G116461


Basic Information

Item Value
gene id G116461
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056714.1
NCBI id CM032083.1
chromosome length 28146790
location 26927230 ~ 26958275 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU171969
tttttttttttttttTTACGtacttataataattttatattttggttccATGACACAATAATTTCGCACATATATAACTCTTCGAACACCAAATGTACACGACGTCACATTTATATTGCATCTTTGTaacactttttctctctcattttgtgtttgctCAAACGGACCACTGGTTCATTTCAAgaataaaaggttaaaaacacAGCTGTCCACGCACAATAATACCGATCACCGACATCAAATGGAGCTACTGCACGTCACAAAACATGAGTGGAATGACTTAAAACGCATCGTTTAGTTCACTTGCACATGTGATAACACAACGacatccttaaaaaaaaccaaaatgtaaacaaagtaCTAGGGGCGGCAGATATAGATGGTCTCCTGCGGTCAGTGGAGGAGTATCTCTGAATATGAATGAGCATGCATGGCCGGGTGACTGGAACGAGAGCTCAGCGatatacagtttaatttaatttattcacagAGAGCGAAGCGAAGGGCCACGTGGTTAAAAGCGCGTCTTCTACTTGAAGTCCAGGAGGTTGCAGTCGATCTTGTAGTACGCGTAGGGATAGTATTCTTGCTGGCTGAGGTTCAAGCCGGGGATGTCCATGGCGGATTGCTGGAAACGGGGGGGAAGAAGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU171969 True 650 lncRNA 0.41 2 26927230 26958275

Neighbor

gene id symbol gene type direction distance location
klf10 LOC107724995 coding upstream 48619 26871879 ~ 26878611 (+)
srsf10a srsf10a,srsf10b,LOC107724996,LOC107677658,LOC107601991,LOC107659087,LOC107729809 coding upstream 106013 26813702 ~ 26821217 (+)
fabp10a fabp10a,LOC107677662,LOC107601978,LOC107659084,LOC103026354 coding upstream 115034 26810797 ~ 26812196 (+)
myom3 LOC107729819,LOC107665907 coding upstream 119466 26745002 ~ 26807764 (+)
ifnlr1 NA coding upstream 188517 26726225 ~ 26738713 (+)
LOC122360881 NA coding downstream 99972 27058247 ~ 27069367 (+)
LOC122360882 LOC107720478,LOC107551709 coding downstream 147328 27105603 ~ 27110988 (+)
trip13 trip13,LOC107754445,LOC107677654,LOC107659068 coding downstream 299705 27257980 ~ 27265824 (+)
nkd2b LOC107754446 coding downstream 310707 27268982 ~ 27306063 (+)
zgc:158766 plekhg4b,LOC107569053,LOC107677642,LOC107729805,LOC107659069,LOC107601962,LOC107601963 coding downstream 368899 27327174 ~ 27376080 (+)
G116456 NA non-coding upstream 40666 26885461 ~ 26886564 (+)
G116437 NA non-coding upstream 98361 26828089 ~ 26828869 (+)
G116407 NA non-coding upstream 445416 26421704 ~ 26481814 (+)
G116403 NA non-coding upstream 539764 26387216 ~ 26387466 (+)
G116402 NA non-coding upstream 540035 26386798 ~ 26387195 (+)
G116462 NA non-coding downstream 706 26958981 ~ 26961403 (+)
G116432 azin1a,LOC107565755,LOC107677651,LOC107659088,LOC107729815,LOC107735878 non-coding downstream 20829 26979104 ~ 26981744 (+)
G116431 NA non-coding downstream 37662 26995937 ~ 26997644 (+)
LOC122361115 NA non-coding downstream 86396 27044671 ~ 27045625 (+)
LOC122361116 LOC107720478,LOC107551709 non-coding downstream 163300 27121575 ~ 27123779 (+)
G116445 ubr5 other upstream 85205 26841380 ~ 26842025 (+)
hmgn2 NA other upstream 711451 26212732 ~ 26215779 (+)
G116141 usf2,LOC107688254,LOC107707624,LOC107671406,LOC107568863,LOC107552520 other upstream 1148823 25718520 ~ 25778407 (+)
G116099 rab5a,LOC103388351,LOC105904716,LOC101157247,LOC108411561 other upstream 1372423 25552863 ~ 25554807 (+)
G116057 NA other upstream 1870062 25003262 ~ 25057168 (+)
cep72 spire1,LOC107677663,LOC107659090,LOC107729800,LOC107565753,LOC107601988 other downstream 203926 27162201 ~ 27213635 (+)
G116460 NA other downstream 205561 27163836 ~ 27168738 (+)
kif13a kif13a,LOC107677640,LOC107601961 other downstream 449802 27408077 ~ 27463052 (+)
G116572 rpz4,LOC107688231,LOC107592460,LOC107756901,LOC107671422 other downstream 874265 27832540 ~ 27840240 (+)

Expression


Co-expression Network