aste1a (LOC107666773,LOC107717364,LOC107600542)


Basic Information

Item Value
gene id aste1a
gene name LOC107666773,LOC107717364,LOC107600542
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056714.1
NCBI id CM032083.1
chromosome length 28146790
location 20736949 ~ 20741672 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043260711.1
CTGTTTTAGATAAAAAGATGCGCAACGTATTCGGAGACATGAAGCTCGAAGACGACCCGCAAGCATTTCTACACAACCGcAAGTGTAGACCAAAATATTACTGGGAGTTAGTGACATAACTTTGTCAACATGGGAGTCCAAGGACTGAAGACCTTCATTGAGAGTAGCAACAGAAATGCTTTAAGAAGCTGGGCTTTTAGAGATACTCGACTAATAATCGATGGATGTAACTTATACTACACCCTGTATTTTGACTGCGATTTGGATCAGATGCACGGAGGAGATTATGATGACTTTGAGGAGGTGATCATCATGTTCTTTGAGAACCTCAGAGAGTGTGACGTTCAACCTTACGTTGTACTTGATGGCGGCGCTGACCACACTGACAAAAAATGGGACACTCTTAAGAAACGAAAACaggagaaaataaatgcagcctgtgCCTTGTCAGCAGGGAAAAGAGGCAAGGTCCTTCCTATTCTCGCCAAAAATGTCTTCAGGCAGGTCCTTCATAAGCTCAAGGTACCGCTCATTCAGTGTATTGAAGAAGCCGATTGGGAAATCGCTGCTTTGGCGCAAGAATGGAATTGTCCAGTTTTGTCCAACGACAGCGACTTCTTTGTATTCAAGCTCAGGGCGGGATTCCTGCCCATCACGCAATTCCAGTGGAAAAACGTGAAAGTGAACAGACGCACAAACCAAAAATTCATCCAAGCCAAACACTACACAGTGGGAAAATTCTGCGAGTCCTTCGAGATGAACCCTGAGCTTTTCCCAGTTTTCGCTACCATCTTGGGTAATGATTATGTGAAGCTGCAAAATATCAAAAGCTTGGACTGGGAGAAATACTCAACGCCTGACATGGAGCATGCCCAAATTCATGGTTTGCTTAACTGGTTATCTCAGTTCCCAAAGCGAGATGCAGCTGTAAGTGCTTTGCTGAAACTAACACACAACAAAGAAAAACCCCTTGTCCAAGAAGCGCTATCCAAGGGAATCCAAGAGTACAAGCTCATCCCTGGCTATCTTGCTCAGTGCTTTCACTCAAAGACGATTCCAAGCATAGCTTCTAAAGGTCCACTGCAAGTTCTGCCTAAATGGACCTTGGAGCTCCTACTTGAGGGAAAGATGTGCTCTTCCATTATCGATGCACTGTTACATAAAAGGGTTTCCTTGGCAATCCAGGTTGAAGATTTCCAACTGGCCAGTAGCAGTGAAACCTCTCGTCCAATACGTCAGGTGATTTATGGGTTACTGTTGGGAGAACAACAGAGTGCACCTGTTAAAACATTCACTCACGCAAGCAAGCAGTATGTAGAGGAATATGGCAGGCAGCAATCAACACTAAGCAGTGAGAAAGTTGAAGCCATACAGACAAGGGTGATTGAAGGACTTCAACTGAAAAGATTATTCAAGGAACCATGCAACGTGCGACTTCAGGTGCTCCTGGACACTTTGGGTGTTTTGTCAGAGACATATACAGAGATTCAACCTGCTCTACAGCTGCAGCTTTTCGTGACACGTTACTGGCTATTGAACGCACAACCTCCGCCGTCCAAGGAGCATCTTTGGGGGCTACTACTGGGAATGGTCTATGGACAGTTAAGCAGTACACCTCAAACTCAAAGAGacaTGCTGTTGAAACTTAAGAAACTACAAACCGGTCGAAAGGTCTTTCTGGAGCATAAAACGGCTCATCTATACAGCCAGTGGCAGTCCTGCCTGAAGTGGAGTCTCTGTCTCAATCGCTTACTGTATTTTCCTGTATCTGAACCAGAGGTTGCACGTTTGTACCGTGGAAAACTGGTGCACCAGATTGTTGAAGAGCTCTGGAGAGGAATCACTCTGCACTCTCTGCTGGTGAAGGGTTCAAACATCGAGCGGCTCTTCAAAAAGCTGAAGGATGCAGTTGTGAGCTTGATGGGAGAAGACTTCATCAAGAAAATGAGAACAGCCGAGCACAGAGCTGCTGGGAAAACACAGAGAGACTGCAAGAGTCAGAATCTGCTCGTAGATGAACTGAGCAATGGCTTCGAACTTCTGATGTTTGAGGATAATGATGACGGTGAAGATGACGATGATCTCAATGAGAAAAGGAGGAAGAATAAAGCAAAGGATCACAAAGCTGAAATTCCTGATGTTTCCTACACCATCCGTACCAGACACAAGGCTAAAGCTCGCAATGCTGATCATCCCTCTAAAAAACACGACAGGAGATGCTTTGAATAGCACTTAAAAGACAGGCCTccagaaaaacagaattttttattttaaatgacgATTTGTGTACTTTACACAATAATCACATCACTTAGTCCTGTTTTTGTCATcttgtattatgtattaataatcgTTGCCTGAATTAAGCAAAAATTATTTGGTCTTGGTCTAGATGTTGGTCTTTTATTGCGTTATAAGTAACAGgagtatgaaatattaatttttttaaatcttgataTTGTGTAAATAACAGATTTCTATATTACTGCATAATGCATTTATGAGTGTTTAgattaattgtaaatgtttgcattacatgaattatattaaaatctaaatggtTAGATCTTTCATACTGTCAAACTGTGAACAATTAaggtattataaaaaatgtatttggatTTCCATGATTGAATTCAATAAATTTTAACttgaaaatgca

Function

NR:

description
PREDICTED: protein asteroid homolog 1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043260711.1 True 2662 mRNA 0.42 6 20736949 20741672

Neighbor

gene id symbol gene type direction distance location
ubxn11 LOC107600501,LOC107592913,LOC107713843,LOC107668295 coding downstream 30619 20699997 ~ 20706330 (-)
mtdhb LOC107666798,LOC107717360,LOC107600499,LOC107668302,LOC107592090 coding downstream 50072 20681425 ~ 20686877 (-)
si:ch211-225p5.8 LOC107686707,LOC107592124,LOC107666781,LOC107719166,LOC107737837,LOC107600541 coding downstream 129047 20604089 ~ 20607902 (-)
fli1rs fli1b,LOC107600493,LOC107719147,LOC107666785,LOC107685964,LOC107592185 coding downstream 144122 20580282 ~ 20592827 (-)
si:ch211-215k15.4 LOC107666815,LOC107600540,LOC107719123 coding downstream 345083 20389474 ~ 20391866 (-)
si:dkey-11p23.7 si:dkey-11p23.7,LOC107717350,LOC107666731,LOC107600543 coding upstream 22966 20764638 ~ 20767365 (-)
LOC122360416 nek11 coding upstream 84556 20826228 ~ 20866224 (-)
LOC122360415 LOC107592535,LOC107666756,LOC107686539,LOC107709748,LOC107556976,LOC107733997 coding upstream 296851 21038523 ~ 21039535 (-)
LOC122360412 nek11,LOC107666729 coding upstream 314628 21056300 ~ 21102468 (-)
LOC122360714 NA coding upstream 361055 21102727 ~ 21105217 (-)
G114924 NA non-coding downstream 11278 20724171 ~ 20725671 (-)
G114908 NA non-coding downstream 56728 20677054 ~ 20680221 (-)
G114888 NA non-coding downstream 159675 20576686 ~ 20577274 (-)
G114853 NA non-coding downstream 216823 20500520 ~ 20520126 (-)
G114804 NA non-coding downstream 250822 20485895 ~ 20486127 (-)
G114943 NA non-coding upstream 27072 20768744 ~ 20769087 (-)
G114947 NA non-coding upstream 40131 20781803 ~ 20835235 (-)
G114997 NA non-coding upstream 376477 21118149 ~ 21120584 (-)
G115042 si:dkey-22o22.2,LOC107668308,LOC107713796,LOC107592533,LOC107666790,LOC107717379,LOC107600533 non-coding upstream 541792 21283464 ~ 21314746 (-)
G115051 NA non-coding upstream 589340 21331012 ~ 21331358 (-)
G114901 NA other downstream 83375 20651977 ~ 20653574 (-)
scn1ba scn1b,scn1ba,LOC107666845,LOC107737825,LOC107719111,LOC107686587 other downstream 86012 20636125 ~ 20650937 (-)
G114793 NA other downstream 284499 20441965 ~ 20452450 (-)
G114715 NA other downstream 559191 20166795 ~ 20177758 (-)
dpys dpys,LOC107728457,LOC107686378,LOC107666745 other downstream 1079225 19596432 ~ 19657724 (-)
G115003 cpne4a,LOC107592564,LOC107600547,LOC107666882,LOC107713817 other upstream 270935 21012607 ~ 21017105 (-)
G115093 plekhf2,LOC107666819,LOC107600513,LOC107668314,LOC107591926 other upstream 634218 21375890 ~ 21378836 (-)
mettl6 mettl6,LOC107600537 other upstream 668287 21409959 ~ 21411772 (-)
trnae-cuc_38 NA other upstream 668288 21409960 ~ 21410031 (-)
G115116 NA other upstream 818549 21560221 ~ 21561216 (-)

Expression


Co-expression Network