LOC122360878


Basic Information

Item Value
gene id LOC122360878
gene name NA
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056714.1
NCBI id CM032083.1
chromosome length 28146790
location 26993974 ~ 26998359 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU172373
ATTGATCATAATGAGTGATAAACGAGAGGTGCAGTGCTGCATCAGTGTGACACCCAAACCTAACCAGCCCGATTCAGACCGGAGATATTCAGAAGCTGTGGAGGCCCCGACGTCTATGAAGATCCAGCAGGAGTCTGGAAACGTCCAGCAGGGGGAGTTTTGGCCCTCGGCCCCTTCCTCCTGGGCCTGCGATCCCGTCCCTGCTGATTTCCACCAGAACACCTTTGTGAATGAGACGGGACACAAAGGGCAATCTCACAAACAGATCcagGAGAAGTCACGCAGAACCGCACCGAACGGcccggggtcagaggtcacggcTTCTCGAGCGGTCAGCGTGATCCGCACACGTCAGGACGCAGAGACGTGTCTCCCATCGCCCCTGCTCCGGCGAGCTCGGGGCCCGTGCTGCTCGTGGCCAGGGCTTCGGTCGTGGTGATTCTGCCCCTGAAGCAgacggcggcggcggcggcgtccGGTTTGAGGTTCACGGCCATCGCTCCGGCTCCCGGCAGCGTCCCGACCGCAAACAGAGCCGCTCCGCCTCGGCCCCGCGAGCACGTCTGCTCTCATCCTGACTGCGGCAAAACATACTTCAAGAGCTCCCACCTCAAAGCGCAcctgagaacacacacagGTGAGAAGCCGTTCAGGTGCTGCTGGGACGGCTGCTCGCGGCGCTTCGCCAGGTCTGATGAACTGTCTCGCCATCGGCGCACGCACACGGGAGAGAAGCGCTTCTCCTGCCCCGCTTGTCAAAGCCG
>XM_043261716.1
ATGAGTGATAAACGAGAGGTGCAGTGCTGCATCAGTGTGACACCCAAACCTAACCAGCCCGATTCAGACCGGAGATATTCAGAAGCTGTGGAGGCCCCGACGTCTATGAAGATCCAGCAGGAGTCTGGAAACGTCCAGCAGGGGGAGTTTTGGCCCTCGGCCCCTTCCTCCTGGGCCTGCGATCCCGTCCCTGCTGATTTCCACCAGAACACCTTTGTGAATGAGACGGGACACAAAGGTAACAGAAGCGGTGGTATCTTCTCAGGAGAAGTCACGCAGAACCGCACCGAACGGcccggggtcagaggtcacggcTTCTCGAGCGGTCAGCGTGATCCGCACACGTCAGGACGCAGAGACGTGTCTCCCATCGCCCCTGCTCCGGCGAGCTCGGGGCCCGTGCTGCTCGTGGCCAGGGCTTCGGTCGTGGTGATTCTGCCCCTGAAGCAgacggcggcggcggcggcgtccGGTTTGAGGTTCACGGCCATCGCTCCGGCTCCCGGCAGCGTCCCGACCGCAAACAGAGCCGCTCCGCCTCGGCCCCGCGAGCACGTCTGCTCTCATCCTGACTGCGGCAAAACATACTTCAAGAGCTCCCACCTCAAAGCGCAcctgagaacacacacagGTGAGAAGCCGTTCAGGTGCTGCTGGGACGGCTGCTCGCGGCGCTTCGCCAGGTCTGATGAACTGTCTCGCCATCGGCGCACGCACACGGGAGAGAAGCGCTTCTCCTGCCCCGCTTGTCAAAGCCGCCGCGGCGCCAGCGACCATCTGGCCAAACACGCCCGCCGCCATCTATCTGCTCGGAGGACGCCGGCGTGGAAGAAGGAGGTCTACCGTCTGAACGGCATCAGCGGCGTCGTCACCTGCAGCCTCTGGCTCCAAAAGCAAGAGCTGACAAACTCCTTCGcgcctcctatatatatatagatatgtgaCGGTCTT

Function

GO:

id name namespace
GO:0006414 translational elongation biological_process
GO:0005901 caveola cellular_component
GO:0044853 plasma membrane raft cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU172373 False 764 TUCP 0.62 4 26994167 26998359
XM_043261716.1 True 951 mRNA 0.62 4 26993974 26998349

Neighbor

gene id symbol gene type direction distance location
LOC122361111 atp6v1c1a,atp6v1c1,LOC107601989,LOC107729816,LOC107659089,LOC107565754,LOC107724997 coding downstream 24034 26957641 ~ 26969940 (-)
LOC122360494 LOC107677651,LOC107565755,LOC107729815,LOC107601969 coding downstream 105075 26878671 ~ 26888899 (-)
ubr5 ubr5,LOC107677650,LOC107659085 coding downstream 125003 26822157 ~ 26868971 (-)
fam110d si:ch211-107n13.1,LOC107688188,LOC107707635,LOC107726719,LOC107564093,LOC107552531,LOC107671482 coding downstream 679129 26299517 ~ 26314845 (-)
LOC122360092 LOC107688189,LOC107564095,LOC107707648,LOC107671448,LOC107552527,LOC107726716,LOC107552528,LOC107671449 coding downstream 720283 26270993 ~ 26273691 (-)
LOC122361113 NA coding upstream 77145 27075504 ~ 27078615 (-)
spire1b spire1,LOC107565753,LOC107677663,LOC107601988,LOC107659090 coding upstream 182278 27180637 ~ 27204293 (-)
LOC122361070 tppp,LOC107659066,LOC107677661,LOC107565752,LOC107754442,LOC107601987 coding upstream 215731 27214090 ~ 27228568 (-)
zdhhc11 NA coding upstream 231427 27229786 ~ 27242739 (-)
brd9 brd9,LOC107754443,LOC107659091 coding upstream 244523 27242882 ~ 27258010 (-)
G116666 NA non-coding downstream 119614 26817032 ~ 26874360 (-)
G116670 srsf10a,srsf10b,LOC107724996,LOC107677658,LOC107729809,LOC107659087 non-coding downstream 175126 26816120 ~ 26818848 (-)
G116648 NA non-coding downstream 250185 26741576 ~ 26743789 (-)
G116647 NA non-coding downstream 254113 26739105 ~ 26739861 (-)
G116638 NA non-coding downstream 320595 26672924 ~ 26673379 (-)
G116696 NA non-coding upstream 154987 27153346 ~ 27213613 (-)
G116700 NA non-coding upstream 156736 27155095 ~ 27157490 (-)
G116710 NA non-coding upstream 240627 27238986 ~ 27240139 (-)
G116711 NA non-coding upstream 242256 27240615 ~ 27241091 (-)
G116721 NA non-coding upstream 301135 27299494 ~ 27307565 (-)
G116677 NA other downstream 38140 26954220 ~ 26955834 (-)
G116668 NA other downstream 117364 26874398 ~ 26876610 (-)
G116632 fabp10a,LOC107677662,LOC103026354 other downstream 181000 26810317 ~ 26812974 (-)
G116654 myom3,LOC107659064,LOC107729819 other downstream 184828 26807120 ~ 26809146 (-)
LOC122360302 man1c1,LOC107713850,LOC107564091,LOC107665908,LOC107729795,LOC108426368,LOC101882461,LOC107601975 other downstream 486922 26421718 ~ 26507052 (-)
G116745 plekhg4b,LOC107569053,LOC107659069,LOC107601962,LOC108426379,LOC107729806 other upstream 360348 27358707 ~ 27360829 (-)
LOC122360079 NA other upstream 521831 27520190 ~ 27579866 (-)
LOC122359885 rab25b,LOC107756889,LOC107592474,LOC107688282,LOC107671436,LOC107592134 other upstream 624270 27622629 ~ 27627660 (-)
G116836 rpz,LOC107688232,LOC107592467,LOC107728474,LOC107726667,LOC107671398 other upstream 709357 27707716 ~ 27804770 (-)
G116868 NA other upstream 965129 27963488 ~ 27964958 (-)

Expression


Co-expression Network