kcnv1 (kcnv1,si:dkey-201i6.2,LOC107717377,LOC107666889,LOC107668317,LOC107713815)


Basic Information

Item Value
gene id kcnv1
gene name kcnv1,si:dkey-201i6.2,LOC107717377,LOC107666889,LOC107668317,LOC107713815
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056714.1
NCBI id CM032083.1
chromosome length 28146790
location 21147757 ~ 21157049 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043260165.1
GCGCGCGCATCCAAACGTAGATCTCGTGACAGCGAAGGCtttgatttttccagacgatTACAACGCgtctaattttttttactggttGTATTAAGTGTCTGGAGTTTGTTGCCTAGCAGCCTGAAGATgtcttctgattggttgatagCTCGCACTCTCTCCAGCGCGAGTTAAAACGCTCGTGAAAGGTGCGCGAGCGCGCTTCAGAACTGTTCCGAACTCCGGTGAACCTCTGAAACCGAGAGCGGCATCGCTTCTTCACTGAAAACATTTCGGAACATTCGGGTTGCATTATGTACTTCAGTTTATCGACAGAGGAGCAACATCTTCTGAAGTGGGAACAGGGTAAAGAGACAGATGGATCCAGCTCACCTCACAAAAGCGCACAAGCTTTCAGTGTAGGCTTATAGACTGAAGGGCTCACCATGATCACGGATTCATCAAGTCCGGCAGAGTTCTACGAGGACAACGCATCGCTGCTGTCCTTGGACTCTAGCGTGTTCTTCAGCGAGCCTGCGCTGCCGAGCGACGACCCACTGGACTTCTTCATCATAAATGTTGGAGGCAGCCGCTACATCCTCTCTCAGGAACTGCTGGCCTCTCACCCAGAGACTCGCCTGGGCAAGCTGGCGCTCTCCAACCGAGACTCTGCTTTAGATCTGTGCGATGATGCAGATTTCTTGGAGAACGAGTTTTTCTTCGACCGCAACTCGCAGACCTTTCAGTACATCATGAACTTCTACAAGACCGGCCGCTTGCATGTGCGAGAGGAGCTGTGTGTGATCTCGTTCCTCCAGGAGATCGAGTACTGGGGCATCGATGAGCTCCGCATTGACAGCTGTTGCAGGGACAAGTACTACCGTAGGAAAGAGATGAAGGAGTCGCTGGATATCCGTAAGGATGCTGATGTAATTGACAACGAAGAGGAGGACTTCACCGGCGTTTTGTGCCAGGACTTACGCCAACGTCTATGGGACCTTATGGAGAAGCCGGACTCTTCTAAGGCAGCCAAGACGTTTGGGACGCTATATGTTTTTGTGGTGGTGTCCATCGTGAACATGGCTCTGATTTCGCTGGACTTCACTATACTTGGTGCACCCATCATCTTGGACGCTCTTGAGTACATTTGTATCATTTGGTTCACCGGTGAGCTGGTGCTCAGGTTCATGTGTGTTAGAGATAAGTGTAGGTTCAGCAGGAGTGTGGTGAATATCATTGACCTGCTGGCTATTCTGCCCTTCTATGTGACTCTGGCCGTGGAGAGCCTTCATGGAGGATCTACGGAGCTGGAGAATGTTGGTCGGGTAGTTCAGGTGCTACGGCTAATGAGGTCTCTCAGGATGCTTAAACTTGGCCGACATTCAACAGGCCTTAAGTCTTTGGGAATGACGATCGCCCAATGCTACGAGGAAGTTGGCCTCCTGATGCTATTCCTTTCTGTAGGCATCTCCATCTTCGCCACAGTGGAATACGCCATCGAACACGACATTCCAGAGACCACCTTCACAAACGTGCCCAGCGCATGGTGGTGGGCCACCACGTCCATGACCACAGTAGGGTACGGAGACATCCGTCCGGACACGGCCCTGGGAAAGGTGATGGCCTTCATCTGCATCCTATCCGGCATTCTTATTCTCGCTCTGCCTATCGCCATCATCAACGACCGCTTCTCTGCCTGCTACTTCACGCTCAAAATGAAAGAAGCGGCGCTGAGGCACGGGGAGGCGCTGAAGCGACTGACACGCAGCTCGGCCTCGGATATGTCGGCGATAGGGGTGAACCTGCGGGACGCCTACGCCAGAAGCGTGCTGGAGATGCTGCGGTTGCAGGGGCGAGAGCGAGCCAGCACACGCAGCAGTGCAGGAGATCTTTGGTGGTAGAAGTAAGCTTGCAAGCtaccggagagagagagacagataaagaATAAGTGAGCGTCTTTTAAGGACCGCAAATCCTTTAAAGGCCTCATATCACGAGTGGTCAAAATTTGCTTGATCTTTAGAGTTTTATTCATTAGGAAAACTTGCCTCAAAACATTTTTCGACCAtactgcaaaaacaactgaACGTTCACATGTTTCTGATGTCACAAATTTTATTTTGCGATTCTGTAACAATCTAATACAGCTTTCCAAAGTGGCTAAAGTGGTAAAACTGTATTACAAATGAGTGCAAACCTGCAGCTTGCAGACAAAATGGTGCTGCTAATTTCACATACAAATGGGGCATTTGATTATGTTGCAATATAATGGAAGTAGCAACAGATCTTTTCTTCCATACTGTGATGTACATTCATTGGGGACTTGGTTCAGTTGTTGATTGGATAAAGGCAGCTGTACATGTAAACTTGCAGTCAATTTTTAGAAAGAGGCATggtttaaatggatagttcacccaaaaatggcaattctgtcatcatttacgctctcatgttgttccaaatctgtatgacttctgtggaacatattttgaattgatattctgaagaatgctCATGGCCAAACAGGTTTTGTTTCTATTgactttacaaaaaatacaaatgaaatcaGTGTGAACCAAAATTGTTTGGTTGCAAGTAGTCAGAATATCTTCTAAAGAGCATGAGGGTGAGTCATGATAagacattttgatttaaaaaaaaaacataaataatgaatgaatgaatgaatggttcACAGTAAgatcaataacatgcatttagaaaatagatTGCTTGATTTTCCATTTCAtaccaacagcagcagcaaaagCAGAATGGAAATGATCTTAAAATCTACTACAActgttaatataaattataaattttaaattgttattattacatttacatttacatttacatttagcagacgcttttatccaaagcgacgtacaaatgaggtaggcaatagaagcaattaatgTCAACAAAAGGGCAGTATGATGATCTGAAATAGCTTCAAATGATCTTTTATCAGTGGCCACACATAATGCAGCACTGTCATCCttctgtattataataataaaaaaaaaaaaaataaaaacattgaacctcagggaaaaaaacaattaaagacAAAAGTATTTTATGACTTCTTTTTAGGGTGAAGTGCGTGATTTCTTCACAACTAGTGGCACAAAACAAATTAGCAAAAATTAAGACTTTACTTAAACAGGTTTCCCAATCACCGCCATTGGCTGGACAACAGTTAACCCTGCCCGAATCTCGCACCATTAGCTAAAACAATGGTGTTATACTGCTTAAAAGAATCAACTGAATCAACTTgcaaattactttaaattgtcTCTAGACATTAAGCTGGTATTTTAACATGAAATTACAATcatgaacattattttttaaaaattgctacATGCCTGTTCTGTTCATCTTTGTGCAACTCATTGATTGTTTGTAATATAAGTAGTTTTTACTGTTCCATTTGAAGATATGTAATAAAATCTATGTCTG

Function

symbol description
kcnv1 Predicted to enable voltage-gated potassium channel activity. Predicted to be involved in potassium ion transmembrane transport. Predicted to act upstream of or within several processes, including potassium ion transport; protein homooligomerization; and regulation of ion transmembrane transport. Predicted to be located in membrane. Predicted to be part of voltage-gated potassium channel complex. Predicted to be integral component of membrane. Orthologous to human KCNV1 (potassium voltage-gated channel modifier subfamily V member 1).

NR:

description
potassium voltage-gated channel subfamily V member 1

GO: NA

KEGG:

id description
K04934 KCNV1, KV8.1; potassium channel subfamily V member 1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043260165.1 True 3450 mRNA 0.44 4 21147757 21157049

Neighbor

gene id symbol gene type direction distance location
ptpn23a ptpn23a,ptpn23,LOC107666802,LOC107717372,LOC107668297 coding upstream 30067 21107087 ~ 21117690 (+)
cmtm6 LOC107717369,LOC107600546,LOC107666873,LOC107668282,LOC107713799 coding upstream 363316 20778080 ~ 20784441 (+)
cmtm7 cmtm7,LOC107666776,LOC107717357,LOC107668286,LOC107600545,LOC107592881,LOC107713818 coding upstream 373379 20770464 ~ 20774378 (+)
LOC122361050 LOC107717367,LOC107666876 coding upstream 383410 20759368 ~ 20764347 (+)
rpp25l rpp25l,LOC107666877,LOC107600503,LOC107717368,LOC107713839,LOC107592013,LOC107668321 coding upstream 388525 20756995 ~ 20759232 (+)
si:dkey-22o22.2 si:dkey-22o22.2,LOC107666790,LOC107717379,LOC107668308,LOC107592533,LOC107713796,LOC107600533,LOC108437325,LOC108272818 coding downstream 53803 21210852 ~ 21314454 (+)
ndufaf6 ndufaf6,LOC107717382,LOC107591959 coding downstream 189608 21346657 ~ 21354616 (+)
plekhf2 plekhf2,LOC107666819,LOC107600513,LOC107668314,LOC107591926 coding downstream 208290 21365339 ~ 21378842 (+)
LOC122360960 NA coding downstream 235793 21392842 ~ 21405824 (+)
si:dkey-29b11.3 LOC107730210,LOC107600552,LOC107668293,LOC107713830,LOC107567766,LOC107668280 coding downstream 494459 21651508 ~ 21654059 (+)
G114983 NA non-coding upstream 5727 21141042 ~ 21142030 (+)
trnae-cuc_37 NA non-coding upstream 8805 21138881 ~ 21138952 (+)
LOC122360615 scap,LOC107666822,LOC107600505,LOC107668298,LOC107591983,LOC107717374,LOC107713836 non-coding upstream 15652 21129128 ~ 21132105 (+)
G114978 NA non-coding upstream 27225 21118149 ~ 21120532 (+)
LOC122360417 NA non-coding upstream 218316 20928702 ~ 20929441 (+)
G115020 gbp,LOC107666878,LOC107717378,LOC107600509,LOC107668283,LOC107713814 non-coding downstream 10945 21167994 ~ 21169353 (+)
G115074 NA non-coding downstream 233732 21390781 ~ 21391162 (+)
G115134 NA non-coding downstream 536445 21693494 ~ 21694544 (+)
G115157 NA non-coding downstream 671167 21828216 ~ 21829531 (+)
G115200 NA non-coding downstream 839961 21997010 ~ 22001617 (+)
siglec15l NA other upstream 377365 20767278 ~ 20770392 (+)
slc4a7 slc4a7,LOC107666816,LOC107686077 other upstream 843073 20267541 ~ 20304684 (+)
hjv hfe2,LOC107719159,LOC107666758,LOC107714319,LOC107592274 other upstream 920680 20219644 ~ 20227077 (+)
LOC122360533 dcstamp,LOC107556953,LOC107592504 other upstream 1499951 19643829 ~ 19647806 (+)
G114382 NA other upstream 1818994 19327104 ~ 19328763 (+)
tgfbr2b tgfbr2,LOC107730143,LOC107600517,LOC107551196,LOC107713826 other downstream 692940 21849989 ~ 21872972 (+)
stt3b stt3b,LOC107668300,LOC107666808,LOC108434203,LOC107713794 other downstream 726860 21883909 ~ 21921531 (+)
G115193 NA other downstream 820068 21977117 ~ 21979368 (+)
LOC122359863 aldh5a1,LOC107704994,LOC107705391,LOC107700704,LOC107588482,LOC107755744,LOC107556105 other downstream 1752486 22909535 ~ 22915477 (+)
LOC122360067 calb1,LOC107704882,LOC107588486,LOC107556079,LOC107700706,LOC106580458 other downstream 1807520 22964569 ~ 22975774 (+)

Expression


Co-expression Network