G116082


Basic Information

Item Value
gene id G116082
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056714.1
NCBI id CM032083.1
chromosome length 28146790
location 25085022 ~ 25085365 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU171367
CTTGTTTCTTTTTAGAGGGCCGAGCATACTGCCTCGCTGGTTGGTTTAGGAGGATTTCATCAcCTTGAGAATGAAGGataactttgtttttaatatatgctgTGTCACTGCATGTCTGCTTTAAACTATTAGAATTATTAATGATGCTGAAGTTCACTGAGGAAAAGATTCGGTTTATGTCTTCTGTAGCTCAAACTATTTAATACACGTCAATGGTGACAAAGTGTCACCAAGAGTGGGGGTGATTTGGTTGGCCACATC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU171367 True 261 lncRNA 0.39 2 25085022 25085365

Neighbor

gene id symbol gene type direction distance location
sh3d21 LOC107588495,LOC107705578,LOC107700715,LOC107556095 coding upstream 65573 25007746 ~ 25019449 (+)
thrap3a LOC107705588,LOC107704980,LOC107588494 coding upstream 77723 24968186 ~ 25007299 (+)
map7d1a map7d1a,LOC107705598,LOC107556093,LOC107700716 coding upstream 119786 24945236 ~ 24965236 (+)
si:ch211-1i11.3 LOC107705646,LOC107704978,LOC107588497,LOC107700717,LOC107556089 coding upstream 161080 24907377 ~ 24923942 (+)
cited4b cited4b,LOC107705696,LOC107704975,LOC107588500,LOC107755532 coding upstream 199807 24882873 ~ 24885215 (+)
sh3bp5b sh3bp5b,LOC107705532,LOC107588490,LOC107755668,LOC107700710,LOC107704986,LOC107556100 coding downstream 7816 25093181 ~ 25106459 (+)
col6a4a LOC107704846,LOC107705786,LOC107588488 coding downstream 51571 25136936 ~ 25161646 (+)
decr1 decr1,LOC107704989,LOC107705494,LOC107756153,LOC107700707 coding downstream 87210 25172575 ~ 25177859 (+)
LOC122360523 rab5ab,LOC107688205,LOC107707637,LOC107716989,LOC100701272,LOC103038585 coding downstream 120931 25206296 ~ 25213787 (+)
efhb efhb,LOC107671426,LOC107688256,LOC107743149 coding downstream 214894 25300259 ~ 25312298 (+)
G116072 NA non-coding upstream 14645 25067398 ~ 25070377 (+)
G116048 NA non-coding upstream 194460 24890275 ~ 24890562 (+)
G116043 NA non-coding upstream 198667 24885714 ~ 24886355 (+)
G116039 NA non-coding upstream 239892 24843422 ~ 24845130 (+)
G116029 NA non-coding upstream 248105 24835971 ~ 24836917 (+)
G116101 NA non-coding downstream 206846 25292211 ~ 25323742 (+)
G116120 NA non-coding downstream 220396 25305761 ~ 25308931 (+)
G116136 NA non-coding downstream 615851 25701216 ~ 25701429 (+)
G116137 NA non-coding downstream 616118 25701483 ~ 25702533 (+)
G116143 NA non-coding downstream 645821 25731186 ~ 25731651 (+)
G116057 NA other upstream 27854 25003262 ~ 25057168 (+)
LOC122360598 NA other upstream 252404 24773819 ~ 24832618 (+)
cnr2 LOC107716825,LOC107587892,LOC107704869,LOC107700673,LOC107597120 other upstream 1262576 23815924 ~ 23822446 (+)
tstd3 si:dkey-165n16.1,LOC107700689,LOC107704863,LOC107716817,LOC107587896,LOC107711730 other upstream 1472629 23609448 ~ 23612393 (+)
LOC122360149 LOC107704935,LOC107716843,LOC107587775,LOC107552833,LOC107700676,LOC107711721 other upstream 1726243 23274989 ~ 23358779 (+)
G116099 rab5a,LOC103388351,LOC105904716,LOC101157247,LOC108411561 other downstream 467498 25552863 ~ 25554807 (+)
G116141 usf2,LOC107688254,LOC107707624,LOC107671406,LOC107568863,LOC107552520 other downstream 633155 25718520 ~ 25778407 (+)
hmgn2 NA other downstream 1127367 26212732 ~ 26215779 (+)
G116445 ubr5 other downstream 1756015 26841380 ~ 26842025 (+)
G116459 LOC102223539,LOC107092448,LOC103472369,LOC102305030,LOC102207943,LOC100703061,LOC104937165 other downstream 1810073 26895438 ~ 27171468 (+)

Expression


Co-expression Network