G115714 (faxcb,LOC107700756,LOC107716849,LOC107587769,LOC107711729,LOC107552822)


Basic Information

Item Value
gene id G115714
gene name faxcb,LOC107700756,LOC107716849,LOC107587769,LOC107711729,LOC107552822
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056714.1
NCBI id CM032083.1
chromosome length 28146790
location 23555621 ~ 23568054 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU170828
CTGTTGAGTTCCACAGTAGAAAGTGTTTGAATCAACATATATGATGGCAGTTCTACTACAGCGTTTTGTTactttactgttaaaaaaaacataatatttttggcCatttttgagaCCTCCTTCTTGAATCAGCcatgtattttttactgtatacaaataaatgcagccttgctgaggaAAAGACAATTCTTTGAAAGCATtggaaaatattacagatcccgattaaatgcatgaaaatgttaatgagcAGCTGACGGTTTTAGCGCAGATTTGGACTTTGAACCCTGGCTAACAAGCAGACACACCGAGCGCCGTGCAGCACTGTTTGAATTGCTAATCATTCGTCTTTTCGAGAATTTCGGTCATCGCACAGTACCCAGCAACAAGCATCCTCCCTCTTCTCATCGGAGACATGAGATGCGGTGCTAAACGGCCTCTCGCTGTCGGTGCTTGTAATGAGTGCGGCATCTTTCTCGGACACTTTTAAATGCCTTCACAATAACGACATGTATGCTCCATTAACGCGAGCCTATATTCGATCACGTCAAGTCATTGTTCAGCCTGATTTATTTAGTCGGTGGTTCGGCCTAAAagaactcatctacatcttggatggcccgaAGGTGAGCgcattttagcacatttttattatggcacatttttatttgttctttaaagCTTTCAAAATCAAGAACTCCCCAGCCAAATAAACAAAGCGCAGAACCCTAGTCAGTAATCCGTAGGTGCATATTTGATCCTCAGCAGCGGAGAAGTGAGTCACTCTGAAAGGCAGCACATGACTCACCAGTACAAGTGTTCCTCCACCATGGTGGTGATGGCCCGCGCTACCGCCTGCTCCTGAGCGCTCAGACTCTTGTTTAGACTCACACCAAGTTTCTCCTCCAGAAAGTCAATTATAAATTCAGTTCCGCACACCTGCTCATAATTATACTCGATCCAAGGCATCTTGCCCTGGGAGGAGAGGCTCCCATCAAAGTAACTCTGCAAAACAATGAAGCATAGTGGGTGTGAAAAGATGCAAACCTTACATTTAGCAgttataaaatcacaataatattattattaattatataaaaaacatgacTGCTTATTCCGGAGCATCTGGATTTAAACCGAAACAACATAATCctattttctttaatgaattcCATTGACATTTCAACAGCAGATGGTGTGACTTTCAATAACTGCATGTAACCACTGATCAAAGGGAAAGGACCCCAAAATCCAAACCGCTCCTTTATGCATACTTGATAGGGCAGATCAACCATCCGCAGATAGGTCTCCATCTTCAGGCAGAAAGGTGAAAGGCTTGGCACCCCGTTTTTTGGCCTGGAGAACTGGTGAAGGATGATGGCGTCTTTAGAATCCAACTGTTGTTCTTTCCTGTAAGGAGGAAATCAACCATAGATTGTAAAACTACTACGTAATTTCAATATGAACAGATAAATAAAAGGCCTCTCAAAATATGGTGATGGTTAAATATCACAGTCAGACATATGGAACAAAACTTTGTAATTAGTTGGCATgcattttgatcaaaaaatgGCATGCGTTTTATCAGCATCTTTGCTCTTTGGGAGAATCCATCACcctgaaaatgaaatgcatcgTGCTTTAACagttgaagtaaaaaaaaaaaaagttttacaggaacattatttagctttaaaagcAACTATTTATCCCCCAGAAGCAAGTGGAATGCATCGGAAAAGGTCTTATACTATAATTATGAGGAAACAGCAAGATGTGTGTGGGAGGAAACAGACAGGTCTTATTTCACAAGCAGAAGCTGCAAGGCCAAGCCTGAGCTTTTAAAACAACACCGCTTTGTCCTATTCTGATCACACGTTCAAAAATTCATTCTTCTAACACATGTGATTTGTATAATCAAACTGTGGAATATTACTCTGAATCACGGTATTTTGTGGGGGGAGGGAAAATACTTTAGATTTCCGGAAATCCCTTCAATATAGATCAGAAAGATTAGCACAGATTCGGGAACGGGACAAATCCGTCCACACTTAGCCATCATTATTAACAAGCAATCATGATGTCTACGCTCAACACACTAACAATGAATACTGTCAGGGCAAGGTTAATATAATACACAACAATAGAAATTTCAGTAACACTTATAACTTAGCATGGCAGTCAtgttaaaatactgaaaacgAAATTAAGATCACAGAGTTTCCATgcacgtatttatttatttgtttgggtGCTATTTAATTTAGAGTTAACAGACTATGAAAGTTTATTACAAACCCATTATAAAAAGGCCCTTCAGACGCCACTAAGCTTATCGGATATACTTCCATGTGGCTCAAAAATGATCATTCTGACGACCTGCGTCTATTTATGTCTTTTTACACCCAAAGACTAATCTATATTCAGTGGTAAACTGGATGGAGTGTAAAGCTTCAGTACGATCGGAATGCTGCAGAGCTCAATACTCAAACATGTCGCTGTCCTCTGCGTGCGGTGCTGAAATCCTCCAGTCACGTACCGCATCCACGTCCgtacacacatttaaacaagCTGCAGCTAAAACGGAAGCTATTTAGTTCTTCCAACAGCACTACAGCCCCCCCTCGAATTTCATTAGATAACGGCCTGCAGTTGAACCAAGAAAGGTCGCTTCACAACACAACTCAAGGACATCGTGATCCGGCGAAGTAAACAGTCAAGATCACGTGTCGCGTAATGACGCTTTatttacacacgcacacaaaaaaaataataattcatcaaAAGGTACTTTTTGCTCAGCGCCAATGTAAACAAGGGCAATTCCGGCTGGGTATTGATGACAGGGCGTTTTCATACGGTCCCGTGCGGCCAAACACCGCATGTGCATGTCACTTGGAAAACGTGACTGGATGCGTCCCAGCTCTCACGCGAGCTCGAGGAAAACACGAGAACCTCACTGCCATTGTCAAGGCGACCAACACGCGCATCTTTTCCTAGAAAGGTTCAAATACATAGTGCGTGCGTAACGAAACATCGCAAACGGCAACAGTAGGTCATTTCATATATGATTTGACATCATCGCAGCAGGCCACAGCACCGACCTGATGGAGAGCAGCTCGTGCAGCAGATACGCAGCCGCGGCCAGCAGGGCACCTCCGGTGATGTAAAGCGTCTTCCTCCACCAGGAATCCGATACCAATCCCGACATGATCCCGCCGAAATCCTGCACAGGGACGGCTACTATGTACCCATAAAATAAGTGGCGCTCATCAGAGCCACACAACCCGAAGGACGGGCTCtgattccggccaagatcaacCACGAACGAGCGGGAGGAGGCGAAACCCGCGACCCAGtacattctctctctccccccgCTTCCTCCAACGAATCCTGCGCCACTTCATTTATCCATGTAAATACGGACAAATGTTACATGGTTGTGTGTTATGTCGGGCTCGCGAAgtgaaagaaaagcattttaacGAGATCCGGCTCCCGCGCGCGGCTCCGCATCCTCCTTTGTTGCTGTGCTGAAGCTGAGTGACGTCACGACGCATCACGCAGGGCAGCTAggcaaataaaattattattaaacagacCTGAACAGAATTTGAAGGGCATCTCGGTTTGCAGTTATTTACGGCGTCCGTTTCGTGtatgtaatgttataaataatatcaaacgTTTACCCTTAAATTATATTACGTGTGCAAATACATAACGATTCCATCTATAATGTCTGTAAATGTGATACAtctgtagaaaataaaaataataattgtttcgGGCTAAATAAAACACCCTCTCAAATATGACACAagtgatttcattttatttagtaccTATACTTTTTAAGTCCCAAATCATTATATAATTCTCTATGTCTGTTTGGCCTGTGACAAAAAACACCCAAAGATCACcaccacaaaacacacaactaAATGATTGTTAAAATATACCAACAAATCTTTTGAAATGACATGTGGCATGCGACTGCTGCATGTTAAGCAGACCAAAAGCGCTTCAATCTGATTCCGTTCTCATTTTAACAAGAGCTTTACAAAAGATGTTCTATGAATCGTGCTTCtcatacaaaatgttttatcaagTAACACATTGCAAAGAATGATTATTACCGGTTCAGCAACTCTTTCACTATGAAACATATTTTGAGATCTTAAGTGTGGGTTAGTTCTCTGTTCTCGAGAAGGTGAAGTCTTTTGATAGCATTTCCACATTAAAGTAGCTCAGCTGTAACTCGTGGCTCGACCTGGCTCATCTATATTCTCACTCTCAGCCCACATCCGGTCAGGCTGGGGTTCTTCTCTGCGTTTGATTGCATGCAGGGCATAGTTGATGGCAGTGCTCTTCTGCCAGCTCCAAGCTCCAGTGAGAGGATTGTACATCATGCCTCTGATAGCCTCCACGTAGAAACCAACTGCAATACAGTAAGATGGTAAAACAAGTACATTCCGCTGTACAAAAATAGATCATATCgaagcattaaatattatataccaGGCTTTTCCAGCAGTAGACTACCTGATATTTAAACAGCAACGGATATCAATGATAGAAAAGTGGTGGGGTATTACCAAGAAACTGATCAATGAATGATAGTGAGAGAAATGGGAGACAGAGGTGGCACTCACAAGACTCCAGAAGTCGTTCCAAATCCTCTGGGCTGATGAACTTCTCCCAGTCGTGAGTGCCACTCGGTACAATCCTTAACAGCTGCTCTGCCGCCACAATCCCAAAAACGTAGGACAAGTTGGTTTTGTTAAGAGTGGTGATGAAAAGAGAGCCA
>TU170832
CTGTTGAGTTCCACAGTAGAAAGTGTTTGAATCAACATATATGATGGCAGTTCTACTACAGCGTTTTGTTactttactgttaaaaaaaacataatatttttggcCatttttgagaCCTCCTTCTTGAATCAGCcatgtattttttactgtatacaaataaatgcagccttgctgaggaAAAGACAATTCTTTGAAAGCATtggaaaatattacagatcccgattaaatgcatgaaaatgttaatgagcAGCTGACGGTTTTAGCGCAGATTTGGACTTTGAACCCTGGCTAACAAGCAGACACACCGAGCGCCGTGCAGCACTGTTTGAATTGCTAATCATTCGTCTTTTCGAGAATTTCGGTCATCGCACAGTACCCAGCAACAAGCATCCTCCCTCTTCTCATCGGAGACATGAGATGCGGTGCTAAACGGCCTCTCGCTGTCGGTGCTTGTAATGAGTGCGGCATCTTTCTCGGACACTTTTAAATGCCTTCACAATAACGACATGTATGCTCCATTAACGCGAGCCTATATTCGATCACGTCAAGTCATTGTTCAGCCTGATTTATTTAGTCGGTGGTTCGGCCTAAAagaactcatctacatcttggatggcccgaAGGTGAGCgcattttagcacatttttattatggcacatttttatttgttctttaaagCTTTCAAAATCAAGAACTCCCCAGCCAAATAAACAAAGCGCAGAACCCTAGTCAGTAATCCGTAGGTGCATATTTGATCCTCAGCAGCGGAGAAGTGAGTCACTCTGAAAGGCAGCACATGACTCACCAGTACAAGTGTTCCTCCACCATGGTGGTGATGGCCCGCGCTACCGCCTGCTCCTGAGCGCTCAGACTCTTGTTTAGACTCACACCAAGTTTCTCCTCCAGAAAGTCAATTATAAATTCAGTTCCGCACACCTGCTCATAATTATACTCGATCCAAGGCATCTTGCCCTGGGAGGAGAGGCTCCCATC

Function

symbol description
faxcb Predicted to be active in cytoplasm. Orthologous to human FAXC (failed axon connections homolog, metaxin like GST domain containing).

NR:

description
PREDICTED: uncharacterized protein LOC104955046

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU170828 True 4810 lncRNA 0.42 2 23555621 23568054
TU170832 False 993 lncRNA 0.44 2 23555621 23564237

Neighbor

gene id symbol gene type direction distance location
pou3f2b pou3f2,pou3f2b,LOC106584047,LOC106605033,LOC107711728,LOC107704941,LOC107700690 coding upstream 32345 23520144 ~ 23523276 (+)
klhl32 klhl32,LOC107704937,LOC107700760 coding upstream 164727 23369980 ~ 23390894 (+)
LOC122360146 LOC107716840,LOC107704933,LOC107587774,LOC107700761,LOC107552831 coding upstream 203021 23347978 ~ 23352600 (+)
gprc6a LOC107716809,LOC107587859,LOC107711720,LOC107552792,LOC107704834,LOC107700677 coding upstream 218782 23330223 ~ 23336839 (+)
sphk2 LOC107704932,LOC107716839,LOC107711736,LOC107552834,LOC107700765 coding upstream 227598 23315942 ~ 23328023 (+)
zgc:172323 zgc:172323,LOC107587895,LOC107700752,LOC107716818,LOC107711723,LOC107683363,LOC107577100 coding downstream 47024 23615078 ~ 23618825 (+)
prdm13 prdm13,LOC107716819,LOC107700751,LOC107704864,LOC107711749 coding downstream 55685 23623739 ~ 23628860 (+)
prss35 LOC107704868,LOC107730928,LOC107716822,LOC107716824,LOC107730929,LOC107597124,LOC107587853 coding downstream 177476 23745530 ~ 23752036 (+)
akirin1 akirin1,LOC107700743,LOC107730931,LOC107704951,LOC107597130 coding downstream 255634 23823688 ~ 23831522 (+)
rhbdl2 rhbdl2,LOC107716826,LOC107704870,LOC107597139,LOC107730925,LOC107700688 coding downstream 263896 23831950 ~ 23835923 (+)
G115462 NA non-coding upstream 289152 23265472 ~ 23266469 (+)
G115422 NA non-coding upstream 412163 23141073 ~ 23143458 (+)
G115420 NA non-coding upstream 446588 23108123 ~ 23109033 (+)
G115416 NA non-coding upstream 460211 23091343 ~ 23095410 (+)
G115371 NA non-coding upstream 477745 23052420 ~ 23077876 (+)
G115718 NA non-coding downstream 4919 23572973 ~ 23576648 (+)
G115730 NA non-coding downstream 97212 23665266 ~ 23677259 (+)
G115747 pnrc2,LOC107597121,LOC107700745,LOC107704949,LOC107716857,LOC107587761 non-coding downstream 149797 23717851 ~ 23815099 (+)
LOC122360295 NA non-coding downstream 218774 23786828 ~ 23802584 (+)
G115782 NA non-coding downstream 288629 23856683 ~ 23856949 (+)
LOC122360149 LOC107704935,LOC107716843,LOC107587775,LOC107552833,LOC107700676,LOC107711721 other upstream 196842 23274989 ~ 23358779 (+)
G115449 NA other upstream 301055 23251382 ~ 23254566 (+)
rps9 rps9,LOC107587787 other upstream 331693 23222050 ~ 23223928 (+)
wnt4b wnt4b,LOC107704912,LOC107552850,LOC107587793,LOC107671942,LOC107724774,LOC108443656 other upstream 385944 23164566 ~ 23169677 (+)
LOC122360203 LOC107704907,LOC107714612,LOC107587796 other upstream 438806 23110283 ~ 23116815 (+)
tstd3 si:dkey-165n16.1,LOC107700689,LOC107704863,LOC107716817,LOC107587896,LOC107711730 other downstream 41394 23609448 ~ 23612393 (+)
cnr2 LOC107716825,LOC107587892,LOC107704869,LOC107700673,LOC107597120 other downstream 247870 23815924 ~ 23822446 (+)
LOC122360598 NA other downstream 1205765 24773819 ~ 24832618 (+)
G116057 NA other downstream 1435208 25003262 ~ 25057168 (+)
G116099 rab5a,LOC103388351,LOC105904716,LOC101157247,LOC108411561 other downstream 1984809 25552863 ~ 25554807 (+)

Expression


Co-expression Network