G116359


Basic Information

Item Value
gene id G116359
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056714.1
NCBI id CM032083.1
chromosome length 28146790
location 26071160 ~ 26128626 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU171803
atATCATAAACGCCAAACTTTAGATGAAAACACAACactttattgaaccttttctgataagaagtgtgcaaactcaagcatttttgaCGATCGTTTGAAGTGTTTTATCACAGCTGTCGTCGGTTTTATTGTCATGCAGCATacgatcatatttctaatttgaggctgtattacgCCGATTCTGGCACCCAGCGTCACAAGAAGTTGATCATTTTAGCTCCTTATGTAGCCGAGTGCGCCTCATTCTTCCCTGCTTCACATCCAGCTAGCGCCGTGACGTCGTTACATTCGATTGGCCTGATCGTGCGTCACTCagaaaaaacaggccaatcagaagagaggctcatgaatattaattagacagTCCAAAATCGAGCTGTTTTTGgaaaggagctgtaaaaacacatcgagatggtttttgttacttttaccacaatatatatatatatatatacac

Function

GO:

id name namespace
GO:0019538 protein metabolic process biological_process
GO:0030163 protein catabolic process biological_process
GO:0009056 catabolic process biological_process
GO:1901565 organonitrogen compound catabolic process biological_process
GO:0009057 macromolecule catabolic process biological_process
GO:1901575 organic substance catabolic process biological_process
GO:0044248 cellular catabolic process biological_process
GO:0044257 cellular protein catabolic process biological_process
GO:0044260 cellular macromolecule metabolic process biological_process
GO:0044265 cellular macromolecule catabolic process biological_process
GO:0044267 cellular protein metabolic process biological_process
GO:0006508 proteolysis biological_process
GO:0051603 proteolysis involved in cellular protein catabolic process biological_process
GO:0004175 endopeptidase activity molecular_function
GO:0004197 cysteine-type endopeptidase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU171803 True 457 lncRNA 0.40 2 26071160 26128626

Neighbor

gene id symbol gene type direction distance location
etfb etfb,LOC107688199,LOC107707641,LOC107728982,LOC107671471,LOC107552519 coding downstream 319060 25746565 ~ 25752100 (-)
vsig10l vsig10l,LOC107707630 coding downstream 326116 25735523 ~ 25745044 (-)
lim2.5 lim2.5,lim2,LOC102215845,LOC100699404 coding downstream 337578 25731193 ~ 25733582 (-)
nek10 nek10,LOC107728980,LOC107552505 coding downstream 342495 25712911 ~ 25728665 (-)
znf385d LOC107671428,LOC107592108,LOC107688204,LOC107716984,LOC107569797 coding downstream 444061 25568531 ~ 25627099 (-)
LOC122361084 LOC103367052,LOC103477771,LOC100706402,LOC102311978,LOC103139281,LOC101466533,LOC107379323,LOC107552522,LOC567622,LOC102231083,LOC108413244 coding upstream 5622 26134248 ~ 26173373 (-)
ago1 ago1,LOC108256363,LOC103040377,LOC102230823,LOC107379324,LOC103367053 coding upstream 48506 26177132 ~ 26204649 (-)
LOC122360601 LOC107671449,LOC107564094,LOC107671448,LOC107564095,LOC107688189,LOC107707648,LOC107552529,LOC107552527 coding upstream 112154 26240780 ~ 26246320 (-)
LOC122360605 LOC107688191,LOC107707651,LOC107552511,LOC107552530,LOC107671451,LOC107564104 coding upstream 121466 26250092 ~ 26251859 (-)
LOC122360602 LOC107726716,LOC107707650,LOC107552528,LOC107688189,LOC107564095,LOC107707648,LOC107552525,LOC107671450 coding upstream 131350 26259976 ~ 26263633 (-)
G116350 NA non-coding downstream 1626 26062291 ~ 26069534 (-)
G116282 NA non-coding downstream 292756 25776736 ~ 25778404 (-)
G116247 LOC107568872,LOC107688200,LOC107728981,LOC107592106,LOC107707640,LOC107671434 non-coding downstream 364364 25704700 ~ 25706796 (-)
G116264 NA non-coding downstream 375803 25694109 ~ 25695357 (-)
G116237 NA non-coding downstream 513142 25211393 ~ 25558018 (-)
G116360 NA non-coding upstream 1654 26130280 ~ 26130806 (-)
G116611 NA non-coding upstream 257172 26385798 ~ 26386007 (-)
G116633 NA non-coding upstream 491664 26620290 ~ 26678901 (-)
G116638 NA non-coding upstream 544298 26672924 ~ 26673379 (-)
G116647 NA non-coding upstream 610479 26739105 ~ 26739861 (-)
LOC122361130 LOC107568872,LOC107728981,LOC107671434,LOC107592106,LOC107707640,LOC107688200 other downstream 360474 25664719 ~ 25710686 (-)
serinc2l serinc2l,LOC107587884,LOC107704843,LOC107732828,LOC107755451,LOC107597105 other downstream 1597795 24414226 ~ 24473365 (-)
LOC122359997 LOC107732827,LOC107704842,LOC107587847,LOC107700682,LOC107756122,LOC107597135 other downstream 1701594 24364640 ~ 24369566 (-)
phactr4b phactr4b,LOC107587745,LOC107597106,LOC107700669 other downstream 1731372 24317482 ~ 24339788 (-)
mchr2a mchr2,si:dkey-165n16.5,LOC107587893,LOC107597140,LOC107700674,LOC107716821,LOC107711724 other downstream 2395815 23668065 ~ 23675345 (-)
G116604 slc9a1,LOC107688187,LOC107564092 other upstream 251046 26379672 ~ 26384187 (-)
LOC122360302 man1c1,LOC107713850,LOC107564091,LOC107665908,LOC107729795,LOC108426368,LOC101882461,LOC107601975 other upstream 293092 26421718 ~ 26507052 (-)
G116654 myom3,LOC107659064,LOC107729819 other upstream 678494 26807120 ~ 26809146 (-)
G116632 fabp10a,LOC107677662,LOC103026354 other upstream 681691 26810317 ~ 26812974 (-)
G116668 NA other upstream 745772 26874398 ~ 26876610 (-)

Expression


Co-expression Network