G116101


Basic Information

Item Value
gene id G116101
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056714.1
NCBI id CM032083.1
chromosome length 28146790
location 25292211 ~ 25323742 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU171401
GAAAAAACGCGCTCTGGATTGGACAAGCGAGTCAAACGAAAGTCACAGTGGAAAAGGAGGAATCTACAACAGGATAAGTTGATCCTGCTAACTGTAACTCATCTGATGGAACTGCTGGTGTATAGGATATTTATATCCCAAACACGCTACTCAATCGAATCAAAACCACCTGAATCAAACATCCACAGCATGTGTGTATACAATTCACCCCTTTATTGAAATATACTAGTACCtggacattaaaaatgtatcagtcCCTCAGTGTTAATGCATAACGCCGCTGAATCTGTTTGGTTTATTGAACGTCTGCCAGTTAAGTTTACTAGCTACCTGTGGTACTTCAGGAGCGTTATATGTCCACTGTAATCCATGATTAAATCATTTTGGATACGACAGGCAGCcacaattttataataataataataataataataaaaaagcaactcAAAATTGTGCAATTCAATAGGTtcttagaaataaaaacattgagcATTTTCAGAGAAGGTACAAGACAGACCACTGACTAAATGTCAAGTTTGTTTGTTAATAACACTACGTGACATTAAAAAAGACCACCATTTAAACATGATTCTCCGTTAAAAGAAACTTCAAACTGGTAGTAGGATTTATGAGAGGCTGTACAGTGTGCAAAATACTGTCCGTCACGGCAGGCACACCTAAATGATGCAGACATGCCCACAAAAACGGTGAAAGATCATGTTTTGAAGCAAAAGCTCTCACCAAGTCTTTTGTCTGACAGCAGGTATCATTTAAATCTGCCCACAAACACACGCCTTTAGTCTTCAGAGTACATGTGTCAACACAAAACTGCACTGCATCACCGACATAATCAGGCGCTTCCAGTTTGCTCATGACTTCCAGTaagattacataaaaaaatagcagAGAAAGATTCCTGGACATGTctgaaaagtgatttttttttgtttgtttttttagtttttgggtgaaaaacTTATATTGCGTGTTGAATATGTTGCTACAAAAGCATAATTCTTTCATGAGAAATATTGGAAAAATGTCAGGCAAAGAGAAGACCTTGTTGAGCACCGTATATTGTTTATACGTTTTTAAAACACCTTGATGGTTCATTATagtttatatcttatatatatttagtttagatCTTGTCTTAAGAAAAGACAAATTTTCGTGAGACTTTGCATGGAGTCCTAAGTGTATTTTTCCTGCTTGAGGCTGTGCATCTG

Function

GO: NA

KEGG:

id description
ko00515 Mannose type O-glycan biosynthesis

RNA

RNA id representative length rna type GC content exon number start site end site
TU171401 True 1229 lncRNA 0.36 2 25292211 25323742

Neighbor

gene id symbol gene type direction distance location
LOC122360523 rab5ab,LOC107688205,LOC107707637,LOC107716989,LOC100701272,LOC103038585 coding upstream 78424 25206296 ~ 25213787 (+)
decr1 decr1,LOC107704989,LOC107705494,LOC107756153,LOC107700707 coding upstream 114352 25172575 ~ 25177859 (+)
col6a4a LOC107704846,LOC107705786,LOC107588488 coding upstream 130565 25136936 ~ 25161646 (+)
sh3bp5b sh3bp5b,LOC107705532,LOC107588490,LOC107755668,LOC107700710,LOC107704986,LOC107556100 coding upstream 185752 25093181 ~ 25106459 (+)
sh3d21 LOC107588495,LOC107705578,LOC107700715,LOC107556095 coding upstream 272762 25007746 ~ 25019449 (+)
ube2e2 ube2e2,LOC103388353,LOC108256709,LOC103027361,LOC102233395,LOC108243292,LOC103357958,LOC108410980,LOC103477709 coding downstream 351968 25675710 ~ 25698512 (+)
nr1d2a LOC107568872,LOC107688200,LOC107707640,LOC107728981,LOC107671434,LOC107592106 coding downstream 380121 25703863 ~ 25712116 (+)
LOC122360719 NA coding downstream 428523 25752265 ~ 25774002 (+)
LOC122360721 NA coding downstream 453014 25776756 ~ 25778406 (+)
iglon5 iglon5,zgc:110372,LOC107671460,LOC107707642,LOC107733024,LOC106582734 coding downstream 573480 25897222 ~ 26069532 (+)
G116082 NA non-coding upstream 206846 25085022 ~ 25085365 (+)
G116072 NA non-coding upstream 221834 25067398 ~ 25070377 (+)
G116048 NA non-coding upstream 401649 24890275 ~ 24890562 (+)
G116043 NA non-coding upstream 405856 24885714 ~ 24886355 (+)
G116039 NA non-coding upstream 447081 24843422 ~ 24845130 (+)
G116136 NA non-coding downstream 377474 25701216 ~ 25701429 (+)
G116137 NA non-coding downstream 377741 25701483 ~ 25702533 (+)
G116143 NA non-coding downstream 407444 25731186 ~ 25731651 (+)
LOC122360700 NA non-coding downstream 458280 25782022 ~ 25788678 (+)
G116293 NA non-coding downstream 649921 25973663 ~ 26074410 (+)
G116057 NA other upstream 235043 25003262 ~ 25057168 (+)
LOC122360598 NA other upstream 459593 24773819 ~ 24832618 (+)
cnr2 LOC107716825,LOC107587892,LOC107704869,LOC107700673,LOC107597120 other upstream 1469765 23815924 ~ 23822446 (+)
tstd3 si:dkey-165n16.1,LOC107700689,LOC107704863,LOC107716817,LOC107587896,LOC107711730 other upstream 1679818 23609448 ~ 23612393 (+)
LOC122360149 LOC107704935,LOC107716843,LOC107587775,LOC107552833,LOC107700676,LOC107711721 other upstream 1933432 23274989 ~ 23358779 (+)
G116099 rab5a,LOC103388351,LOC105904716,LOC101157247,LOC108411561 other downstream 229121 25552863 ~ 25554807 (+)
G116141 usf2,LOC107688254,LOC107707624,LOC107671406,LOC107568863,LOC107552520 other downstream 394778 25718520 ~ 25778407 (+)
hmgn2 NA other downstream 888990 26212732 ~ 26215779 (+)
G116445 ubr5 other downstream 1517638 26841380 ~ 26842025 (+)
G116459 LOC102223539,LOC107092448,LOC103472369,LOC102305030,LOC102207943,LOC100703061,LOC104937165 other downstream 1571696 26895438 ~ 27171468 (+)

Expression


Co-expression Network