zmp:0000000951 (LOC107592442,LOC107728471,LOC107666810,LOC107709755,LOC107556960,LOC107666812)


Basic Information

Item Value
gene id zmp:0000000951
gene name LOC107592442,LOC107728471,LOC107666810,LOC107709755,LOC107556960,LOC107666812
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056714.1
NCBI id CM032083.1
chromosome length 28146790
location 19480366 ~ 19483890 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043261241.1
taaaaaaaaaattcattggAATTTCACAAATGGAGTAGTTTGTTTGAAAGAACAACTGTGGAGATAAATGGGTTAAATGGAATTAAGCACACAGTGATGCTTTAACAAACTTAAAACGCCCTGAGAACTGTTTACAATGTCATCTGGAAACCTTGTCAAACAAAGTGTTGACTTTAGCACAGCTGACTGTCCTGCAAACACACTCATCCAGGAGAACTGAAGAACGGAGGACGCACTTCTGCAGCTTGTTCAGAAACGGGTACAACTGAAGATGGAAGAAAAACTTTCAGATGAAAGAGTGAAATGTATGCTCGCTCCTTGGAGGTTTTCCATCAGGGCACCTGGATTTGAAAACAGGCTGGTGACTGCTCTGCAACTGTTTGAACGTTTCCCTTTAGATATAGCTGTGACCGGAGGAACACCGGAGGCTAATGCTCAGCTGGCATCTGCAATCTGTGGGCCAAGTGAGGAAATCGAAGAGGAGGAATGGGAAACTGATGATGAAGGTGATGAAGAGGAGGAAACAGATGAGGAAGAAGAATCAGAAGATTGCGAAGACAATGAAAGTGCAGATGAGGAACACAATATAAATTCGAATTTAAATACTAATTACCAGCGCAGTAGCAAGAGGAAATGTGTTCGGATAGCAGAGCATGCAGAATATATAGGGAGTGGCGTTCCTGATTTTGACTCTGTGATTTTACACCGTCAAATCCCAAATGTTCGTGTGTGGACCGTGCAGGGCCATCCAACTTCAAATTCCATCACTAAGCAGATCAACCAGCAGTACGACTCCAGATGCTATGATGTTCTGGTGGTTCTCTCTACAGAACAACAGAAGGAGGACCACATGTGGCTCAAAATGGAATTGCATGGCAGAGATCTGCCTTTTTTTCTGGTTCAAGCTGATCGGGACTGGGACGTGGTCGAGGAGAAGCCTACAGGGCCGTGCATGACCTGCGCCTGGGAACGAATGAGAGTTCGTAAGCTGGAGTtgcagaagagaagaaaagaagtaTTTGGAGAGACGGCTGATTCAGAAGCAGATGACCAGAATCCTTCAAACGCCACCCAAGATCCAGAGTTAGTGAAGTTTAAGGATATCGCCAAAGTGCTTGCTGAAGCCCTGCCTGAGCTTCGGAAGAAGGCTTTTAGTCAGTTTCTGGTGGCGATTACAAAGGAACTTCGGATTCCTAAATTACTGATTGATGACACACAGTTTGTGGTCTATACTGCTTTGCGGTCCAGGAAGATAAACCAGAGTGATCTTGATCAGATCACCAAGCTCTCGCAGCCGAGAGACCTCACAGACAATCCTTCCAAGCTTCAGACCATCCTTGCAGCTCTCGATCACTTCCGACTGGATATCGGTGTGCTGGGTGAGACGGGCTGTGGCAGCTCCAGCTTTGTCAATGCCCTCTTGGGCCTGGAGGAAGGTAATGAACAAGCTTCCTCAACTGGTGTCACTGAAACAACCAAAGAGGCTGTGAAGTATCCCTACCCTTCTCCTAATGTCCTGCTTTGGGACCTTCCTGGGCTTGGAAAAGTAGGTGATCTTGGCAGCCTGTCCTCAGCATCCATCTCTTCTGAAGCTCAACGCATGACATCTGCACTCTCTTTGTGTGATGTATACATACTGGTGTCTCCTTTGAGGCTTAGATTGGGAGCCATACAGTTGTTGCAGCAAGCATCATCTCTAGGGAAAGAATGTTACCTGGTGCTTTCCATGGCAGACCTGATTGAGGAAGAGTCAATTGTGAAAGTGAGGCAATGGGCTGAAGAAGTCTTGAGTAAACTTGGTCTCCAGCAGAGCTTATTTCTGGTGTCTGCTCACTATCCAGAAACCTTGGACTTACCCAAGCTAAAGGAGACATTGAATGCAGCCTTTCCAAGTCATAAGAAAGTTGCTCTTGCCAGATATGCAGCAAAGCAACTGGATGGAGATGTTTTCTGGAAAAGATCAGATTCTTGcaaatttatgtaaata

Function

NR:

description
uncharacterized protein LOC110512282

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043261241.1 True 1987 mRNA 0.46 3 19480366 19483890

Neighbor

gene id symbol gene type direction distance location
arhgap33 arhgap33,LOC107728480,LOC107666809,LOC107709693,LOC107686565 coding upstream 5268 19427483 ~ 19475098 (+)
rbm42 rbm42,LOC107709618,LOC107728490,LOC107666869 coding upstream 53135 19422401 ~ 19427231 (+)
ncam3 LOC107666890,LOC107686492,LOC107709588,LOC107728453,LOC107556979 coding upstream 63227 19406080 ~ 19417139 (+)
sult2st3 LOC107666756,LOC107592535,LOC107686539,LOC107709748,LOC107556976 coding upstream 86865 19390787 ~ 19393501 (+)
tmem147 tmem147,LOC107666831,LOC106605633,LOC107686556 coding upstream 92762 19383361 ~ 19387604 (+)
LOC122360535 LOC107728462,LOC107666770,LOC107592443 coding downstream 59 19483949 ~ 19487792 (+)
dcaf13 dcaf13 coding downstream 7265 19491155 ~ 19497727 (+)
rims2a rims2,rims2a,LOC107666746,LOC107728483,LOC108438094,LOC106919946,LOC106962152,LOC107556969,LOC107095553,LOC108256727 coding downstream 15391 19499281 ~ 19643486 (+)
zfpm2a zfpm2,zfpm2a,LOC107592441,LOC107719156,LOC107556951,LOC107666743,LOC107714317 coding downstream 242266 19726156 ~ 19865094 (+)
oxr1a oxr1a,LOC107592439,LOC107714343,LOC107666800,LOC107719142 coding downstream 413896 19897786 ~ 20012359 (+)
G114379 NA non-coding upstream 171152 19308264 ~ 19309214 (+)
G114345 NA non-coding upstream 232046 19245933 ~ 19248320 (+)
G114354 NA non-coding upstream 274402 19202394 ~ 19205964 (+)
G114328 LOC107688248,LOC107665647,LOC107592452,LOC107592176 non-coding upstream 324299 19095730 ~ 19156067 (+)
G114316 syngap1b,LOC107592176,LOC107688248,LOC107592452 non-coding upstream 367639 19068602 ~ 19112727 (+)
G114520 dpys,LOC107728457,LOC107686378,LOC107666745 non-coding downstream 164014 19647904 ~ 19648864 (+)
G114556 NA non-coding downstream 195493 19679383 ~ 19679686 (+)
G114558 NA non-coding downstream 198250 19682140 ~ 19682452 (+)
LOC122360931 NA non-coding downstream 218835 19702725 ~ 19719929 (+)
LOC122360959 NA non-coding downstream 525663 20009553 ~ 20010093 (+)
G114382 NA other upstream 151603 19327104 ~ 19328763 (+)
fxyd3 fxyd1,plm,LOC107592153,LOC107728489,LOC107592449,LOC107665652,LOC105891849 other upstream 187485 19283761 ~ 19292881 (+)
fxyd11 NA other upstream 196851 19280383 ~ 19283515 (+)
G114352 LOC107726675,LOC107592148,LOC107665654,LOC107592451,LOC107728449 other upstream 227320 19197804 ~ 19253046 (+)
LOC122360132 NA other upstream 638782 18827254 ~ 18841584 (+)
LOC122360533 dcstamp,LOC107556953,LOC107592504 other downstream 159939 19643829 ~ 19647806 (+)
hjv hfe2,LOC107719159,LOC107666758,LOC107714319,LOC107592274 other downstream 735754 20219644 ~ 20227077 (+)
slc4a7 slc4a7,LOC107666816,LOC107686077 other downstream 783651 20267541 ~ 20304684 (+)
siglec15l NA other downstream 1283388 20767278 ~ 20770392 (+)
tgfbr2b tgfbr2,LOC107730143,LOC107600517,LOC107551196,LOC107713826 other downstream 2366099 21849989 ~ 21872972 (+)

Expression


Co-expression Network