LOC122360281 (LOC107666827,LOC107592432,LOC107719140,LOC107686285,LOC107714336,LOC107556964)


Basic Information

Item Value
gene id LOC122360281
gene name LOC107666827,LOC107592432,LOC107719140,LOC107686285,LOC107714336,LOC107556964
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056714.1
NCBI id CM032083.1
chromosome length 28146790
location 20055640 ~ 20060794 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043260734.1
TGCTCTGGTTTCGTAGCGCACGGACAATTTTAAAGTCCACAAGTGTGTGCGCTAAACCCGTACAAAGTCCTGTGTGGCTGTCGTGATCAAATTAACGTCCAAACGTGTTGTTTTAACGCCGACTTTATGTGACGGCGGGGAGTCGCCTGGCGATGATGTCACGACGTATAACACTGACAGCGGTGACGCCTGATGATCATTAAAAACTGCCATTAAAATGAGCGCAGATGATTATTGTGTTTACTGAGAGACGCATAAAAGAGCAGCGCGGTGCGCTCGGCCAAAATAACAGAGTAACGGAGACATCTGGAGCGAAAGATCCGATCGGCGTGGCATCTGTCCGGTCCATCCAGGGTTTTCCCCCCTCTACGTGCGGCGGGTCTCGGTCCGCCTCGCCTCCGCTCTTCCTGCCGCTGAACCGGGGGATACTCGAACCCAGAGCCGCGATCTGACGCTGAACCCCCCGGCCGGATGTTGAGCTCAAATCTTGGAATGGGACTAATGTTTAACATGTAAATTCAACCTCCTGAAGGTTCTGGCCagtttagattttctttttcacgTTCTCAAGCACAATGTCGAGCAGAAGGAAGTCCACAACCCCCTGCATGGTGCTTCCGTCAGATGTCGTAGAGCAAGATCCTGATATGGAGGCCCTGGAAGGGAATGAAGGAGCTGAGAGTATGGCAGACGGTCCTACTGAGGGAGCAGTGGTTCCCATGGAAACAGAGACAGAATATGAAGGGATCCATTTCTCGAGTGAGGACTGTCGTTCTTCAGGGAAACGCTCAGGTCAAACGCCACTAGAGCAGCCCATCTCTGATCTGACTGCTGAGGGTGGATTTGTGCAGACGGAGATGGAGGATAGTGATGACCCCTCAGTTACTGGAATCCCTCTCAGCAAGACTcctataatgaaaatgaaaagcaagTCTGAACCCAAGAGAATAGCCGTTTCTCTGAAAGGCACGAGTGAAAGCGAGGCACTAACTGAAAGTGAGATGGAACTGGAGCCCTTGGAAGCGTCAGTGATGGGCTCTTCCATGGCACCAGAACTCATGAGCCCATTGCTCACAGAGTGTGTAAAGCCCAGCGTTCTTGTCAATATTTCAAACCCTGTGGTAGCAGATCAGAAGAAGCTGGTTATGAACCCTGCCACGGTTCTCCCGGCCGGCTTGGCTCAAGTGCTTTCTGCCTTGCAGGCCCAGCAGAGCGCTCAAACACAACTTCTAATACCAGTAAGTAGTATTCCCACATATAATGCTGCAATGGACTCCAATGCAGTCCTGGTGAACACGTACAAGAAGTTCCCTTACCCATCGGTGTCTGAAATCATGGGACTTGCAGCCCAGACCAAGTTCAGTGAGGAGCAGATAAAGATCTGGTTTTCTGCTCAGCGTTTGAAGCATGGCGTTAGCTGGACCCCAGAAGAGGTTGAGGAAGCCAGGAGAAAGCAATTTAATGGCACAGTCCACACGGTTCCCCAGACCATCACAGTTATCCCGGCCCATCATCTTTCCGCCACTAATGGCCTGCAGTCTATTCTTCAGACTTGCCAGATTGTGGGGCAGCCAGGTCTGGTTCTGACACAGGTTGGCACGGCTAATAGTCTCCCAGTGACCACTCCGATAACCCTGACAGTAGCAGGAATGCCCAATCAAAGCCAGACTCCTAAGATCGCAACCAATCaaataagccctgcgctcagtGAAACTAAAAGAGCTACTACCATTCAACCCCCATCATTGACCCCTCAGGAGAACTCTGCACTCAGTGTAGATCATTTTGGTCTGCGGCCTAAGAAATCCAAGGAACAACTAGCTGAATTGAAAGCAAGCTATCTGAAGAATCAGTTTGCTAGTGATGCGGAGATAGCTAGGCTAATGAAGTTGACCAACCTCACCAAAGGTGAGATTAAAAAGTGGTTCAGTGACACCAGATACAACCAGCGCAATTCTAAAAACAGCCACGCCTTTATTGCGAATGACAATCCCAGGAGTAGTAGCAGTACCACTATTGTTATCGACTCTAGCGACGAAACGCCACAGTCTCCAACACCATCGCCCATCAAAGAGAAGGAGACGCGCGCCAAAACCTGGAACCCCTTCCCAGACTTTACCTTGCAGAAGTTTAAAGAAAAGACACCAGAGCAGTTGGTGGTCCTAGAGGAAAGCTTCCAGAAATGTGACACACCAACGGATGAAGAGCTCAGCCGGCTGAGGGCCGAGACCAAGCTCACCAGGCGTGAGATCGACGCCTGGTTCaccgaaaaaagaaaaacccctGTGCCTGATTCCGCAGAGTCGAAAGCAGATGGTGAAACATCCCAAAAGAAGGGGAGCCAAACTCCACCCGGAGGAAAGAGGCTGAGCAAAGAGAAGGTGACTAAAAAAACCCCTGAACAGCTTCATGTTTTGAAGACTGCGTTTGTTCGCACCCAGTGGCCCTCGACGGAAGAATATGACCAGTTGGCTGATGAGAGCGGACTGCCTCGGTCCTACATTGTCAACTGGTTTGGCGATACACGCTACGCCTGGAAGAATGGCAACTTGAAGTGGTATTTTTATTATCAGAGTGGAAACGCAGGAGGAACGAATGGCAACAAAAGCAGAAAACGGAGGATTCGGAATCGCGGTTGGGGAAGAACCCGTAGTAGAAAAGCGAAGAAGCACACAGAATTGGAGAAGAATTTGCCAATCCGGTTCAAGTCTGGACGGGATATTCTGAAGGAGTACTACTTGAAGCACAAGTTTCTGAACGAACAGGACTTGGACGAGCTTGTTGCTAAGTCTAACATGAGCTACGAGCAGGTGAGAGAGTGGTTTGCGGAGATTCATCGGAAGGAGGATATGGGTACCAACCCGTTTGAGGATAAAACGGGAAATGAAGAAcaagatgaagaggaagaagagtCACATGGTGAAAATGAGACGGCGGTGGAGGAGCAAGGACCTGCTTTGGGAGATGAAGaaggtgatgaagatgatgacgaCACTGATGACAGCGATGCCTGGGAGCCTCCGCAGAGTGTTCGAAAAACATTGTCTGTGTCTGAGGGTCAGTGATCTTTCTAAATTGGCTTTATTCTGAGCAATGACCCTTGGTGAAAAACCATGACTCTTTTGGGTCTCGACCACATGCCCTCTACCACTGCAccaattcttatattttatgtagTTTCACGTAAGGTTTAATAAGACCTTTTTagcaaaaacattgtttttgatCAGAATGTTTGACTGCATTCAAACCTTGAGAAATCATGCACAAataacagggttttttttctgcgGCTCTGAAGTGCAGCAATAACTAACCCAAGATCCCTGGATTAGTAGTAATCATGTTATCATGCATAGAATTTGAACTTCTGTCTACCAGAATTGGTCATGCACCTTAACCCATGTACATGCAAAGACATCCTAGGCCTGTAAAAGGTCTTTTAAATgggctttttttcatttggagTCAAATGGAGAATACTTAGTGCCAAAGGTATAGTATTGAATGTTATTGTTCCCTTAATAATGGACACAGTAGCTAATTAAGGGAATATGCATGAATACATTGTGTCAATTAGACGCATGAGGCACTTTGTCAACCTCCGTGATGTAcggaacttaaaaaaaaaaaaaaaaaaaaaaaaaaaaacaaccagcCACCTTATTTATGTAGGGCGAGACCAAACATTTCAAATCGAATTTCCAAATTCAGTGACACAAAGTGTTTTATCTTTCATTCCCAGTGTTTTTTCAACATACTAAGCATCAATATCTGGTAAACAGCATAGTACATCCTAACAGGAAGTTGTAGGTGTTCCTGTAATCCTGCTGACAGCCATTGTGGGGGGTCATCTTCAAACAATAACAGCCAATACTCATCTTGTGGGCAAACTTATTTTGTGGACATGGTTGTAATAAACAGGTGATGTGact

Function

NR:

description
PREDICTED: zinc fingers and homeoboxes protein 1-like

GO: NA

KEGG:

id description
K24879 ZHX1; zinc fingers and homeoboxes protein 1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043260734.1 True 3935 mRNA 0.47 3 20055640 20060794

Neighbor

gene id symbol gene type direction distance location
LOC122360280 atad2,LOC107719139,LOC107666826,LOC107686264,LOC107714334 coding upstream 228 20045288 ~ 20055412 (+)
psma2a psma2,si:rp71-45k5.4,LOC108440756,LOC103045926,LOC107686300,LOC107592434,LOC107714337,LOC107724313,LOC103023870,LOC108425697 coding upstream 10848 20041536 ~ 20044792 (+)
zmp:0000000930 zmp:0000000930,LOC107719165,LOC107666769,LOC107592532,LOC107686330,LOC107714340,LOC107556967 coding upstream 19502 20034132 ~ 20036138 (+)
oxr1a oxr1a,LOC107592439,LOC107714343,LOC107666800,LOC107719142 coding upstream 43281 19897786 ~ 20012359 (+)
zfpm2a zfpm2,zfpm2a,LOC107592441,LOC107719156,LOC107556951,LOC107666743,LOC107714317 coding upstream 190546 19726156 ~ 19865094 (+)
washc5 kiaa0196,strumpellin,LOC107666741 coding downstream 1982 20062776 ~ 20074718 (+)
cldn12 cldn12,LOC107686255 coding downstream 39063 20099857 ~ 20104314 (+)
slc25a40 slc25a40,LOC107666862,LOC107592430 coding downstream 73247 20134041 ~ 20139103 (+)
LOC122360562 LOC107719162,LOC107666880,LOC107592425 coding downstream 98399 20159193 ~ 20166118 (+)
si:dkey-7j14.6 LOC107719161,LOC107666753,LOC107714322,LOC107592973 coding downstream 106001 20166795 ~ 20169252 (+)
G114589 NA non-coding upstream 15052 20038574 ~ 20040588 (+)
G114585 NA non-coding upstream 26008 20026841 ~ 20029632 (+)
G114582 NA non-coding upstream 37469 20016710 ~ 20018171 (+)
LOC122360959 NA non-coding upstream 45547 20009553 ~ 20010093 (+)
LOC122360931 NA non-coding upstream 335711 19702725 ~ 19719929 (+)
G114593 NA non-coding downstream 19079 20079873 ~ 20082046 (+)
LOC122359979 NA non-coding downstream 174204 20234998 ~ 20242544 (+)
G114707 NA non-coding downstream 352763 20413557 ~ 20413889 (+)
LOC122360972 NA non-coding downstream 353416 20414210 ~ 20422189 (+)
G114813 NA non-coding downstream 525266 20586060 ~ 20586827 (+)
LOC122360533 dcstamp,LOC107556953,LOC107592504 other upstream 407834 19643829 ~ 19647806 (+)
G114382 NA other upstream 726877 19327104 ~ 19328763 (+)
fxyd3 fxyd1,plm,LOC107592153,LOC107728489,LOC107592449,LOC107665652,LOC105891849 other upstream 762759 19283761 ~ 19292881 (+)
fxyd11 NA other upstream 772125 19280383 ~ 19283515 (+)
G114352 LOC107726675,LOC107592148,LOC107665654,LOC107592451,LOC107728449 other upstream 802594 19197804 ~ 19253046 (+)
hjv hfe2,LOC107719159,LOC107666758,LOC107714319,LOC107592274 other downstream 158850 20219644 ~ 20227077 (+)
slc4a7 slc4a7,LOC107666816,LOC107686077 other downstream 206747 20267541 ~ 20304684 (+)
siglec15l NA other downstream 706484 20767278 ~ 20770392 (+)
tgfbr2b tgfbr2,LOC107730143,LOC107600517,LOC107551196,LOC107713826 other downstream 1789195 21849989 ~ 21872972 (+)
stt3b stt3b,LOC107668300,LOC107666808,LOC108434203,LOC107713794 other downstream 1823115 21883909 ~ 21921531 (+)

Expression


Co-expression Network