LOC122360453


Basic Information

Item Value
gene id LOC122360453
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056714.1
NCBI id CM032083.1
chromosome length 28146790
location 19293027 ~ 19296789 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043261070.1
TCCTTTCAATGCATGCGAAATGTTTTGAAGAAGCTATATGAAGCTAGATAAAACAGTGGCTGGTAGAACGGTCAGAAAACAGCTACAAAGACCAAGATTTACTCAACAGCTCCCTCTACTCTCTTAAATGTTTAGCCATTACACAACCAATCATAAACATGCAACTGTCAGTATTGATTTCAATGAGAAATAGCTATGTTTGCACACATTTAGATTTTGGCAACGTAAGTTACAGTTAACTCTCAACATTTTCGGGATTAACAACCATGTgctgaaatgcagttttacataAGTGACCTTCAGAAACTAGTACTTATTCATATATAGAATCGGTTTTAGTTCAGTCATTTGTTTTAGTAGGCTACATTAAGTGAAAAATGCCAAATGTTGCCTTTGAAATGAGCTGAAACaagtttttatatgtatatttaatttctacCGATGTTTAGTtagtataataaaacaaatcagacCATTGAAGGAAGAAAGAATCTgttattatcatttatcataCTTGCATTTTACAAAGGAGGTTTTGATCGTTTTGCAAACATGGAAGAACAGTGGCGTTGCGTGgttgtaaaaagtaaataataataaaaaaatgttctgattatatcagagagaaagagagtggaAGTACTGGAAATTgcctacatttttttagttttgtataaAAGTTTTTGCAGTTTAAATTGTTGTGATGAAGCATAAATTCGGTGGTCTGCTTATCTGTGTGCACAGCCTGGATGCagtctactgtatgtgcaagcACACACTCATTGGTACAAGGTGGTTTTGGTTAGGTTTCAGAGAAACGAAACCTCAGGATTAGAGCTGGTTTACCACTTCACTGTCATAAGCAAATCTAGATCCATCCTACGCTTTCTTCAAAGACGTCACAAACTAAACGGAGGATATTGTGGACTTTCCAAAGAAATGACTTTGAAAAGATGATTCAGTTTTTAGAAGGCGGACTGCTGGATTTCTGAGGTGGCCGATGGAAAGTATTACTTGTGAACTTTCATACCGATTAGGCTTGCCACGATATTAGATTTTTCACACCACGGTTATTGTGCCCAAAAGAAAACTTTGGGGAAAAACTTtagcattcaaatatttttatacttgtctatttagcatttattttgtacCCATTCAACAAACATAAGGAGGCAGGTAGACAGGGCGCATGCACTCTGGGTTTCTCAGTCTTCTTTAAAGAGCCCtatgaaattacaaaatatgtataaaagaTTTATAGAGCACTGAAGTGTGCCAGACGTgaattgaaattgtattttttcacAGAGGGGTATGGTGTAACCCTGGTCCGCGTGTGAAGACGATGCGCAGCGCTAATCACTGAATAAATGTTCCCAAGTGAAGTGAACTTCACGGATTCACCCTCATCAGGGAGTAGGGAGCAACGCTGTGTAGCGACCATGTCAATCGGAACACAGTTCATGCATAATCTGATGATCAGAAtcggtgttaaaaaaaaaagagatacatAACATGCAGAGCGGAGGGTATGCGAGGACTGCTGCTCTACGGAGAAGTTTCTCTGAAGTCGAAAAACTCTCATGGTGGCGAGCTTACTTTTTTCGAAACGTGGACAAAACCTCGTGCGGCGTGACTCTCGCGTGCGCGCGCACGCGCGCGCTGCGTCTTCTTCTCGTTTAACAGCGGGCGTCTGCATTAAGGTGCAATACTGCCACCTGGGAGATCAACCGGGGACTAGCTGGGGATACGGGTTGTCGTAAGAGTCCTGTTCGGTTATCGCCAAAATAACGTCGATGTCGATATTTCACGGTTTTATCGCGCCACCCCTACCGTTTTGCGTCACCACATTCAATATCGATCTTAAATACAATGTGAGCGTTCAGTTAAAGATTCTGAAGCAAGACCAGTCAAGATCTGCTATTCAAAATGCACCATAAATAGCTCATATTATTGGTGAAACTTTAAATGACACAGGATAACTGTGGTTAAACAAAAAAGTAGGccgctttttttctttcttttttttttttttacctcaacCCATTACCTTTCACCATAAAAGGATGCTGAGAAAAGTCTCTCAGTATTCGATCTGAAAAGCAAAGTGCCTTATCTAAAGAAGAAGGGTAGACAAGATCAGATATGGACCAAGCTTTTGCTCCAGTATATGCTCAGGCTGGTAGTAACGGATGTCTTCATGCAGTCCATCCCGTGAGCATCCAGCTCCATCCCCATGTCCTGAATCAACACAACCAGCCTGTGGTCATTGTTCAACCCTCTGCGAACATGAGGCACCAGCCACAAGCCAAGCCTGTGCCGGATTACATGGGTTACTCCATATTTTCCACGCTGTGCTGCTGTCTCTGTCTGGGACTTTGTGCTCTTCAATACTCTCGAGAtACTCGCTCTGCCAATGCTGCTGGACAGAGAAGAGAAGCTGCGAAAAGCTCTCAAACTGCACTCATCCTGAACCATGTCGCTGTTATTGTGGGAATCATCCTGCTTGGAGCATATGTCTTAAACACGTTTTACCTATCAGGTCAAACCGATTCGTAGTTATCTTCCCAAAGATACATCCCATCTGCTTTTCAAGCAAATTTGGTATTGTACACTCCTGTgcaattttatcttttttttggttctctTTGCAGATCTGGATAGTTTTATCATTACGTTACACATTGCAATACGCTTAAACgtgcaaaattatatttttcaatctttttattttttactaattggtattaaaaaaaagtttcaatagACAAATAAAGGTAACTGTATTGTTGTTTAATGTACTGCATAAACGCTTCAAATGTAGCCACAATGGATTTtaagaatattcatttttaatctttgttttcTCGGAAGTCTCAATAATCTATGATTGACCTGATATTTGTGAATAATAAAGTccattaacaatataaaaaaaccttttttg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043261070.1 True 2950 mRNA 0.39 2 19293027 19296789

Neighbor

gene id symbol gene type direction distance location
hpn hpn,si:dkey-33i11.3,LOC107728492,LOC107726693 coding upstream 19756 19262614 ~ 19273271 (+)
si:dkey-33i11.1 si:dkey-33i11.1,LOC107666767,LOC107726681,LOC107728459 coding upstream 33424 19251356 ~ 19259603 (+)
rgl2 rgl2,LOC107666852,LOC107726673,LOC107665651 coding upstream 52388 19214486 ~ 19240639 (+)
ntrk1 ntrk1,LOC107688245,LOC107592455,LOC107592146,LOC107671431,LOC107728446 coding upstream 240411 19029066 ~ 19052616 (+)
LOC122360019 ntrk1,LOC107728446,LOC107592455,LOC107688245,LOC107671431,LOC107592146 coding upstream 279788 19002551 ~ 19013239 (+)
LOC122360927 LOC107666765,LOC107728460 coding downstream 8720 19305509 ~ 19307500 (+)
LOC122360047 LOC107666749,LOC107686570 coding downstream 12583 19309372 ~ 19311747 (+)
LOC122360969 NA coding downstream 26242 19323031 ~ 19325543 (+)
LOC122360278 LOC107728464,LOC107666853,LOC107728467,LOC107666779,LOC107686805,LOC107592514,LOC107728451,LOC107666749 coding downstream 45550 19342339 ~ 19348454 (+)
LOC122360279 LOC107666755,LOC107728493 coding downstream 55317 19352106 ~ 19354160 (+)
G114345 NA non-coding upstream 44707 19245933 ~ 19248320 (+)
G114354 NA non-coding upstream 87063 19202394 ~ 19205964 (+)
G114328 LOC107688248,LOC107665647,LOC107592452,LOC107592176 non-coding upstream 136960 19095730 ~ 19156067 (+)
G114316 syngap1b,LOC107592176,LOC107688248,LOC107592452 non-coding upstream 180300 19068602 ~ 19112727 (+)
G114299 NA non-coding upstream 313155 18977551 ~ 18979872 (+)
G114379 NA non-coding downstream 11475 19308264 ~ 19309214 (+)
G114520 dpys,LOC107728457,LOC107686378,LOC107666745 non-coding downstream 351115 19647904 ~ 19648864 (+)
G114556 NA non-coding downstream 382594 19679383 ~ 19679686 (+)
G114558 NA non-coding downstream 385351 19682140 ~ 19682452 (+)
LOC122360931 NA non-coding downstream 405936 19702725 ~ 19719929 (+)
fxyd3 fxyd1,plm,LOC107592153,LOC107728489,LOC107592449,LOC107665652,LOC105891849 other upstream 146 19283761 ~ 19292881 (+)
fxyd11 NA other upstream 9512 19280383 ~ 19283515 (+)
G114352 LOC107726675,LOC107592148,LOC107665654,LOC107592451,LOC107728449 other upstream 39981 19197804 ~ 19253046 (+)
LOC122360132 NA other upstream 451443 18827254 ~ 18841584 (+)
LOC122360692 NA other upstream 471891 18808744 ~ 18821136 (+)
G114382 NA other downstream 30315 19327104 ~ 19328763 (+)
LOC122360533 dcstamp,LOC107556953,LOC107592504 other downstream 347040 19643829 ~ 19647806 (+)
hjv hfe2,LOC107719159,LOC107666758,LOC107714319,LOC107592274 other downstream 922855 20219644 ~ 20227077 (+)
slc4a7 slc4a7,LOC107666816,LOC107686077 other downstream 970752 20267541 ~ 20304684 (+)
siglec15l NA other downstream 1470489 20767278 ~ 20770392 (+)

Expression


Co-expression Network