G116143


Basic Information

Item Value
gene id G116143
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056714.1
NCBI id CM032083.1
chromosome length 28146790
location 25731186 ~ 25731651 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU171471
AATAATCTgagattttatttgaaattttgcTTCTCTGTGCATGAACAATGATTCAGATTCATTTAGGATCGTGCGATTCATATTTCATCTTAAATGTGCATCTGTTTGGATAGAGACTAAAGAAGTCTTACAGAATCAGAATGTGGTGTATTTTATCTTTCTGCCAACTTACGCTGGTACAAAAACCTGTATATACATGTTTAGACACTTGAGTGTTTGTATGGGTTTCTGGAAAACATGCTCTTGCATTTTAGCGAGAACCGGCCACTCGGCGGCATTCGTGCATCCTGTAGGCACACATGTAAAATATacctgcaAAAAAAGGTCATGAGCAAAGCAACCCAGCCCAGAATGTAAGACCACGAGAAACGCCAGTCCCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU171471 True 380 lncRNA 0.40 2 25731186 25731651

Neighbor

gene id symbol gene type direction distance location
nr1d2a LOC107568872,LOC107688200,LOC107707640,LOC107728981,LOC107671434,LOC107592106 coding upstream 19070 25703863 ~ 25712116 (+)
ube2e2 ube2e2,LOC103388353,LOC108256709,LOC103027361,LOC102233395,LOC108243292,LOC103357958,LOC108410980,LOC103477709 coding upstream 32674 25675710 ~ 25698512 (+)
efhb efhb,LOC107671426,LOC107688256,LOC107743149 coding upstream 418888 25300259 ~ 25312298 (+)
LOC122360523 rab5ab,LOC107688205,LOC107707637,LOC107716989,LOC100701272,LOC103038585 coding upstream 517399 25206296 ~ 25213787 (+)
decr1 decr1,LOC107704989,LOC107705494,LOC107756153,LOC107700707 coding upstream 553327 25172575 ~ 25177859 (+)
LOC122360719 NA coding downstream 20614 25752265 ~ 25774002 (+)
LOC122360721 NA coding downstream 45105 25776756 ~ 25778406 (+)
iglon5 iglon5,zgc:110372,LOC107671460,LOC107707642,LOC107733024,LOC106582734 coding downstream 165571 25897222 ~ 26069532 (+)
LOC122360056 LOC107671413,LOC107733030,LOC107568859 coding downstream 389209 26120860 ~ 26125250 (+)
si:dkeyp-97a10.2 LOC107688197,LOC107568877 coding downstream 393725 26125376 ~ 26130807 (+)
G116137 NA non-coding upstream 28653 25701483 ~ 25702533 (+)
G116136 NA non-coding upstream 29757 25701216 ~ 25701429 (+)
G116101 NA non-coding upstream 407444 25292211 ~ 25323742 (+)
G116120 NA non-coding upstream 422255 25305761 ~ 25308931 (+)
G116082 NA non-coding upstream 645821 25085022 ~ 25085365 (+)
LOC122360700 NA non-coding downstream 50371 25782022 ~ 25788678 (+)
G116293 NA non-coding downstream 242012 25973663 ~ 26074410 (+)
G116294 NA non-coding downstream 338204 26069855 ~ 26073277 (+)
G116300 NA non-coding downstream 373367 26105018 ~ 26178239 (+)
LOC122359920 NA non-coding downstream 485282 26216933 ~ 26226095 (+)
G116099 rab5a,LOC103388351,LOC105904716,LOC101157247,LOC108411561 other upstream 176379 25552863 ~ 25554807 (+)
G116057 NA other upstream 674018 25003262 ~ 25057168 (+)
LOC122360598 NA other upstream 898568 24773819 ~ 24832618 (+)
cnr2 LOC107716825,LOC107587892,LOC107704869,LOC107700673,LOC107597120 other upstream 1908740 23815924 ~ 23822446 (+)
tstd3 si:dkey-165n16.1,LOC107700689,LOC107704863,LOC107716817,LOC107587896,LOC107711730 other upstream 2118793 23609448 ~ 23612393 (+)
hmgn2 NA other downstream 481081 26212732 ~ 26215779 (+)
G116445 ubr5 other downstream 1109729 26841380 ~ 26842025 (+)
G116459 LOC102223539,LOC107092448,LOC103472369,LOC102305030,LOC102207943,LOC100703061,LOC104937165 other downstream 1163787 26895438 ~ 27171468 (+)
cep72 spire1,LOC107677663,LOC107659090,LOC107729800,LOC107565753,LOC107601988 other downstream 1430550 27162201 ~ 27213635 (+)
G116460 NA other downstream 1432185 27163836 ~ 27168738 (+)

Expression


Co-expression Network