G115422


Basic Information

Item Value
gene id G115422
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056714.1
NCBI id CM032083.1
chromosome length 28146790
location 23141073 ~ 23143458 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU170408
GTTACCTTTTAATTGCAggtctaaaaaacaaaacaaaacagaaacataagACATAACAATAACAGGGTAACAACGACAATTACAAAGTGAGATATTCAGACCTTCTGAAAGTGTAAAATTAGACATTAAATTAAGAGCTGCATTTTTTCACCTGTGCTACGGGGATTTTGTCTTCTCTTGTAAGGAAAATGAACTGGGACTTATTTTCTATGACGTTATACACAAGCCAATCAGGAGAGAGAAAATGGAATAAATGTGGGTTCTTAAAGCAGCAGTTCtcataattaaacatttttttgattataatatatatatttaatctaaaGGAATGGAAGGTCATTTGATGTCCTTATACTAGTTGTGACCCTGTCCCAATTGTACCTGTGAAAAACATAAGGTGTTCTAGTTGacattttagatttcatttttagagtgtttatgtgttttaGAAGGGTATTTCTGTAGAGCCTGCTTCAGTGGATCATTACCCGACAGTCTATCCGGCATTATGTCACCAAAGTATGGACACTGAGATGTATGTGGGTATTGGGACAGGGATTGTGTTTACATCAGCATAAACCTTTCACAAGTTGGAAACCACATGATGTTTCAGGGTTCAAGCAGGCATTTCGAATTTAAGCTTGAAGCATAATTGtggaaacacacaaaaacagtgaTTCAACTAGTGTGAATTACGACAAAACACACCTGAGGAGGAAAGAGTCCCCACTGCAAAGATCCATTCCACGCAAGGCAAAAATCCACACCAGCTCTTCAACCTTGCCCTGCATTGCTTACAACAGTGCAGAGGAGGTGACCTGGAAAACCTGATCTGGATGACACTGGAGAACGGTTTGGGTGCTGTGTATTCTAACATACGTATGCATCTCTCTGGTCAGTAGGTGTGTGATCACAGGATTTTCAAATGGAGGAGGTTGGAATGCCTCTAAATTGAGCTTTACAAGAAACATTAGGTAACCACAGTGTGTTAGCTAGAAACCGCTCCACTCTTCTTCTGTCCAAACTAGTGTGGGCAGCTGGAACTtatttcagatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatacacatacacattgcATCTGATCACCTGACCCAGGTgcgtgtctgtttgtgtgtgagatgattccTCGTTGTGACTTATGGGAGGTAAGAGTGAAAACTTTATCCAGGGGTCATCAGCGTGGCGCCTGCGTCTGTGTGACCTCCGGTCCTCGGCTGGCCAACCGGCTAAGAATGCTTCTTTCTGACATCTGCAGCCGCACAGCGACGGGTGGAATCCGAGCGATGGTTGCTGGGAGCCGGGTGACATCTGCCTTCATGTCGCTGAGTAGCTCCTCCAGTTGTTTGAGAACTGACTTTGTGTAGCACTGCATTAGCAGGTTTGTTTCCTGACATGGACTCTTTACTGAGGTGCTGGTGCGACTCTGCCAGACACTCGACCTCACTGAAGCGTGTGTTGAGTGCCATGGAGGGGTGAGAGGGGTCCTCTGTCATGTTTAGATATGCAGCACGTCTAAGCTGCTCCTCGATCACCAGAGCCTGTTCCAGCAGCTAAAGAGAGATAGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU170408 True 1627 lncRNA 0.42 2 23141073 23143458

Neighbor

gene id symbol gene type direction distance location
LOC122360866 phactr4b,LOC107587745,LOC107597106,LOC107700669 coding upstream 88013 23030988 ~ 23053060 (+)
LOC122360864 LOC107732827,LOC107587847,LOC107704842,LOC107700682,LOC107756122,LOC107597135 coding upstream 132614 23004912 ~ 23008459 (+)
LOC122359865 LOC107700662,LOC107556081 coding upstream 207091 22930421 ~ 22933982 (+)
elp6 elp6,LOC107756165,LOC107705426,LOC107704995,LOC107700678 coding upstream 232088 22907213 ~ 22908985 (+)
gabpb2b LOC107700702,LOC107755760,LOC107556107,LOC107705407,LOC107588481 coding upstream 235216 22901809 ~ 22905857 (+)
mlf2 mlf2,LOC107671951,LOC107704913,LOC107724787,LOC107714604 coding downstream 33366 23176824 ~ 23181429 (+)
atn1 LOC107714603,LOC107587791,LOC107704916 coding downstream 41570 23185028 ~ 23197722 (+)
phc1 LOC107672038,LOC107714597,LOC107724796,LOC107552845,LOC107587786,LOC107704919 coding downstream 90999 23234457 ~ 23243764 (+)
mboat7 mboat7,LOC107587783,LOC107716833,LOC107711731,LOC107700769,LOC107552840,LOC107704925 coding downstream 124052 23267510 ~ 23273792 (+)
tmc4 tmc4,LOC107711726,LOC107700770,LOC107552843,LOC107579598 coding downstream 130468 23273926 ~ 23281694 (+)
G115420 NA non-coding upstream 32040 23108123 ~ 23109033 (+)
G115416 NA non-coding upstream 45663 23091343 ~ 23095410 (+)
G115371 NA non-coding upstream 63197 23052420 ~ 23077876 (+)
G115384 NA non-coding upstream 131238 23008604 ~ 23009835 (+)
LOC122359996 NA non-coding upstream 137963 22999449 ~ 23003110 (+)
G115462 NA non-coding downstream 122014 23265472 ~ 23266469 (+)
G115706 faxcb,LOC107587769,LOC107704942,LOC107716849,LOC107700756,LOC107711729,LOC107552822 non-coding downstream 392022 23535480 ~ 23559924 (+)
G115714 faxcb,LOC107700756,LOC107716849,LOC107587769,LOC107711729,LOC107552822 non-coding downstream 412163 23555621 ~ 23568054 (+)
G115718 NA non-coding downstream 429515 23572973 ~ 23576648 (+)
G115730 NA non-coding downstream 521808 23665266 ~ 23677259 (+)
LOC122360203 LOC107704907,LOC107714612,LOC107587796 other upstream 24258 23110283 ~ 23116815 (+)
LOC122360067 calb1,LOC107704882,LOC107588486,LOC107556079,LOC107700706,LOC106580458 other upstream 165299 22964569 ~ 22975774 (+)
LOC122359863 aldh5a1,LOC107704994,LOC107705391,LOC107700704,LOC107588482,LOC107755744,LOC107556105 other upstream 225596 22909535 ~ 22915477 (+)
G115193 NA other upstream 1161705 21977117 ~ 21979368 (+)
stt3b stt3b,LOC107668300,LOC107666808,LOC108434203,LOC107713794 other upstream 1219542 21883909 ~ 21921531 (+)
wnt4b wnt4b,LOC107704912,LOC107552850,LOC107587793,LOC107671942,LOC107724774,LOC108443656 other downstream 21108 23164566 ~ 23169677 (+)
rps9 rps9,LOC107587787 other downstream 78592 23222050 ~ 23223928 (+)
G115449 NA other downstream 107924 23251382 ~ 23254566 (+)
LOC122360149 LOC107704935,LOC107716843,LOC107587775,LOC107552833,LOC107700676,LOC107711721 other downstream 131531 23274989 ~ 23358779 (+)
tstd3 si:dkey-165n16.1,LOC107700689,LOC107704863,LOC107716817,LOC107587896,LOC107711730 other downstream 465990 23609448 ~ 23612393 (+)

Expression


Co-expression Network