC107588475,LOC107556087 coding downstream 303466 22833728 ~ 22838634 (+)
G115200 NA non-coding upstream 525540 21997010 ~ 22001617 (+)
G115157 NA non-coding upstream 697626 21828216 ~ 21829531 (+)
G115134 NA non-coding upstream 832613 21693494 ~ 21694544 (+)
G115074 NA non-coding upstream 1135995 21390781 ~ 21391162 (+)
G115020 gbp,LOC107666878,LOC107717378,LOC107600509,LOC107668283,LOC107713814 non-coding upstream 1357804 21167994 ~ 21169353 (+)
G115342 NA non-coding downstream 237239 22767501 ~ 22768460 (+)
G115401 NA non-coding downstream 452799 22983061 ~ 22983700 (+)
LOC122359996 NA non-coding downstream 469187 22999449 ~ 23003110 (+)
G115384 NA non-coding downstream 478342 23008604 ~ 23009835 (+)
G115371 NA non-coding downstream 522158 23052420 ~ 23077876 (+)
G115193 NA other upstream 547789 21977117 ~ 21979368 (+)
stt3b stt3b,LOC107668300,LOC107666808,LOC108434203,LOC107713794 other upstream 605626 21883909 ~ 21921531 (+)
tgfbr2b tgfbr2,LOC107730143,LOC107600517,LOC107551196,LOC107713826 other upstream 654185 21849989 ~ 21872972 (+)
siglec15l NA other upstream 1756765 20767278 ~ 20770392 (+)
slc4a7 slc4a7,LOC107666816,LOC107686077 other upstream 2222473 20267541 ~ 20304684 (+)
LOC122359863 aldh5a1,LOC107704994,LOC107705391,LOC107700704,LOC107588482,LOC107755744,LOC107556105 other downstream 379273 22909535 ~ 22915477 (+)
LOC122360067 calb1,LOC107704882,LOC107588486,LOC107556079,LOC107700706,LOC106580458 other downstream 434307 22964569 ~ 22975774 (+)
LOC122360203 LOC107704907,LOC107714612,LOC107587796 other downstream 580021 23110283 ~ 23116815 (+)
wnt4b wnt4b,LOC107704912,LOC107552850,LOC107587793,LOC107671942,LOC107724774,LOC108443656 other downstream 634304 23164566 ~ 23169677 (+)
rps9 rps9,LOC107587787 other downstream 691788 23222050 ~ 23223928 (+)

Expression


Co-expression Network