mettl6 (mettl6,LOC107600537)


Basic Information

Item Value
gene id mettl6
gene name mettl6,LOC107600537
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056714.1
NCBI id CM032083.1
chromosome length 28146790
location 21409959 ~ 21411772 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043260351.1
gtttctttatcgcCGCAGTAGCTTTTGCTCGAGTTAGACAGATGCTAAGTATATGCACGACAACATGCTGCGTTTTAAAACCACATTAAACATGCGGATATTTTACTCTTAATCATTTCGCAGGTTTAACATATATGTGGTTTAAGCGCATAGGTGTACCTGAAACCGTGTTTTACTAAACGCAAAGTGCTGTGTCTGTCACTATCGTAGAACTTCACAGCATCTTGTTTTAAGTCGTTTTCGGCAGTCATGTCGGTGACAGGTGAGTCGGACTCGCTGGAATCCAGTCCTGCTTCTCCCCATCAGTCCAGCGGTTTGAGCGAAAGGACCCTGACTCCAGAGGAGCTGGAGAAACTCAGGAGTGACCGCGTCTTAGTGTCCGACTTTAAGCAGCAGAAACTCGAAGTGGATGCTCAGAAGAACTGGGActtgttttataaaagaaacACGACACACTTTTTTAAAGACCGGCACTGGACTACCAGAGAGTTTGAAGAGCTGAAAAACTGCAGGGAGTCTCAGGGGCAGAAGCTGGTGTTATTGGAGGCTGGCTGTGGGGTGGGAAACTGCATTTTCCCTCTTCTGGAAGAAGATCTCAATATCTTCATCTATGCTTGTGACTTCTCTCCACGAGCTGTGGAGTTTGTGAAGcaAAATGCCTTGTATTGCCCCGAGCAATGCCTTGCGTTTCAGTGTGACCTCACTCAAGATGATCTCCAGGCCACAGTACAAGTGGAGACAGTGGATGTAGCCACTTTGATATTTGTTCTGTCCGCAATTCATCCTGAAAAGATGCAGAAGGCCCTGGAACACATTTATAAGGTGTTGCGACCAGGAGGTATTGTCCTCTTCAGGGACTATGGATTGTATGATCATGCCATGTTGAGGTTTAAGTCGGGCAATAAGCTGGGTGAGAATTTCTATGTGCGACAGGATGGGACCCgttcttttttcttctcaaagGAGTGCCTGGCTGGTTTGTTCCAAAAGGCAGGATTCGAGACTCTAGTGAACGAGTATGTGTTGAGAGAAACTGTGAATAAAAAAGAGGGTCTTTGTGTTCCCAGAGTGTTCCTGCAGAGTAAATTTCGCAAACCTATTCCATCATTATCACCAGCATAAgtcacatttttgtaaatgtatttttcgaAGTggcatgcattcatttattgtatttcagatacaatatttttagtcagatgttattttttactactaataaaatgtgtattttattaaaaaactgttggtttaattgattttttttttttaagttatgtgctcatttttaatgttcattttgtgAGTTGCCTTGCATGAGCTCCCTGGTGGTCTAGTGGTTAGGATTCGGCGCTCTCACCGCCGcggcccgggttcgattcccggtcaGGGAAC
>XR_006252759.1
tgtttctttatcgcCGCAGTAGCTTTTGCTCGAGTTAGACAGATGCTAAGTATATGCACGACAACATGCTGCGTTTTAAAACCACATTAAACATGCGGATATTTTACTCTTAATCATTTCGCAGGTTTAACATATATGTGGTTTAAGCGCATAGGTGTACCTGAAACCGTGTTTTACTAAACGCAAAGTGCTGTGTCTGTCACTATCGTAGAACTTCACAGCATCTTGTTTTAAGTCGTTTTCGGCAGTCATGTCGGTGACAGGTGAGTCGGACTCGCTGGAATCCAGTCCTGCTTCTCCCCATCAGTCCAGCGGTTTGAGCGAAAGGACCCTGACTCCAGAGGAGCTGGAGAAACTCAGGAGTGACCGCGTCTTAGTGTCCGACTTTAAGCAGCAGAAACTCGAAGTGGATGCTCAGAAGAACTGGGActtgttttataaaagaaacACGACACACTTTTTTAAAGACCGGCACTGGACTACCAGAGAGTTTGAAGAGCTGAAAAACTGCAGGGAGTCTCAGGGGCAGAAGCTGGTGTTATTGGAGGCTGGCTGTGGGGTGGGAAACTGCATTTTCCCTCTTCTGGAAGAAGATCTCAATATCTTCATCTATGCTTGTGACTTCTCTCCACGAGCTGTGGAGTTTGTGAAGcaAAATGCCTTGTATTGCCCCGAGCAATGCCTTGCGTTTCAGTGTGACCTCACTCAAGATGATCTCCAGGCCACAGTACAAGTGGAGACAGTGGATGTAGCCACTTTGATATTTGTTCTGTCCGCAATTCATCCTGAAAAGATGCAGAAGGCCCTGGAACACATTTATAAGgcAGGTGTTGCGACCAGGAGGTATTGTCCTCTTCAGGGACTATGGATTGTATGATCATGCCATGTTGAGGTTTAAGTCGGGCAATAAGCTGGGTGAGAATTTCTATGTGCGACAGGATGGGACCCgttcttttttcttctcaaagGAGTGCCTGGCTGGTTTGTTCCAAAAGGCAGGATTCGAGACTCTAGTGAACGAGTATGTGTTGAGAGAAACTGTGAATAAAAAAGAGGGTCTTTGTGTTC

Function

symbol description
mettl6 Predicted to enable methyltransferase activity. Predicted to act upstream of or within methylation. Orthologous to human METTL6 (methyltransferase 6, methylcytidine).

NR:

description
PREDICTED: methyltransferase-like protein 6

GO:

id name namespace
GO:0032259 methylation biological_process
GO:0008168 methyltransferase activity molecular_function

KEGG:

id description
K00599 METTL6; tRNA N(3)-methylcytidine methyltransferase METTL6

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043260351.1 True 1395 mRNA 0.44 5 21409959 21411771
XR_006252759.1 False 1068 transcript 0.46 5 21410291 21411772

Neighbor

gene id symbol gene type direction distance location
trnas-aga_117 NA coding downstream 934 21408944 ~ 21409025 (-)
cfap418 LOC107666820,LOC107668311,LOC107592823,LOC107600550,LOC107591919 coding downstream 991 21405263 ~ 21408968 (-)
LOC122360424 LOC107666780,LOC107717381,LOC107600549,LOC107713810,LOC107591947,LOC107668291,LOC101885642 coding downstream 44758 21360793 ~ 21365201 (-)
nagpa nagpa,LOC107591935,LOC107668288,LOC107666791,LOC107717356,LOC107600512,LOC107713811 coding downstream 63359 21333650 ~ 21346600 (-)
tp53inp1 tp53inp1,LOC107666795,LOC107717380,LOC107600511,LOC107591975,LOC107668322 coding downstream 79968 21322911 ~ 21329991 (-)
rspo3 rspo3,LOC107666888,LOC107713808,LOC107600514,LOC107591889 coding upstream 1096 21412868 ~ 21431807 (-)
trmt11 trmt11,LOC107668323,LOC107713829,LOC107567767,LOC107730191,LOC107666854,LOC107600515 coding upstream 228325 21640097 ~ 21651111 (-)
hint3 hint3 coding upstream 242547 21654319 ~ 21656720 (-)
osbpl10b osbpl10,LOC107600617,LOC107713824,LOC107551176,LOC107705753,LOC107668315 coding upstream 511190 21922962 ~ 21961491 (-)
kiaa1143 kiaa1143,zgc:77056,LOC107713807,LOC107600662,LOC107551194,LOC107679647 coding upstream 557065 21968837 ~ 21970707 (-)
G115098 NA non-coding downstream 20812 21388815 ~ 21389147 (-)
G115051 NA non-coding downstream 78601 21331012 ~ 21331358 (-)
G115042 si:dkey-22o22.2,LOC107668308,LOC107713796,LOC107592533,LOC107666790,LOC107717379,LOC107600533 non-coding downstream 95213 21283464 ~ 21314746 (-)
G114997 NA non-coding downstream 289375 21118149 ~ 21120584 (-)
G114947 NA non-coding downstream 574724 20781803 ~ 20835235 (-)
G115155 NA non-coding upstream 413426 21825198 ~ 21825437 (-)
G115170 NA non-coding upstream 462054 21873826 ~ 21874051 (-)
G115262 NA non-coding upstream 818468 22230240 ~ 22237066 (-)
G115335 NA non-coding upstream 1271655 22683427 ~ 22683638 (-)
G115496 NA non-coding upstream 1361994 22773766 ~ 22774032 (-)
G115093 plekhf2,LOC107666819,LOC107600513,LOC107668314,LOC107591926 other downstream 31123 21375890 ~ 21378836 (-)
G115003 cpne4a,LOC107592564,LOC107600547,LOC107666882,LOC107713817 other downstream 392854 21012607 ~ 21017105 (-)
G114901 NA other downstream 756385 20651977 ~ 20653574 (-)
scn1ba scn1b,scn1ba,LOC107666845,LOC107737825,LOC107719111,LOC107686587 other downstream 759022 20636125 ~ 20650937 (-)
G114793 NA other downstream 957509 20441965 ~ 20452450 (-)
G115116 NA other upstream 148449 21560221 ~ 21561216 (-)
cenpw cenpw,LOC107600551,LOC107668290,LOC107666774,LOC107567752 other upstream 194186 21605958 ~ 21614203 (-)
G115141 NA other upstream 292246 21704018 ~ 21704959 (-)
G115149 NA other upstream 389703 21801475 ~ 21803804 (-)
G115207 gpd1l,LOC107705153,LOC107713825,LOC107551192,LOC107666803,LOC107600618,LOC108434205 other upstream 553083 21964855 ~ 21968535 (-)

Expression


Co-expression Network