leng1 (leng1,LOC107552839,LOC107716812,LOC107587899,LOC107704929,LOC107711733,LOC107700768)


Basic Information

Item Value
gene id leng1
gene name leng1,LOC107552839,LOC107716812,LOC107587899,LOC107704929,LOC107711733,LOC107700768
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056714.1
NCBI id CM032083.1
chromosome length 28146790
location 23281818 ~ 23284256 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043260949.1
TGTTTTCGCTACGCCCTCGTGTGGAAGCCTACATGTAGTGCGTGACTATTTAATGCGTCACAACCCTCTTACGTGTGACGTAATTACGCCGCGGCAACTTCCGGTGTTTGCAAAGCACTCTTTCTGTACCACTGAATCGGTATATTGTTTTCGAAAGCTGTTCTTTTTGCGTTTTTGTGATCATTCAGAATGGAAGACGCGGGTCTAATTTACATAGGGATTCAGTGGCGAGTTTGAATTTCGCTGCGTAAGTTAGTTTGTTGACGAGTCTGTTTGTTGTTAGCCATAAACTAAGGTGTTGCCTTGTGTATTAGACTTTGTATGAGGCTTGACAGACTTGCTACGAGAATAGAactacatttgtttgttttactgttcTCTTAAGTATTGCATAATGAACATTTTGCCCAAAAAGAGCTGGCATGTGCGCAATAAGGACAACATTGCGCGCGTGCGCCGCGACGAGGCTCAAGCTGCAGAGGAGCAACGCGAGATTCAGCAGCGTGTGGAACGCGCTGAGCAagagGCTCGAACTGAGTATTTGAGAAAGAAAGCTCAAGCAGCCCTTCAGCAGACAGGAAAATGGACAGAGGATGGAGAGGCGGCAGAGACAAGCCGGGGAGCCAGAGAGATCGAACACTTAAATCTGTTTCCTCTTGAGGACTCGTctgaaaagaaaggaaatgcAGAGTATCTCAAAGAAAAGAAGGAAGAGAAGgagaagCAGGAGCGTGCTATTGGTCTTCTAGTGTCTCTAGGTCCGGCTCCTGGAACAGAAGTAACACCCTGGTACCTGAAaggtggaaaagaaaaagaagaagatatAGACAAGAAAGAGAAAGGCAAAAACAAACCAAGAACCATAActgaagaggagagagaaaagaaagacaggAAGCTGAAAGACAGCTTGGATCCCCTGAAAGAGATGAAGAAAGCACTGGCAGTGAAGGACAGGAAGGAGAAAAAGCataagaagaaagagaagaaagacagaggagagaagaggagtGGAGAGAGTTCAGTTGAGAGGTTACGGGCTGAACGGCTGCAAAGAGAAGCGGAGGAGAGGAAAAGGACACAGGCTTTACTGGATCAGAGAAGTGGAGGcgggaaagaaaaagagcacGAACGAGAGATGGGGGATAGAGACAGACCATACAACAGCGCCTACTTTCCTGAATTGGCACGGAAAAGGCAAAGGAGAGACAGAGATCAGTATGGCTTTTATTAGCTTACAAAGGCATTGATTCAATAAGTGTCGAAATTGCAAAACTGTTTTGCGGTCGGACAAGAAATTAGCCACGTGCAAAGTGTGCAcaccatttaaaatgactgattgCTACCTAAATGCCATCGATCTGGCCTCTgaaacacttttattggcatCGGATCACTGGGGGGAGggggcacaaaaaaaacaaaaaaactcctTTTTGTTTGTGCTCAGAGCAAAGGAGTGATTAAGTTGTAGTAAAAATGTCGTCTTATGATATGTAGGGTCTATATCAGAGTTGTTTTGTTGAACAATTCAGAGCTATCAGCATTACAATGTGGACAAGCCATTATtgtgagacattttttttctatgttgGTGATATTGGAAtccataaaatgttttgttctcgTTGTGTCTAAACAATTAGTTTTCCTCTGGTATTGCATAGCTGGGCTACACTGCAACAAGTCTGGTTCATAATGCCACATGTTACTGTTCCAATTTAATGGTAAGATGATATGTACATGACTCTGAATAGGACATTGCAGAATCACACACAAGttcttattaataaatgaagttTTGCAAATATGTTCATCA

Function

symbol description
leng1 Orthologous to human LENG1 (leukocyte receptor cluster member 1).

NR:

description
PREDICTED: leukocyte receptor cluster member 1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043260949.1 True 1819 mRNA 0.43 4 23281818 23284256

Neighbor

gene id symbol gene type direction distance location
tmc4 tmc4,LOC107711726,LOC107700770,LOC107552843,LOC107579598 coding upstream 124 23273926 ~ 23281694 (+)
mboat7 mboat7,LOC107587783,LOC107716833,LOC107711731,LOC107700769,LOC107552840,LOC107704925 coding upstream 8026 23267510 ~ 23273792 (+)
phc1 LOC107672038,LOC107714597,LOC107724796,LOC107552845,LOC107587786,LOC107704919 coding upstream 38054 23234457 ~ 23243764 (+)
atn1 LOC107714603,LOC107587791,LOC107704916 coding upstream 84096 23185028 ~ 23197722 (+)
mlf2 mlf2,LOC107671951,LOC107704913,LOC107724787,LOC107714604 coding upstream 100389 23176824 ~ 23181429 (+)
lmtk3 LOC107716834,LOC107704931,LOC107587782,LOC107711732,LOC107700767 coding downstream 787 23285043 ~ 23300830 (+)
prpf31 prpf31,LOC107700766,LOC107552837,LOC107711734,LOC107704928,LOC107587780,LOC107716835 coding downstream 17011 23301267 ~ 23306068 (+)
sphk2 LOC107704932,LOC107716839,LOC107711736,LOC107552834,LOC107700765 coding downstream 31686 23315942 ~ 23328023 (+)
gprc6a LOC107716809,LOC107587859,LOC107711720,LOC107552792,LOC107704834,LOC107700677 coding downstream 45967 23330223 ~ 23336839 (+)
LOC122360146 LOC107716840,LOC107704933,LOC107587774,LOC107700761,LOC107552831 coding downstream 63722 23347978 ~ 23352600 (+)
G115462 NA non-coding upstream 15349 23265472 ~ 23266469 (+)
G115422 NA non-coding upstream 138360 23141073 ~ 23143458 (+)
G115420 NA non-coding upstream 172785 23108123 ~ 23109033 (+)
G115416 NA non-coding upstream 186408 23091343 ~ 23095410 (+)
G115371 NA non-coding upstream 203942 23052420 ~ 23077876 (+)
G115706 faxcb,LOC107587769,LOC107704942,LOC107716849,LOC107700756,LOC107711729,LOC107552822 non-coding downstream 251224 23535480 ~ 23559924 (+)
G115714 faxcb,LOC107700756,LOC107716849,LOC107587769,LOC107711729,LOC107552822 non-coding downstream 271365 23555621 ~ 23568054 (+)
G115718 NA non-coding downstream 288717 23572973 ~ 23576648 (+)
G115730 NA non-coding downstream 381010 23665266 ~ 23677259 (+)
G115747 pnrc2,LOC107597121,LOC107700745,LOC107704949,LOC107716857,LOC107587761 non-coding downstream 433595 23717851 ~ 23815099 (+)
G115449 NA other upstream 27252 23251382 ~ 23254566 (+)
rps9 rps9,LOC107587787 other upstream 57890 23222050 ~ 23223928 (+)
wnt4b wnt4b,LOC107704912,LOC107552850,LOC107587793,LOC107671942,LOC107724774,LOC108443656 other upstream 112141 23164566 ~ 23169677 (+)
LOC122360203 LOC107704907,LOC107714612,LOC107587796 other upstream 165003 23110283 ~ 23116815 (+)
LOC122360067 calb1,LOC107704882,LOC107588486,LOC107556079,LOC107700706,LOC106580458 other upstream 306044 22964569 ~ 22975774 (+)
tstd3 si:dkey-165n16.1,LOC107700689,LOC107704863,LOC107716817,LOC107587896,LOC107711730 other downstream 325192 23609448 ~ 23612393 (+)
cnr2 LOC107716825,LOC107587892,LOC107704869,LOC107700673,LOC107597120 other downstream 531668 23815924 ~ 23822446 (+)
LOC122360598 NA other downstream 1489563 24773819 ~ 24832618 (+)
G116057 NA other downstream 1719006 25003262 ~ 25057168 (+)
G116099 rab5a,LOC103388351,LOC105904716,LOC101157247,LOC108411561 other downstream 2268607 25552863 ~ 25554807 (+)

Expression


Co-expression Network